Os04g0594100

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Revision as of 11:25, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0594100| Description = Similar to P-type R2R3 Myb protein (Fragment)| Version = NM_001060261.1 GI:115460251 GeneID:4336841| Length = 1846 b...")
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Gene Name

Os04g0594100

Description

Similar to P-type R2R3 Myb protein (Fragment)

Version

NM_001060261.1 GI:115460251 GeneID:4336841

Length

1846 bp

Definition

Oryza sativa Japonica Group Os04g0594100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:30427357..30429202

Sequence Coding Region

30427750..30428596,30428701..30428830,30428937..30429075

Expression

GEO Profiles:Os04g0594100

Genome Context

<gbrowseImage1> name=NC_008397:30427357..30429202 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:30427357..30429202 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggaagggccgggcaccgtgctgcgccaaggtggggctgaacaaggggtcgtggacgccggaggaggacatgaggctcgtcgcctacattcagaagtacggccacgccaactggcgcgccctgcccaagcaagcaggtttgctccggtgcgggaagagctgccgactccggtggatcaactacctccggccggacctcaagcgcggcaacttcaccgccgaggaggaggagaccatcatcaagcttcacggccttctcggcaacaagtggtcgaagatcgcgtcgtgcctgccggggaggacggacaacgagatcaagaacgtctggaacacgcacctcaagaagcgggtgtcgccggagcagaagaagggtgggggcaagagcaagaagaagacgacctgcaccgacgtgctcgtcccgtccccatcgccgtcgtcgtccaccaccaccacgaccaactgctccagcggcgactcagccggcgagcagagcaacacgagcaaggaggaggaggaggagacggacaagatcgagatccccatgctcgagctcgacccctgctgcttcgacttcgacatgctggttgaccccgttgtcccggacacgtactgccccgcggtgtcggcgtcggcgtcggcgtcggcgccgacgtcgccgtgctcgtccacgtccccgtcgtgcgcccgtgcaggcgtggacccgctgctcgacctgcccgaaatcgtggacctcgggccggagctatggagcatcatggacggcggcgccggcgacgggtgcaccgaagcgccgccgccggcgtggagcaatgcggcggcggcggcggcggccaatgcaacagtggccaccacgaccagcctggaggaggaggaggggaaggagtggtggttggaggacttggagaaggagctcgggctgtgggggcccacggacgactaccactgccacccgggcccacaaggtcagcccggtcgcgcgggcccaccaccctccgccgttgtggaggacccagtgtcgtgctacttccaagcgggccccacggcagccgccacgtggcagggacacgagccctcggctgtcatcacgagtaaccccatggattactacgtgtaa</cdnaseq>

Protein Sequence

<aaseq>MGKGRAPCCAKVGLNKGSWTPEEDMRLVAYIQKYGHANWRALPK QAGLLRCGKSCRLRWINYLRPDLKRGNFTAEEEETIIKLHGLLGNKWSKIASCLPGRT DNEIKNVWNTHLKKRVSPEQKKGGGKSKKKTTCTDVLVPSPSPSSSTTTTTNCSSGDS AGEQSNTSKEEEEETDKIEIPMLELDPCCFDFDMLVDPVVPDTYCPAVSASASASAPT SPCSSTSPSCARAGVDPLLDLPEIVDLGPELWSIMDGGAGDGCTEAPPPAWSNAAAAA AANATVATTTSLEEEEGKEWWLEDLEKELGLWGPTDDYHCHPGPQGQPGRAGPPPSAV VEDPVSCYFQAGPTAAATWQGHEPSAVITSNPMDYYV</aaseq>

Gene Sequence

<dnaseqindica>607..1453#373..502#128..266#gcagcttggccgcacgcctgaacacacacaacagcagcagcagcaacagagcacggaggcagaggcaacaccgagacacgagttgttctgggcggcggcggcggcggccggggacggacgacgtacgatggggaagggccgggcaccgtgctgcgccaaggtggggctgaacaaggggtcgtggacgccggaggaggacatgaggctcgtcgcctacattcagaagtacggccacgccaactggcgcgccctgcccaagcaagcaggtaacgcatcgccgccgcagagagagcagcttgttgttgtcgttgcagaggtggaagaaagagcaggttctgatgaatcgtgggtgtttttttttgtcgtgtgcaggtttgctccggtgcgggaagagctgccgactccggtggatcaactacctccggccggacctcaagcgcggcaacttcaccgccgaggaggaggagaccatcatcaagcttcacggccttctcggcaacaagtacgtacgccgctgtagccatgggaatttcgagtgcgattcttgatttgaataagttggattcagtgcgctgattgtctgagtttgtgatcgaattttctcaggtggtcgaagatcgcgtcgtgcctgccggggaggacggacaacgagatcaagaacgtctggaacacgcacctcaagaagcgggtgtcgccggagcagaagaagggtgggggcaagagcaagaagaagacgacctgcaccgacgtgctcgtcccgtccccatcgccgtcgtcgtccaccaccaccacgaccaactgctccagcggcgactcagccggcgagcagagcaacacgagcaaggaggaggaggaggagacggacaagatcgagatccccatgctcgagctcgacccctgctgcttcgacttcgacatgctggttgaccccgttgtcccggacacgtactgccccgcggtgtcggcgtcggcgtcggcgtcggcgccgacgtcgccgtgctcgtccacgtccccgtcgtgcgcccgtgcaggcgtggacccgctgctcgacctgcccgaaatcgtggacctcgggccggagctatggagcatcatggacggcggcgccggcgacgggtgcaccgaagcgccgccgccggcgtggagcaatgcggcggcggcggcggcggccaatgcaacagtggccaccacgaccagcctggaggaggaggaggggaaggagtggtggttggaggacttggagaaggagctcgggctgtgggggcccacggacgactaccactgccacccgggcccacaaggtcagcccggtcgcgcgggcccaccaccctccgccgttgtggaggacccagtgtcgtgctacttccaagcgggccccacggcagccgccacgtggcagggacacgagccctcggctgtcatcacgagtaaccccatggattactacgtgtaagctcgtcgttaattacccatttttatctctagattaggagatatacgattacccaactcgaccgaatcgtccagtgatgctacatacttctagtacaatacacgcgtataattgtacgaccgtataaaggagtactataccaatccaatacgaagacggcatcgatgggaacaacacatgcaaagatgcatatatgcttttgggcagtaaaaaaggtgatagttaggctaggatgcacaaaaaaggtgttaattttttttttgggatgtctatatatgttgggcagattaagtggtgcatgcaatcacaaatgagtcaagattgccggtacgagttaaccagagatgtaacttatgtacttttaacatcagtttccagcagatgttggtattg</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0594100, RefSeq:Os04g0594100