Os04g0585300

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Revision as of 11:24, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0585300| Description = ARM repeat fold domain containing protein| Version = NM_001060212.1 GI:115460153 GeneID:4336790| Length = 6042 bp| ...")
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Gene Name

Os04g0585300

Description

ARM repeat fold domain containing protein

Version

NM_001060212.1 GI:115460153 GeneID:4336790

Length

6042 bp

Definition

Oryza sativa Japonica Group Os04g0585300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:29970128..29976169

Sequence Coding Region

29970416..29970616,29970954..29971059,29971153..29971210,29971329..29971440,29971628..29971801
,29972593..29972767,29972848..29972906,29973325..29973426,29973495..29973529
,29974334..29974428,29974955..29975003,29975071..29975129,29975295..29975368
,29975521..29975613,29975706..29976086

Expression

GEO Profiles:Os04g0585300

Genome Context

<gbrowseImage1> name=NC_008397:29970128..29976169 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:29970128..29976169 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggagatcgtcgtcggcgacggcggcgggaagtaagaagcggaggtccaaaaccggagctctaaccctaggggaggtgaagacgcttggcgaggagctcctctcgtcgcgcgccaacctcaaccacgcccccaccctcctcgcgctcctctccccctccgcgccgctggacctcgcgctggaggcgctcatctcgctccagtcgttcttcgtgcccctcctcccttccatcccctccgccgccgccacggccgccgcggccgcgggggatgcagaccccgagcttgtgtttaggtcctggttgcggaagcgtttcgacgagctcgttgcggcgctcgtcgagctcaccgtgtctccgcacagtgatgatgcaatcagggatctggcacttgatgcgctcatggatttcgtgaagctgggcaaggatgggagattccagtcggcaatttaccacaagtttatccacaatttgattcatgctaccgactcaattgatcctttgctagagttgcttggaccaaagtacttcatatacactgatgtttgttacttcacttacactagcttagacaagatcgccagcagtataggcaataaagccaccggttctgaaaagagtgtcttgcatagtggcgatgatgggccagaagacagaggcactatttatgtacgcaatatatacaatactttggcgcatattcctgccttggattttcaggagtcaaagtttaatatgtggagtactgttggcctttcttccaaaggagaaaagaactcatctgaggactgctctgctacttacattaacaaaaaactcaaatcaaagttcagcaaagcctggatatcctttctcaagctgccacttccgcttgatgtgtacaaggaggtccttgcaacaattcataagaatgtaattccttcaatgtcgaacccggccatcttgtgtgatttcttgactagatcatatgacattggtggtgttatcagtgtgatggccctaagtggtcttttcattcttatgacacaacatggcctggaatatccaaaattctatgacaaactctatgcattactgactcctgctgttttcatggcgaaacatcgggcagttttcttgcaacttctggatgcatgtctgaaatcttcatatcttcctgcatatcttgctgccgcgtttgcaaaaagattgagtagactaaccctttcagttccacctgctggcgctcttattattattgctttaattcacaatctactgcggagacacccgtcaataaattttttggtccattgggaaattgatgcaaatgattctgaaatctttaacgaagctagtcaacgtaagaaggttggcgctgatcctttcaacaatgaagagactgaccctgcaaagtctggtgcaatgcgaagttctctatgggaaatagacacactgcgccatcattactctcctgctgtttcaagattcgttgcttcacttgaaaatgatctcactgttcgggccaaaactactgagatgaaaataacggactttagttcaggctcctacgcaacagttttcagagatgaggtacgacggcggataaaacaagttccccttgctttctacagaactacaccaacttgtttatttcaagagtcagattttcctggatggacttttagggatcaattcaaaaacatggcagaaactagtgtagaaggcaatgggatcagtacggtagatattagccacagctcgtccgccaaaaggttgcggatggtgacctga</cdnaseq>

Protein Sequence

<aaseq>MGRSSSATAAGSKKRRSKTGALTLGEVKTLGEELLSSRANLNHA PTLLALLSPSAPLDLALEALISLQSFFVPLLPSIPSAAATAAAAAGDADPELVFRSWL RKRFDELVAALVELTVSPHSDDAIRDLALDALMDFVKLGKDGRFQSAIYHKFIHNLIH ATDSIDPLLELLGPKYFIYTDVCYFTYTSLDKIASSIGNKATGSEKSVLHSGDDGPED RGTIYVRNIYNTLAHIPALDFQESKFNMWSTVGLSSKGEKNSSEDCSATYINKKLKSK FSKAWISFLKLPLPLDVYKEVLATIHKNVIPSMSNPAILCDFLTRSYDIGGVISVMAL SGLFILMTQHGLEYPKFYDKLYALLTPAVFMAKHRAVFLQLLDACLKSSYLPAYLAAA FAKRLSRLTLSVPPAGALIIIALIHNLLRRHPSINFLVHWEIDANDSEIFNEASQRKK VGADPFNNEETDPAKSGAMRSSLWEIDTLRHHYSPAVSRFVASLENDLTVRAKTTEMK ITDFSSGSYATVFRDEVRRRIKQVPLAFYRTTPTCLFQESDFPGWTFRDQFKNMAETS VEGNGISTVDISHSSSAKRLRMVT</aaseq>

