Os04g0592700

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Revision as of 11:25, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0592700| Description = Quinonprotein alcohol dehydrogenase-like domain containing protein| Version = NM_001060253.1 GI:115460235 GeneID:4336...")
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Gene Name

Os04g0592700

Description

Quinonprotein alcohol dehydrogenase-like domain containing protein

Version

NM_001060253.1 GI:115460235 GeneID:4336833

Length

6554 bp

Definition

Oryza sativa Japonica Group Os04g0592700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:30380119..30386672

Sequence Coding Region

30380524..30380868,30380956..30381130,30381204..30381334,30381634..30381753,30382225..30382301
,30382387..30382633,30382730..30382886,30383508..30383626,30383738..30383872
,30383953..30384238,30384326..30384528,30385049..30385198,30385401..30385583
,30386248..30386595

Expression

GEO Profiles:Os04g0592700

Genome Context

<gbrowseImage1> name=NC_008397:30380119..30386672 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:30380119..30386672 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcttcgtcgcagggcctcaagaagaactaccgctgcgaccgctcgctgcagcagttctacacgggcgggccgttcgccgtcgggagctctcccggaggcggcgaaggcgaagtcgaaggaggcgaggccgaggccgaggcgttcctcgcgtgcgcctgcggcggggaggtgcgcctggtgtccgccgccgacgcgtccgccatcggggagccgatcgagggcgaaaacgaggccgtcacggcgctcgcgctgtcccccgactcccgcctcctcttcaccgcggggcacagtaggcttattcgagtctgggacctcgcgtcccgcacttgcacacgcagctggaaggggcacgatggtcctattagggccatggcctgccatgcttctggtgggttgcttgcaactgctggagcagacaaaaaggtgtgcgtttgggatgttgatggtgggttttgcacacatttctttagaggccacgcaggtgttgtgacgactgttatgttccacaaagatccgaagcgccttctgctattttctggaagtgaagatgccactgtgagagtttggaaccttgaaagcaaaaagtgtgtcgctgtgctgaaagagcatttttcagctgtgacatcattagccttatctgaagatggacaaacattgcttagtgctgggcgggataagattgtgaatgtgtgggatgttcgtaagtacaactcaaagaagacaataccagcatttgaaatgatagaagatgtttccttcattggaccaggaagtaatttattgtcttgtttgggtgaaccggcaaatataaaacgcaaaacagatggttattttcttacggttggtgaacgtggagtagttcgcatctggtgcttggaaagtgctcagtgtatatatgagcagcaatcatccgatgtaaccgttaacacagagaatgaggagtctagaaggggttttacttctgctgttatgttgtcagatgatcaaggactgctatgtgccactgccgatcagcagtttttgttctactgtcccacgagaactgacggaggggacttccagctgaacttatataaacgcctagtaggttataatgatgagattcttgatttgaagtttgttggggaggatgaacaatatcttgctgtagctactaacttggagcaggtccgtgtttatgacgttgcatcgatgtcatgttcttatgtgctgtctggccacactgaaattgttgtttgcatcgacacttgtatttcttcttctgggaagacacttgttgtgactgggagcaaagatagcactgtgagactctgggatatggaaaggagaagctgcattggtattggtaaaggtcatctgggagctattggttccgttgcattctcaaagaaatctaagaatttttttgttagtggaagcagtgatcggaccatcaagatatggagctgggatgatacacttgatgatgttggcagtgaagttcctctcaaagcaaaagctgttgtagctgcacatgacaaagatattaattctctttctgtctcgcctaatgacggtcttgtttgcagtggttctgaggaccgtactgcatgcatatggaaacttccaaacttagtgccctctgttgtccttaaagggcataaaaggggcatttggtcagtcgagttttctcctgtggagcagtgtgtcattacatcatctggtgacagaacagtcaaaatatgggctgttgctgatggttcatgcttgaagacatttgagggccatacatctagtgttttacgagcctcattcctttcacacgggacccaatttgtttcttgtggaagcgatggccttgttaagctatggaccatcaaaacaaatgaatgcattgctactttcgataagcatgatgggaaggtttgggcactggctgttggcaagaaaactgaaatgcttgctactggcggaactgatgctgttcttaacctttggcatgactgtaccatggaagataaacaggaagattttcgtaaaaaggaggaggaactgttgagaggtcaggaattagaaaatgcagtatcagattatgactatgcaaaagcaatacaacttgcatttgagcttagaagaccccacaggcttcttgagttattcacacagctttgcagggagtctgatctggaggacccaatagaaaaagcccttattggtcttccaaaggaagggcttcgcgtacttcttgagtatatccgggaatggaacacaaaacctaagctttgtcatgttgcacagtttgtgctttttcgggtattgaggagcttgcctcccactgatatcctggagataaagggcatcagtgagctccttgagggacttattccatattcacagaggcatttcagcagagttgatagactagtacgaagcacatttttattggattacaccttgacccggatgtctgttgtagatccggacatagatgagggcacaaccagagatgacgcaaatggctcatcagtagagaattgtgaaattgcacaggcgaagcctgatgcattggtagcagaagagaacttgcaaaagtcggtaaagaaaagaaaatcaagcaaatcaagcaaaaaaggcggtaagaaggtgaagattgcgtccacggggggcagtaaggatgttcctattgaggcttaa</cdnaseq>

