Os04g0597300

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Revision as of 11:25, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0597300| Description = Similar to WERKY protein (Fragment)| Version = NM_001060270.1 GI:115460269 GeneID:4336850| Length = 3404 bp| Defini...")
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Gene Name

Os04g0597300

Description

Similar to WERKY protein (Fragment)

Version

NM_001060270.1 GI:115460269 GeneID:4336850

Length

3404 bp

Definition

Oryza sativa Japonica Group Os04g0597300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:30531661..30535064

Sequence Coding Region

30531680..30532035,30532285..30532335,30532999..30533139,30534098..30534794

Expression

GEO Profiles:Os04g0597300

Genome Context

<gbrowseImage1> name=NC_008397:30531661..30535064 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:30531661..30535064 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtgcgactacttcctgcagaggatggagggcgaccaggccggcggcgacctcaccgacatcgtccgcgccgggggaggggccatgccggggagcgtcgtcgtcgacctcccgtcgacggccgccgagtggcagctcccggctgagccgatgctcttcccgccgccgccgtcgttgtcgtcgacgacggacggctgtggcgccgggggagcggcaggcgccgacatcttcggcggtggcggcggcgaccttttctccggcctcgtggacccgttcagcagcgactactcgtccggcgcggacttcttggacgccatgccggacgcgatggcgaaggtcggcttcgacacagctgtcgtcgccggcatgcagatgtcgtcgccgcgctccggcgggatcaagcgcaggaagaaccaggcgaggaaggtggtgtgcatcccggcgccgacggcggcgggaggaagacccagtggtgaggtggtgccttctgatctctgggcttggaggaagtacggccagaagcctatcaagggctcaccctacccaagaggctattatagatgcagcagttcaaaaggttgctctgcaaggaagcaagtagagcgcagccgtactgacccaaacatgctcgtcatcacctacacctcggagcacaaccacccatggccgacccagcgcaacgccctcgccggctcaacccggtctcaccacagcaagaacagcggcggcggcggcggctcgggttccaagggctctcagaacgacaagtcacagcagcagccaagcgttaaagaagagcagaaggatcaggcgacgacggcgacgacgacgaccaccagcacaatcactaccacgaatagtgcttctcctgtggttgtgaaggaggaagaggcggcactggcaggatcgtcggaagcattggagttggagagagtcatggacactactgcagctggagtagtagaccacagtgagctcatggatcatgttttcagtgagagctacaagccgatgataccggagactggccagccggatgatttcttcgcagacctcgccgagttggagtcagatcccatgagcttaatcttctcgaaggagtacatggaagccaagccaagtggtggcgatcatgcccaggagaaggcaatggccaaggaattggatccattcgacatgctagactggtctactactactaactcttcggcagggagctcatttgagcaagggaagagaggctaa</cdnaseq>

Protein Sequence

<aaseq>MCDYFLQRMEGDQAGGDLTDIVRAGGGAMPGSVVVDLPSTAAEW QLPAEPMLFPPPPSLSSTTDGCGAGGAAGADIFGGGGGDLFSGLVDPFSSDYSSGADF LDAMPDAMAKVGFDTAVVAGMQMSSPRSGGIKRRKNQARKVVCIPAPTAAGGRPSGEV VPSDLWAWRKYGQKPIKGSPYPRGYYRCSSSKGCSARKQVERSRTDPNMLVITYTSEH NHPWPTQRNALAGSTRSHHSKNSGGGGGSGSKGSQNDKSQQQPSVKEEQKDQATTATT TTTSTITTTNSASPVVVKEEEAALAGSSEALELERVMDTTAAGVVDHSELMDHVFSES YKPMIPETGQPDDFFADLAELESDPMSLIFSKEYMEAKPSGGDHAQEKAMAKELDPFD MLDWSTTTNSSAGSSFEQGKRG</aaseq>

