Os04g0597400

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Revision as of 11:25, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0597400| Description = TGF-beta receptor, type I/II extracellular region family protein| Version = NM_001060271.1 GI:115460271 GeneID:433685...")
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Gene Name

Os04g0597400

Description

TGF-beta receptor, type I/II extracellular region family protein

Version

NM_001060271.1 GI:115460271 GeneID:4336851

Length

2972 bp

Definition

Oryza sativa Japonica Group Os04g0597400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:30543708..30546679

Sequence Coding Region

30543708..30543779,30544091..30544165,30544333..30544441,30544919..30545136,30545223..30545803
,30545881..30546679

Expression

GEO Profiles:Os04g0597400

Genome Context

<gbrowseImage1> name=NC_008397:30543708..30546679 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:30543708..30546679 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacgctgaccacgagcgccggcgtcccgagcagggcgctctgaggaggccgcttttagccgacgacgagacttgtggccaccgcactgcagagtgcagaggagtctttccgtttatcgatttctgctctgctgaagattgcgaggcatcttcctcaaatcagagcctggtatctcaggaagatcggggacaagaggtggctgaggtgcagaaggttgagagctgctccaacaaggcactgataatcatcttgagcctgcaattcttggaaatcactgccttctacggggtctacctgaacctgatagtgtatcttcaggacgttcttcatggcgacagtgcttcgaacgtggcgacggtcagttcttgggtcggaactgcctacctcatgcccatcctcggcgccgccgtcgccgactcttgctggggaaagtacacgacggtgttggccggcttctccatagctctcgtcggcatggtcaccatcaccgcgtcggccacgctgccgtctctgagaccgccgtcgtgcgggcagagcgcctactgcgtcccggcgacgctcagccagaagctggtcttcttcacgggcatatacctctgcgccctcgggatcggcggcgcgaaggccgtgctgatcgcgttcgggccggagcagctcgacgacgacgacggcggcggcaagaacgagcgggtgcgggagaggaaggcgtcctacttcagctggtactacgcggtggccaacgtgggcatgctcacggcggggacgatgctggtttggttcgaggacaacgtgagctgggggttcgggtacggcctgtgcgcgtcgttcgtcgcggtcgcggtcgtcgtcctcgccgcgacagcgcccatgtaccggatcctgcccccggcgggcagcccgttgaagagtgtgatccaagtgcttgtggcgttctctcacaaggctaaattgactttgccggacgatccaactgaactgtacgaggacgacggcgtcaagaactcgttgcagcatccggtgcacgaacgattagagcacaccaaccaattcaggtgtttggacaaggctgccattgtcagcgacgaggatctggaagacggcgacaggtggaggctgtgcacggtgtcccaggtggaggaggtcaagattctgctgcggttgatcccgatatggctcacgtcggcggtctacttcatcgcgaacacgcaggctcagaccacgttcgtgcagcagggcaccaagacggacggccggatcgcgcgcggcgcattctccgtcccggccgcgtcgctgtcgtccttccagatggcgttcgtcgccgtcttcgtcacgctctacaacagggccgtgatgcccgcggcgcgccggtgcctcggccgcgccgtggcgttcacgccgctgcagctcatggggttcggccacgcgacggcggtcgtcgcggtgggcgtggccgcgtgcaccgaggcgcgccggctgcacgcggccagggccggggcgcccgccatgggcatcgcgtggctgctgccgcagtacctcgtgatggccgcctccgacgcgtcgctcaccgtcgggcagctggagttcttctacgaccagtcgccggagacgatgcggagcgcgtcgacggcgttctacttcctcgccatatcgctcgggaacctgctcaactctcagctggtgactctggtggcgaaggtgaccgcggtatggggcaatgcagggtggtttccactggacttggatgacggtcacctggattacttcttcctgctcatcgtggccatcaccgcggtgaacttcgcagtttacgtcgccctcgccaagaactacacgccaaagaaggttaggtag</cdnaseq>

Protein Sequence

<aaseq>MDADHERRRPEQGALRRPLLADDETCGHRTAECRGVFPFIDFCS AEDCEASSSNQSLVSQEDRGQEVAEVQKVESCSNKALIIILSLQFLEITAFYGVYLNL IVYLQDVLHGDSASNVATVSSWVGTAYLMPILGAAVADSCWGKYTTVLAGFSIALVGM VTITASATLPSLRPPSCGQSAYCVPATLSQKLVFFTGIYLCALGIGGAKAVLIAFGPE QLDDDDGGGKNERVRERKASYFSWYYAVANVGMLTAGTMLVWFEDNVSWGFGYGLCAS FVAVAVVVLAATAPMYRILPPAGSPLKSVIQVLVAFSHKAKLTLPDDPTELYEDDGVK NSLQHPVHERLEHTNQFRCLDKAAIVSDEDLEDGDRWRLCTVSQVEEVKILLRLIPIW LTSAVYFIANTQAQTTFVQQGTKTDGRIARGAFSVPAASLSSFQMAFVAVFVTLYNRA VMPAARRCLGRAVAFTPLQLMGFGHATAVVAVGVAACTEARRLHAARAGAPAMGIAWL LPQYLVMAASDASLTVGQLEFFYDQSPETMRSASTAFYFLAISLGNLLNSQLVTLVAK VTAVWGNAGWFPLDLDDGHLDYFFLLIVAITAVNFAVYVALAKNYTPKKVR</aaseq>