Protein Sequence

<aaseq>MASSQGLKKNYRCDRSLQQFYTGGPFAVGSSPGGGEGEVEGGEA EAEAFLACACGGEVRLVSAADASAIGEPIEGENEAVTALALSPDSRLLFTAGHSRLIR VWDLASRTCTRSWKGHDGPIRAMACHASGGLLATAGADKKVCVWDVDGGFCTHFFRGH AGVVTTVMFHKDPKRLLLFSGSEDATVRVWNLESKKCVAVLKEHFSAVTSLALSEDGQ TLLSAGRDKIVNVWDVRKYNSKKTIPAFEMIEDVSFIGPGSNLLSCLGEPANIKRKTD GYFLTVGERGVVRIWCLESAQCIYEQQSSDVTVNTENEESRRGFTSAVMLSDDQGLLC ATADQQFLFYCPTRTDGGDFQLNLYKRLVGYNDEILDLKFVGEDEQYLAVATNLEQVR VYDVASMSCSYVLSGHTEIVVCIDTCISSSGKTLVVTGSKDSTVRLWDMERRSCIGIG KGHLGAIGSVAFSKKSKNFFVSGSSDRTIKIWSWDDTLDDVGSEVPLKAKAVVAAHDK DINSLSVSPNDGLVCSGSEDRTACIWKLPNLVPSVVLKGHKRGIWSVEFSPVEQCVIT SSGDRTVKIWAVADGSCLKTFEGHTSSVLRASFLSHGTQFVSCGSDGLVKLWTIKTNE CIATFDKHDGKVWALAVGKKTEMLATGGTDAVLNLWHDCTMEDKQEDFRKKEEELLRG QELENAVSDYDYAKAIQLAFELRRPHRLLELFTQLCRESDLEDPIEKALIGLPKEGLR VLLEYIREWNTKPKLCHVAQFVLFRVLRSLPPTDILEIKGISELLEGLIPYSQRHFSR VDRLVRSTFLLDYTLTRMSVVDPDIDEGTTRDDANGSSVENCEIAQAKPDALVAEENL QKSVKKRKSSKSSKKGGKKVKIASTGGSKDVPIEA</aaseq>

