Os04g0577200

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Revision as of 11:24, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0577200| Description = Similar to Rac GTPase activating protein 1| Version = NM_001060165.1 GI:115460059 GeneID:4336743| Length = 3459 bp| ...")
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Gene Name

Os04g0577200

Description

Similar to Rac GTPase activating protein 1

Version

NM_001060165.1 GI:115460059 GeneID:4336743

Length

3459 bp

Definition

Oryza sativa Japonica Group Os04g0577200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:29504582..29508040

Sequence Coding Region

29504639..29505039,29506242..29506362,29506451..29506570,29506970..29507200,29507275..29507841

Expression

GEO Profiles:Os04g0577200

Genome Context

<gbrowseImage1> name=NC_008397:29504582..29508040 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:29504582..29508040 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgccattccagctgcgcttcggcctccggatgtccccctcgcgctcctccgacgaggaggaggaagacgacgaggacgaggaagggttcgagtacgaggagatactgagcgacgacgggacggactcgccgccgccgctgatgatgcaggcggagaagggagggggagggctggtcggggcggtggtgggggcgctgcggaggtcgctggtgatgtgcagcgccgggaaggtcggggaggaggaggacagcgaggacgaggaagaggaggggatggagatcgggcggcccacggacgtgcggcacgtctcccacgtcaccttcgaccgcttcggcggcttcctcggcctccccgccgacctcgagcccgaagttcccagccccacgcccagcgccagtgtaaatgtatttggtgtttcaccaacctctttgcaatgttcatttgatcacaaaggaaatagcgtgcccacaatactgttgatgatgcagaggaagttgtatgaacgagagggacttaagatcgaagggatcttcagaattaacgcagagaatagccaggaaatctgtgtcaggaaacaactaaacagtggtgtggttccagatgaggttgacttacactgccttgcagggttgataaaggcatggtttcgggaactcccaaccggtgtattggactcactgacaccggaacaagtaatgcattgcaacacagaagaggactgtgctctccttgcttcaatgctaccaccagtggaagccgcattactcgattgggctatcaatctgatggctgatgttgtggagcatgaaaactacaacaagatgaatgctagaaacatcgctatggtctttgcgccaaacatgactcagatggccgatccattgactgccctgatacatgcagttcaggtcatgaatttcctcaagacattgatcttgaagactttaaaggaaagagaggcagccggaacacctaagacaacggaaccatgctccggttctccaaacggacaagataaacctccgacgccagagaatttggagagacccatcatttgttcagatcagaaaggcatagataaacctatgtttgatatggctacttgtgatcagctgctgtttggacctaaacaattccttgatcatcgtgagaacaacaaatttgaaggaccggagaagcatgacataggccaaccgaagcgccatagcgaagcttctcctcttggtaatgattcgaataaccaagtcagcagccctggaaaagaatttggcaacagaaatgtggaaggcctgttcgacaaatttagttttaggaaaggtgtcgagaggctttgcaggcaccctgtgttccagttgagtaggtccatgaagaagtctgcagacgttgtggtctttgatgctcctggagaagcaagacaagcttggggtttgatatga</cdnaseq>

Protein Sequence

<aaseq>MAPFQLRFGLRMSPSRSSDEEEEDDEDEEGFEYEEILSDDGTDS PPPLMMQAEKGGGGLVGAVVGALRRSLVMCSAGKVGEEEDSEDEEEEGMEIGRPTDVR HVSHVTFDRFGGFLGLPADLEPEVPSPTPSASVNVFGVSPTSLQCSFDHKGNSVPTIL LMMQRKLYEREGLKIEGIFRINAENSQEICVRKQLNSGVVPDEVDLHCLAGLIKAWFR ELPTGVLDSLTPEQVMHCNTEEDCALLASMLPPVEAALLDWAINLMADVVEHENYNKM NARNIAMVFAPNMTQMADPLTALIHAVQVMNFLKTLILKTLKEREAAGTPKTTEPCSG SPNGQDKPPTPENLERPIICSDQKGIDKPMFDMATCDQLLFGPKQFLDHRENNKFEGP EKHDIGQPKRHSEASPLGNDSNNQVSSPGKEFGNRNVEGLFDKFSFRKGVERLCRHPV FQLSRSMKKSADVVVFDAPGEARQAWGLI</aaseq>