Gene Sequence

<dnaseqindica>1..72#384..458#626..734#1212..1429#1516..2096#2174..2972#atggacgctgaccacgagcgccggcgtcccgagcagggcgctctgaggaggccgcttttagccgacgacgaggtacgtgtgcttctgcttccccgcgcgcccccgtagcagcagtagtatgtactaccaccgacagcttcgctgccggcgccgcgcgcgagattgctcgttgcttcgaatcgcggagggctcgtgttcgcatcacccgcgctagccggccaccgcggccggtacgtcgcgcgcggctttcgcgtgtgccgcctgaattgggccgtgcacggtgcacccgcggcccgcggcgcccctcgttgtcgaacaacacatgatggatggtccacagaccacagcagaagcagctcctccactgtactatatggttgtagacttgtggccaccgcactgcagagtgcagaggagtctttccgtttatcgatttctgctctgctgaagattgcgaggtacaataggctggttaccttcgcattccaaatggggcttcgatgagaacaccaacttatttacttacgtggcaactgctttattgttctattttttggtcaaaatgagattggtactagtatacggcgactctgctttaaggttttgcttgctgtaatgcttgcaggcatcttcctcaaatcagagcctggtatctcaggaagatcggggacaagaggtggctgaggtgcagaaggttgagagctgctccaacaaggcactgataatcatcttgagtgagtgcctagccatacttgctcgacttgttcaaatcagcaatattgcaatatcgtcagatgaaaatgctgagaaaaaaaaagagttactgtagtactgatttgtctaaaaaaacataggtctgaaataaatatgtgtgcagtagcagtagtcatcagctatagtaggttagacaacgatcggattagactgattctcgagaaaagggaaacgtagattagagtctgattgaaaataatgatatgactatatgagacctggtcttatgcatgattggatcaaataaatgtcagattaccatgcgcggatatcctaggattacctttcaactttttccagagtgatgtttttcagccaacactactgtcttttcatatttttgccttttttttgtctacctctgtttacattcttgaactgccaattcgaactgaattatgtaagattctcaccagtcaacccatcctaactaacaggcctgcaattcttggaaatcactgccttctacggggtctacctgaacctgatagtgtatcttcaggacgttcttcatggcgacagtgcttcgaacgtggcgacggtcagttcttgggtcggaactgcctacctcatgcccatcctcggcgccgccgtcgccgactcttgctggggaaagtacacgacggtgttggccggcttctccatagctctcgtcgtaagcgatcttcccctgtaatgcacacgatctgcagaagcacaatggcgctctctgcttctctgacggacacaatccgaacacagggcatggtcaccatcaccgcgtcggccacgctgccgtctctgagaccgccgtcgtgcgggcagagcgcctactgcgtcccggcgacgctcagccagaagctggtcttcttcacgggcatatacctctgcgccctcgggatcggcggcgcgaaggccgtgctgatcgcgttcgggccggagcagctcgacgacgacgacggcggcggcaagaacgagcgggtgcgggagaggaaggcgtcctacttcagctggtactacgcggtggccaacgtgggcatgctcacggcggggacgatgctggtttggttcgaggacaacgtgagctgggggttcgggtacggcctgtgcgcgtcgttcgtcgcggtcgcggtcgtcgtcctcgccgcgacagcgcccatgtaccggatcctgcccccggcgggcagcccgttgaagagtgtgatccaagtgcttgtggcgttctctcacaaggctaaattgactttgccggacgatccaactgaactgtacgaggacgacggcgtcaagaactcgttgcagcatccggtgcacgaacgattagagcacaccaaccaattcaggtagtaatctaatatattctcatggagctaggtgaacaaccatggtctcagagactcgtccctttgcgatgcactaggtgtttggacaaggctgccattgtcagcgacgaggatctggaagacggcgacaggtggaggctgtgcacggtgtcccaggtggaggaggtcaagattctgctgcggttgatcccgatatggctcacgtcggcggtctacttcatcgcgaacacgcaggctcagaccacgttcgtgcagcagggcaccaagacggacggccggatcgcgcgcggcgcattctccgtcccggccgcgtcgctgtcgtccttccagatggcgttcgtcgccgtcttcgtcacgctctacaacagggccgtgatgcccgcggcgcgccggtgcctcggccgcgccgtggcgttcacgccgctgcagctcatggggttcggccacgcgacggcggtcgtcgcggtgggcgtggccgcgtgcaccgaggcgcgccggctgcacgcggccagggccggggcgcccgccatgggcatcgcgtggctgctgccgcagtacctcgtgatggccgcctccgacgcgtcgctcaccgtcgggcagctggagttcttctacgaccagtcgccggagacgatgcggagcgcgtcgacggcgttctacttcctcgccatatcgctcgggaacctgctcaactctcagctggtgactctggtggcgaaggtgaccgcggtatggggcaatgcagggtggtttccactggacttggatgacggtcacctggattacttcttcctgctcatcgtggccatcaccgcggtgaacttcgcagtttacgtcgccctcgccaagaactacacgccaaagaaggttaggtag</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0597400, RefSeq:Os04g0597400