Gene Sequence

<dnaseqindica>5805..6149#5543..5717#5339..5469#4920..5039#4372..4448#4040..4286#3787..3943#3047..3165#2801..2935#2435..2720#2145..2347#1475..1624#1090..1272#78..425#cctctgtctcgcgccgccgccgccgccgcagcaaaaccctagcctccgccgccgtcgttccctcccgccgcctcgcgatggcttcgtcgcagggcctcaagaagaactaccgctgcgaccgctcgctgcagcagttctacacgggcgggccgttcgccgtcgggagctctcccggaggcggcgaaggcgaagtcgaaggaggcgaggccgaggccgaggcgttcctcgcgtgcgcctgcggcggggaggtgcgcctggtgtccgccgccgacgcgtccgccatcggggagccgatcgagggcgaaaacgaggccgtcacggcgctcgcgctgtcccccgactcccgcctcctcttcaccgcggggcacagtaggcttattcgagtctgggacctcgcgtcccgcacttgcacacgcagctggaaggtaacatctcttctgtgagaactcgatgtgttgtgcacttatgcggtgatttcatgtactgtctccaatttgaatgatgtgcaagggatatggtgaattcgccttacttttagcaatttcattggagtcatatttgcgtccctgaaagtatattgttggcttaacactctgtgctgtgaactgttcatattgtgcgtttttatgatacaatacaaataagcacactagataaacctcacaaacctctatttttggattatattgtgcattgctttgtttttatgaatgtggaacttatgtagtggtgggactgtaatacctttccccccaccctctcctcttaccgagtcgatccgaatgatgtgcctcaatccattagtgagtgtaatgttacacatattaatgactaaaacgacatgttatagtggtcagccaaatttactgtctccatgtagattcaattaaatgagaaaaaaatctgttcatcaactgctttttgcaatcataagttcatcagaagtggggcttccctgataacttttaacttcttttgccactcaaagtagttcacttcagtaaattattaatttattatggcacattggcaagcttttcccggtataacatgtgtgataagcttatgtatttcttttatgacttacaggggcacgatggtcctattagggccatggcctgccatgcttctggtgggttgcttgcaactgctggagcagacaaaaaggtgtgcgtttgggatgttgatggtgggttttgcacacatttctttagaggccacgcaggtgttgtgacgactgttatgttccacaaagatccgaagcgccttctggtaagtagaagtacgatatgtgaatgtcatcaatgaaaatgctctttgagcttgttaggctaagccgcttgatttccataatcagatgtacttggttttaatgatatatttactccagtgttgtttattcagtattcacatcttcattgtattcttctactcttggtactataaaaattacccttgtttctttgttctctagctattttctggaagtgaagatgccactgtgagagtttggaaccttgaaagcaaaaagtgtgtcgctgtgctgaaagagcatttttcagctgtgacatcattagccttatctgaagatggacaaacattgcttagtgctgggcgggataaggtaagattgagatactgaatctcttctaattaataaaaaaagcgttatgtggcaatgcctgtcatgttccagcaatactatagatgttgcctgtgatgcctctgtttcagtgttgcatgttcatatttttatttgctaccggagttctaaaatcagttggcgttgattggaacaatcataaattacaaggtttttttttgtgctctttgagtgcatccatgtacataaaactacccaaccgaatgcaagttactctcttaataaattcctaggctctataacaccatggtaggttttagctgttcgtattgccaagttttaataaagaacaaataggctagtatatcattgtcctgtttatttttctagatgagtcctgttggctagactttcagcattcttgattatatactctactatgtcctctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttctctctctctctctggagctgcatgcaattttgagtatacatggaacatctgcagattgtgaatgtgtgggatgttcgtaagtacaactcaaagaagacaataccagcatttgaaatgatagaagatgtttccttcattggaccaggaagtaatttattgtcttgtttgggtgaaccggcaaatataaaacgcaaaacagatggttattttcttacggttggtgaacgtggagtagttcgcatctggtgcttggaaaggtacgtcagtcgttgcattttcagttcagtgctattttgcttagctctggactgcatgaaattgattgcttcttggtcattccacagtgctcagtgtatatatgagcagcaatcatccgatgtaaccgttaacacagagaatgaggagtctagaaggggttttacttctgctgttatgttgtcagatgatcaaggactgctatgtgccactgccgatcagcagtttttgttctactgtcccacgagaactgacggaggggacttccagctgaacttatataaacgcctagtaggttataatgatgagattcttgatttgaagtttgttggggaggatgaacaatatcttgctgtagctactaacttggagcaggtgagttgcccctaaatcttagtacagttcttgtggacatatgtattttagctttctcacactatttcctccgtatgtaggtccgtgtttatgacgttgcatcgatgtcatgttcttatgtgctgtctggccacactgaaattgttgtttgcatcgacacttgtatttcttcttctgggaagacacttgttgtgactgggagcaaagatagcactgtaagttgtagtggcctattctgactgaaactgacatattttccttttctttttttttgttttgtttttgcagtcttttctcgtgttgcatttgacttttgcatttcgcaggtgagactctgggatatggaaaggagaagctgcattggtattggtaaaggtcatctgggagctattggttccgttgcattctcaaagaaatctaagaatttttttgttagtggaagcaggttagttttcaagttatttctgttccactttagataatcagttcctctgatttttgtatgctatgtaattctgtttatctattgaccaatcgttatattcatttcctccgattattcatgtttctctgatgcatcatgtttattagctactgacaactcttgtgagactaggcttagttcttttcttcaactccaaacttcaacttcctcattttccgttagcacgcttttcaaactgttaaatggtgattattttgcaaaagaaaattctatatggaagttgtttttaaaaaatcaaataaatctatttttcaagtttataatagttaatacttaattcattatgtgctaatgagctttctcgtttcgtgtgcgttgcaaatcttcctctagagtcgtgcaaagaacgcattaattcagatgccatgttttggtttgattctccctgtgcatgagcatgagtggcgagtgttatgaggatatccaactttgccttagtagcagaactattcatggactcctgagtattagttttgagaataatagtaccatttctcatgtaattctttccagtgttttactgttgacattgttctaaaattgaggttttcttgttattagtgatcggaccatcaagatatggagctgggatgatacacttgatgatgttggcagtgaagttcctctcaaagcaaaagctgttgtagctgcacatgacaaagatattaattctctttctgtctcgcctaatgacggtcttgtttgcagtggttctgaggttagattgcagtatgttatacttaatggtcatcggctttttatttggcttaaatcatcgaacttgtcattagatctcattaccttgcttctgcaggaccgtactgcatgcatatggaaacttccaaacttagtgccctctgttgtccttaaagggcataaaaggggcatttggtcagtcgagttttctcctgtggagcagtgtgtcattacatcatctggtgacagaacagtcaaaatatgggctgttgctgatggttcatgcttgaagacatttgagggccatacatctagtgttttacgagcctcattcctttcacacgggacccaatttgtttcttgtggtaagaagaaacaggacaaattcttaaggtacttttcaagggagaaactttattgacactattcttgcgatgttccttgtcgtaggaagcgatggccttgttaagctatggaccatcaaaacaaatgaatgcattgctactttcgataagcatgatgggaaggtatgatagtctcatctgctctgtttttcattgaaaaccctagcagtatatcaacctattattatcacaattccagtatgtcaatagtgcaatctcttcattgagttgagaattataacactatctattgaagtttttaccaatatttatagaattaggaacgaacctatttgtgctcagtcaagcagaaaactgttgccattgttgttcatggcttatggctttctgacaatctaacattcactttggctatgccatgaacttgccttttctgataaattgggacctcttttgctctaaaattcctctttgggaagaacgtgtagtttatgaaattattcagtatgtatttcagtacctgacaaaaactttgcaatatcgagatcattaatatttaataggcaatgtggaagagatcttttctggtacatgtttaagatggacttggcaattgattcagtcattcaacaggtttgggcactggctgttggcaagaaaactgaaatgcttgctactggcggaactgatgctgttcttaacctttggcatgactgtaccatggaagataaacaggaagattttcgtaaaaaggtaagtgatgtgttctattatactttcagtgcagtgcttcttgagttcttgtaaagacataagagatgtacttgtgtctgttactgtgttgaacacatggtctgatgactgatgtcaatctagtaattaatatcttttttttttctgcccaccaatctttgtgggtttagacttttcccttgtatttccagatcagctacacttgtttcttttacaaaggtggctcttggaatctatatagaaatatttttatttaatttccacacttgcaatactcattacattcaccattgttgcaggaggaggaactgttgagaggtcaggaattagaaaatgcagtatcagattatgactatgcaaaagcaatacaacttgcatttgagcttagaagaccccacaggcttcttgagttattcacacagctttgcaggtactcataatcctttattgaagctcactagtttttctttgataacaaattgatatatcacatgagtgtgcagggagtctgatctggaggacccaatagaaaaagcccttattggtcttccaaaggaagggcttcgcgtacttcttgagtatatccgggaatggaacacaaaacctaagctttgtcatgttgcacagtttgtgctttttcgggtattgaggagcttgcctcccactgatatcctggaggtacttcctttccccctttctgagttatgtccaagagcctcatataacaaacttttactctttttatgacaccatttgtttctgcagataaagggcatcagtgagctccttgagggacttattccatattcacagaggcatttcagcagagttgatagactagtacgaagcacatttttattggattacaccttgacccggatgtctgttgtagatccggacatagatgagggcacaaccagagatgacgcaaatggctcatcagtagagaattgtgaaattgcacaggcgaagcctgatgcattggtagcagaagagaacttgcaaaagtcggtaaagaaaagaaaatcaagcaaatcaagcaaaaaaggcggtaagaaggtgaagattgcgtccacggggggcagtaaggatgttcctattgaggcttaaatagttgacaaaccgcagttatatgttattcgcaccaccaattttgtagctgctgttttatctggtatgttgcagcatgaatcacatgttttaccttttgacccactgtacagaatgcattctttgcttgagttagaaagatctggtggctttcagttctaaatttctaagtgcttcagaaagttttaccgtccttgatagttgttgccatcttctgcgttgggtacttgggttagtttgccttgattaatttccatgtgtgtgtatggcagtggcacggaagcggtacccagcagcaaataaagttgcttgctccacttgtaattgttggatctgcgatctggatgtcggctctcttcataattcccgtccttgtcatctggcagaaattttttatggttcggt</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0592700, RefSeq:Os04g0592700