Gene Sequence

<dnaseqindica>5554..5754#5111..5216#4960..5017#4730..4841#4369..4542#3403..3577#3264..3322#2744..2845#2641..2675#1742..1836#1167..1215#1041..1099#802..875#557..649#84..464#ctctccccagcctcgccgcccggccgcacctcgtcccctcgcctcgccgccgcctcctcccccacgcgcgcggtcgtccagccatggggagatcgtcgtcggcgacggcggcgggaagtaagaagcggaggtccaaaaccggagctctaaccctaggggaggtgaagacgcttggcgaggagctcctctcgtcgcgcgccaacctcaaccacgcccccaccctcctcgcgctcctctccccctccgcgccgctggacctcgcgctggaggcgctcatctcgctccagtcgttcttcgtgcccctcctcccttccatcccctccgccgccgccacggccgccgcggccgcgggggatgcagaccccgagcttgtgtttaggtcctggttgcggaagcgtttcgacgagctcgttgcggcgctcgtcgagctcaccgtgtctccgcacagtgatgatgcaatcagggtgagtgctgctgcagcacctattcatttgtgtgctcggttgatggtttgatggtgaatggttcgattagcatgctcctttgttcactgtaggatctggcacttgatgcgctcatggatttcgtgaagctgggcaaggatgggagattccagtcggcaatttaccacaagtttatccacaatttggtgagtttttatcctctcatgctgttgcatcggtgtgaaattggggaaatactataatactagcagtatttaggggtggtttggctgagaagtgaactcgtggactagtttttactgttcgcttgctgctaagtttgcctgtttttgtgcagattcatgctaccgactcaattgatcctttgctagagttgcttggaccaaagtacttcatatacactgatgtttggtatgtcgtggtcaccttttgagtaatttttgctgtactttagtatctggtcctgataatcttaccttgagtgctttgctaacttgttctgcagtatttctaccatgcatttttttaatgttttcttgtaatatacttaattgttttctccatttgcttctgtagttacttcacttacactagcttagacaagatcgccagcagtataggcaataaagccaccggtaataccctctctcgttaaaaaatataacttattacaaactagttacctcattctattcttatcaggttctgaaaagagtgtcttgcatagtggcgatgatgggccagaagacaggtatgcttaagctcttttacatgatacatatattaagattggatgattgtgatcataaattcatagtattacctatggtaagatccaaccaatataccattgtgcattgcattaaatgagcgtttcaaatgcctgcacgcaaatgttttgcagtattgcttcgaaagaaaaaggtaagctgggaaagctttgttgttgttttacatgttcatgtgatccatctctgcctgttaaggaacaattggtactctgatgtgttgcttgtacttcatgcttgcatttctgtgttggtgtgttcttggaaagtacaatggcatgtgcttttcaaagttttacccctgcaatatcatttgaagacttgcaggtagtgatctatgttgtgaattattttgatcgtgtaattgtttgatttagatatcccataaaacacttgtagtgtgatttgccaatgtttatacatttctagtttttaacaactttcttagtcccatttatattcttctgatcttctctcttgctataacagaggcactatttatgtacgcaatatatacaatactttggcgcatattcctgccttggattttcaggagtcaaagtttaatatgtggagtactgttggtgagtcttttaactcttttgaaggctctattttccagtatgtaaaaatacttacagttgtccttttatacattgcattccctttttcatgtatgtccttatctattgaagaaccttgagacccattttctgttaggggtaggcagatataaaccattaactgaaggctgaacgaacttaagtagcagtttgtctggtggcaggtttggtttttataattggctgcttcggtgtttggttggaagatcagtacttatctcccgtaaatctcctataaaccgagcctcctgataaaaccgaggacagtgttctcaacagatagagcgcgtgggagaccgtgccctttcgtcgcatgatttttgctgacggtggctccacgcacacgccctcgcatgattcaagcagcggacccttgtgggatctggcagactactgcccaatggccatcacacataggtggggcggaagcagattgttcggtcggtttctttagtaaaaaaaacaaaaccaaatcgaagtagtttggtttttccctgatgagatcggttggtgtttcttaaaagccaaaaatccaccaagcggtaaaaatcgaaccgaagaacctggacgcccacccctactttctgtaattgttgaattctctctcacaaagacacccacatgtctcatagtcattgttccttttgaatgttctacttgcctacttcacttatccatctccgctccttttcatttgttggtctttgctatgcaacattgttggaatagtgatgttattctgacttctcttttttgtttgtgaaggcctttcttccaaaggagaaaagaactcatctgaggtacttcatatacacttcatgaagtaaactgcaactttgcctagtgactaagctttaacgttctgcaggactgctctgctacttacattaacaaaaaactcaaatcaaagttcagcaaagcctggatatcctttctcaagctgccacttccgcttgatgtgtacaaggaggttaatctctaatttatcttaaagcaattagaaatgatgtgatgctgctatctctctctttttttttcttggcttgaaaccagaccttcgccctttcaacattctacaataagtagcaattggtctcaattgcttcatctttaactttttatgaatggtataagtgttgcatgagcactcttgcaacagcaatttttccgaggatgtaatttacttatttacatgtagccttatggacttagtttacttggagtactgtaataattcaatggccaattagggtgatgtaactatttgttcaacaaattttgttgtttgctgttgccacactaagaattttggtcttgttttgtgatactgccttcttttagtgcacattaactgcgagtactgagcagtgatgatctataaattgcaggtccttgcaacaattcataagaatgtaattccttcaatgtcgaacccggccatcttgtggtaggttattccatttgatctgcatatttgtttgacaccattaatagaattctcataacctctgtattttggtgttgaagtgatttcttgactagatcatatgacattggtggtgttatcagtgtgatggccctaagtggtcttttcattcttatgacacaacatggcctggaatatccaaaattctatgacaaactctatgcattactgactcctgctgttttcatggcgaaacatcgggcagttttcttgcaagtaagtatctcagtaaatatgatgtggcattatcatctgttaatcaagtcatgtcaagtgtaaactgattgcagcttggactgttactccaccaacactttctatcgtcttaataaaatgactgccacacccagcatcacgtttttgaaggcgttctgtaggatttctataaatctaatttttgtagatatccattttccagcaatctgtaatatacttggttaggtcttaggcagtaatcactcgtcaggcggtacagtagcagaatacccaatcttgatgtgatagctaaaaagagaattaatcatgcaaaaggtttataccagttatggcatattagacttgttgactaacctgatgcctgcagcctcccacatccaaatacacctgtggtctttttaatatccatcggattggataatgggaaccaaggaggggtatgtttgccacctgctttggcattgtttgtcactcgctttattctcttaagccacaacttgcagccattgagtgacattctataaattgtggttgtggaaaaagagatggcacttgacacccttaattcatgtagactcatgggtgcaactaagcgaatcaaggcactaaattgtcacccatatgtttgagctatgaaccaccaatcttcaatccatgaatcaactcgataatacaagttaatatgagattttttttgtgcatatttctttttttaaggattattttattattcttaccatctattatggatttcctttttacattttttgactttttttttaaaattgcagcttctggatgcatgtctgaaatcttcatatcttcctgcatatcttgctgccgcgtttgcaaaaagattgagtagactaaccctttcagttccacctgctggcgctcttattattattgctttaattcacaatctactgcggagacacccgtcaataaattttttggtccattgggtatgttacttgttgtaccctttggtgcatatatataatatatagtagctgctgattgatatccttccctgggcagccactttgtgccaacaaagtgaatggcatcatgttcatgtagtccacattctatgttcttttttgtgttgttccgtaagctgtttgtattgctcttctgaataattttcaggaaattgatgcaaatgattctgaaatctttaacgaagctagtcaacgtaagaaggttggcgctgatcctttcaacaatgaagagactgaccctgcaaagtctggtgcaatgcgtaagtgatacctgtatcaaacatatttttcttcatttcatttctttgcaatcctgaattcctaagttgtcagtggttttctgcataccatgtactaatacttgaaaatgcacaacaggaagttctctatgggaaatagacacactgcgccatcattactctcctgctgtttcaaggtaccgggaagcttgatgccctgtttctatgacatctacatttcttgtttgattgtttagctcatttattgtgatactgttaactattgtcagattcgttgcttcacttgaaaatgatctcactgttcgggccaaaactactgagatgaaaataacggactttagttcaggctcctacgcaacagttttcagagatgaggtttgtctgtccgataccttacactatactcaccctcgtatgtatgcctgtatgcatgcacatgtattttacaccaatgcgcaaaatattagggatatgttacatccagcgtacctttcactagatttcaccatgtgttctatgcatatacatatgaaccatgtttacatggttttttctattgaaatgaatccgacaaacctgcttgtttttggagttattgttaaaccaaagtttagtcttgtcacttgtcttatccgctgccatttgagtgtctattattaaataatcactgggaatttactaaaaatctaccaaccctggttttgaattgtaggtacgacggcggataaaacaagttccccttgctttctacagaactacaccaacttgtttatttcaagagtcagattttcctggatggacttttagggatcaattcaaaaacatggcagaaactagtgtagaaggcaatgggatcagtacggtagatattagccacagctcgtccgccaaaaggttgcggatggtgacctgagtagggacccagacagggtgtaccatcttgatccaagttttggaccgtttaagagggggaccaatggacctgttgtatggcctaccattttagtttcattttgtttttttaacatattggaaacaattatgagattaagttgtttttaacagtccaccagtgttgcaagttttgaactgaaaggagtgaagtatgaattacgcgggtaatcttttgctctgattactactaccagtgaaagatgtagccttgaaagttatcaactctagagtaaatgccatttagctc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0585300, RefSeq:Os04g0585300