Gene Sequence

<dnaseqindica>58..458#1661..1781#1870..1989#2389..2619#2694..3260#atcctctccgcagtccgcacccgcgcgcgcgcgctcgactcccgcaccagccgcgtcatggcgccattccagctgcgcttcggcctccggatgtccccctcgcgctcctccgacgaggaggaggaagacgacgaggacgaggaagggttcgagtacgaggagatactgagcgacgacgggacggactcgccgccgccgctgatgatgcaggcggagaagggagggggagggctggtcggggcggtggtgggggcgctgcggaggtcgctggtgatgtgcagcgccgggaaggtcggggaggaggaggacagcgaggacgaggaagaggaggggatggagatcgggcggcccacggacgtgcggcacgtctcccacgtcaccttcgaccgcttcggcggcttcctcggcctccccgccgacctcgagcccgaagttcccagccccacgcccagcgccaggtgagctcgccggcgctaactctctgcaattcctctgtttcttctactcttcggtctctctctttcagttttctgaggattttacctgaaagaagctagtagctacgtactctacatacccaaatattctttggtacttgtatttttcaatttcacgcagtgtatttttcaatttcacgcagaaatatgtgttagtaaatttgttgttttatccttctctgttctgtgttctccaatgcaattagcgtataacctctttacaaaatatattgtgttcatagaaaggctcccaagaaagttgatagtactaatatgatgtttcagaacgatgatagtgagctttggtttcttttctagtatgtttagttgatcgctcagatgatacagggtagaaagagggcgatttgtttaaggatgtaagattaatttattccacaagtggatctagtaattaaaaaaggacaagtagtacctttttaataaaaagttcagttcttaattctagtatgcggttatatagttagattgctgagtcaagaagtacatgccatcaaacaaggaatggaagtatggaacactatgaaggtatgtgaaggtatacgattctgaagatatatgagggcataagagaagaataactcatatgtaggatttggtacaatactaccatatgacggccatgggttgaactttcaacggatcagacttgagttacttcgttctgtgcttgagctttaagcaacggggctgtttgaggtggttggccagcatgagcaacaaatgggaatcttcaaacctatcttttttattttggattagttctcctgtactttgcatcatcatatatagtaatgttctgtgaagtttgtccttttgcatttacaaatatcatttacaccatctttttaaggttgttaacgtcaaatcagtatttgatgtacaacctagttaaatgagctaggaatataagacattgtcctgttgctactgctgttatgtcataatctcttttttacccctttaacttgtagtggttacagaagtgaagattcaaagtttattcaccttaactacgatccttccctcctttttctttttcttttttaccgtgaaacagtaggggaggcctctaccgtatattaattttcgaaaagtttatgtacatgatacttaacaatttccatgtctaattttccatgcagtgtaaatgtatttggtgtttcaccaacctctttgcaatgttcatttgatcacaaaggaaatagcgtgcccacaatactgttgatgatgcagaggaagttgtatgaacgagagggacttaaggtatggccaccgcaacctaacgattagcattagaaaagtcagtattcaagccttcggaatacttatccattgtgttcttacttcttagatcgaagggatcttcagaattaacgcagagaatagccaggaaatctgtgtcaggaaacaactaaacagtggtgtggttccagatgaggttgacttacactgccttgcagggttgataaaggtagcatgaacttcctcatctctccttaatttttccggtccacggcctgagctgtatgaggcaaaaaagatcgttattatttatcggcaatttgctcttgtttgtttagtttttcagtactgagcattacctcagattgacagacgactaggcagttgcatctatgtatgtgcatcccctttttatgcaatctgaacatttcagaacctgaaatgtttgcagacatgaaggaatacagaataattggtgcaaggaacagtactttttaagtaaaaagtcgaataagtatttgcaggcaactgactattagatgtgcatgctattagtcatatttcttgtacatgggttattggcttactggaggatctattccatgatcactatattccctttttataggcatggtttcgggaactcccaaccggtgtattggactcactgacaccggaacaagtaatgcattgcaacacagaagaggactgtgctctccttgcttcaatgctaccaccagtggaagccgcattactcgattgggctatcaatctgatggctgatgttgtggagcatgaaaactacaacaagatgaatgctagaaacatcgctatggtctttgcgccaaacatgactcaggtattagaaacaactctggattctttcgttagaaaagcatacacatacactaacctgcaatgtttgttttccagatggccgatccattgactgccctgatacatgcagttcaggtcatgaatttcctcaagacattgatcttgaagactttaaaggaaagagaggcagccggaacacctaagacaacggaaccatgctccggttctccaaacggacaagataaacctccgacgccagagaatttggagagacccatcatttgttcagatcagaaaggcatagataaacctatgtttgatatggctacttgtgatcagctgctgtttggacctaaacaattccttgatcatcgtgagaacaacaaatttgaaggaccggagaagcatgacataggccaaccgaagcgccatagcgaagcttctcctcttggtaatgattcgaataaccaagtcagcagccctggaaaagaatttggcaacagaaatgtggaaggcctgttcgacaaatttagttttaggaaaggtgtcgagaggctttgcaggcaccctgtgttccagttgagtaggtccatgaagaagtctgcagacgttgtggtctttgatgctcctggagaagcaagacaagcttggggtttgatatgataatggttgtatatgtagttggtgtggatgtaatgctatcttttctctgtcttgtttgtgtgagcagaagcgattagcatgttagatttataggtgctgcaggttgttgtgtgcattataaccatttacttctgacgaaagcgtctgcctgtggctgctacaagtaaacgaaagccagctgaattctggctcagtactg</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0577200, RefSeq:Os04g0577200