Gene Sequence

<dnaseqindica>20..375#625..675#1339..1479#2438..3134#ctagctagctaagctagccatgtgcgactacttcctgcagaggatggagggcgaccaggccggcggcgacctcaccgacatcgtccgcgccgggggaggggccatgccggggagcgtcgtcgtcgacctcccgtcgacggccgccgagtggcagctcccggctgagccgatgctcttcccgccgccgccgtcgttgtcgtcgacgacggacggctgtggcgccgggggagcggcaggcgccgacatcttcggcggtggcggcggcgaccttttctccggcctcgtggacccgttcagcagcgactactcgtccggcgcggacttcttggacgccatgccggacgcgatggcgaaggtcggcttcgacacagctgtcggcggcggctgcggcggcggcggcggaggtggtggtgggagcggtggacacctgttagacatgagcaggaagcctctcttgcccagagggatgccgatggcggccgtcggtgggctggcggcgccgagggtgatgccatcgccgctgtcgccgcgagccatacggccgtacccgccgatctccgcaggcgacatgatgaagctcggcatcacggcagggcaggcggccgggtgcgccatcgacgccgccgtcgccggcatgcagatgtcgtcgccgcgctccggcgggatcaagcgcaggttgggccggcaaccaccatcctatagctagatctaattagatcgatccaaaaagaattcttcgtttggttgcatgcacaatatcttgggttaatttcgtaattcgtgaccggattttgattaattaggggggaagtgattgtacaacttctccttgtttttttttctctctttcgctatccaatttgctgttcttttttcgaaacaagcaaatttgctgttctttttttccgtgttctgcactgcaccgccgaagaaagtaagaagagagatcgaggaggaattccgaggattcttcgggctgtggcaaggtcacagatgttacctacagctcaaaattttaggcacaagagttatcatgaacacatggtgaacggtgggaatatttctggattggcaaaaacgcattgcatatcgggtgatgtgcatatctgcatctagacctaaccggccacagctttttttccggccggcaaggtcggcttttgaaaccctaagctagcacatacgcatcgcctcgatttgatcgatgcaaaatttgcaaacgagttaattaacttggctgcgacattgcgtgtgtacacatatggatatgtaaaacaaaaaaagaaaaaactgtgagatatataagtgatacttatccaagtgctaattaaattgcaggaagaaccaggcgaggaaggtggtgtgcatcccggcgccgacggcggcgggaggaagacccagtggtgaggtggtgccttctgatctctgggcttggaggaagtacggccagaagcctatcaagggctcaccctacccaaggtacatgcatgtttatcattctagcaaatgcattttctgttttaacataagctaattgatttgatgaggtaataaattggattgaattgagtgtgtatgcattaaaatgtttgaacaaactctttttaatcatctggcattcatgtatatatatagtccatcatcattatataattttatccagtactccacattgcgtctgcacgatccatgcatggaagtcaagagattaattggaagatactaaacaaatggttagctaggtatagggtagcatgaaagatgcatgcatgcttctagctaattctcatatccaactagttctactagcttctgtaatttttgtggtatttttggggttgcacacctcatcacatacagatagtactccataaatgtgtgacgaattaattagctagataaaatgtactgaaataatatctgctgagattagtttatccttattccaagggtgtagtacttagtttatccatgtattaatttgtacaagttttaaatcagcaagtctcaactctcggtgcacactgcaggtaactagctagctcacacgattagatggagtatactcctatatctttctggcaagctagatgcagttaagtccaggatttttttttttgtacacacatcagatatgatgtttctctttctcttaaaataaaaatggaagtgtaatgaagtgagtaaaattaaatcaagtactgtaaccagtttgagaccactgtgatttcagtatgaaagtcaaaacatttttttattggaaacggccggatatatcttccataacttagaggatcgaagcacataggagtactactactagtacttattaatttacctacagcattggtttaatatcagaacaagtgatgaagtgcatgcaagcttaattagtcgatctaaacaaatatatcttgttgaaatgaacaatttgcagaggctattatagatgcagcagttcaaaaggttgctctgcaaggaagcaagtagagcgcagccgtactgacccaaacatgctcgtcatcacctacacctcggagcacaaccacccatggccgacccagcgcaacgccctcgccggctcaacccggtctcaccacagcaagaacagcggcggcggcggcggctcgggttccaagggctctcagaacgacaagtcacagcagcagccaagcgttaaagaagagcagaaggatcaggcgacgacggcgacgacgacgaccaccagcacaatcactaccacgaatagtgcttctcctgtggttgtgaaggaggaagaggcggcactggcaggatcgtcggaagcattggagttggagagagtcatggacactactgcagctggagtagtagaccacagtgagctcatggatcatgttttcagtgagagctacaagccgatgataccggagactggccagccggatgatttcttcgcagacctcgccgagttggagtcagatcccatgagcttaatcttctcgaaggagtacatggaagccaagccaagtggtggcgatcatgcccaggagaaggcaatggccaaggaattggatccattcgacatgctagactggtctactactactaactcttcggcagggagctcatttgagcaagggaagagaggctaaacccatgggcataaagccatgcatgagggtttatgcatgcatacggttacataaacttgatcccagctaataaccataaagattgtgacaatgtcagcaaaggaaagatgagattttttttttttacttttcttttcttcatttggtctctctgcttcttcatattattgtgtgtgagaattaaattttgtttcaaggtctaggtatatggacctcattttttaggctgtgtcaacttgttgtacttatgcatgagatgatgaccactct</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0597300, RefSeq:Os04g0597300