Os04g0599000

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Revision as of 11:26, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0599000| Description = EGF-like, type 3 domain containing protein| Version = NM_001060282.1 GI:115460293 GeneID:4336863| Length = 2872 bp| ...")
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Gene Name

Os04g0599000

Description

EGF-like, type 3 domain containing protein

Version

NM_001060282.1 GI:115460293 GeneID:4336863

Length

2872 bp

Definition

Oryza sativa Japonica Group Os04g0599000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:30618814..30621685

Sequence Coding Region

30619162..30620291,30620415..30620567,30620678..30621533

Expression

GEO Profiles:Os04g0599000

Genome Context

<gbrowseImage1> name=NC_008397:30618814..30621685 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:30618814..30621685 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcaaagatgatgctttaccttcttctcctgccattgctcctcctcacatgcatctttgcatcttatgttcattcgatggaatcaagcacctccaagtgctccaatattcccatcccttatccctttggtattcttggtgggaaccctgccccagcccaagggtttgagatcacatgtgcctcatctggcccgatggtacgcattaacaatatcatgtttgggattcttaacatctcgttgctggatggttttgtaagcatcttggccagtgccacttctcagcagtgcaaaaggaattctagcttcagccttgaggggaccaatttcacgttctcagatacaagaaacaaatttacagctctgggttgtgatatggtagccatgctattgaacggtagcagcgggtatagcggtggctgtgcttctttttgctccaccaaaagcaatataattgatggtatgtgctctggcgtggcttgctgccaagcaccagtaccgaaggggttaaagaagcttgagttggagttcactaacataactgggcagctcagcaggcccaaggaggtcaataatactccaacatgtggcgaggctttcatcgtggagcagaactcctatgttttctctagtgttgatctgagcaacactaacaggaacaatcctcaataccgccctgttgttcttgagtggtccattgatggtggctactgtgaggaggcgaaccgcttcatgtcatatgcctgcaaggagaactcctactgctataactcatcaaatggaattggataccgctgcaattgctcccttgggtttcaggggaacccttacttgcaagggcccgatggatgccaagatattgatgaatgcaccattaagaggccatgcacgcataagtgcatcaacacgaaagggagtttctactgcatgtgcccagcagggatgagaggtgatggcttgaaggagggcagtggctgcaatggaattggcacactgttgattggaatagttactggactagctctgctactgcttctccttgttctcatattctggacccattggcttgttaagaagagaaaacttgcgaagataagacagagatactttatgcagaatggtggaatgttgctgaagcagaagatgttttctcaaggtgcaccactgcggatatttacttctagtgaacttgagaaagcaaccaacagcttcagtgatgacaatatcattggtcgaggtggatttgggatcgtgtacaaaggtatattatccaatcaaatggttgtggcaatcaagaaggcgcagcgagttgatcagaaccaaatggaacaattcataaacgagttggtcattctttcacaagtgaaccacaagaatgtggtccagctattaggctgttgtcttgagacagaacttcccttgttagtttatgaattcatcaccaatggggcccttttttctcatcttcaaaatacatctgtcctgatttcatgggaggaccgcctaaggattgcagttgaaactgcatcagcacttgcatacttacacttagctacaaaggaaccaattattcacagggatgtcaagtcatcaaacatactccttgacgagaacttcactgcaaaggtgtctgattttggtgcctcgaggccaataccacacaaccagacccatgtgacaactttagtgcaggggacattggggtacatggaccctgaatatttccaaacaagccagctaactgagaagagtgatgtatacagttttggggtggttcttatcgagctattgacaagacagaaacctatatctgatggtaggacagatgatgtgagaaatctagcatgtcattttagtatgttattctatcagaaccagttgttggaaattgtagattctcaagtagctgaggaagctggcacgaaacatgttaaaaccgttgcacaattggctttacgatgcttaaggtcgagaggtgaagagaggccaaggatgatagaggtggcaattgaacttgaagctctgagaaggctgatgaaacaacacttggtcctgcagaccgaagaagaccctctgctctgcgaatcaggtcagcatgcagatgtaaacatcgaagcatcctccgagtttgagccttga</cdnaseq>

Protein Sequence

<aaseq>MAKMMLYLLLLPLLLLTCIFASYVHSMESSTSKCSNIPIPYPFG ILGGNPAPAQGFEITCASSGPMVRINNIMFGILNISLLDGFVSILASATSQQCKRNSS FSLEGTNFTFSDTRNKFTALGCDMVAMLLNGSSGYSGGCASFCSTKSNIIDGMCSGVA CCQAPVPKGLKKLELEFTNITGQLSRPKEVNNTPTCGEAFIVEQNSYVFSSVDLSNTN RNNPQYRPVVLEWSIDGGYCEEANRFMSYACKENSYCYNSSNGIGYRCNCSLGFQGNP YLQGPDGCQDIDECTIKRPCTHKCINTKGSFYCMCPAGMRGDGLKEGSGCNGIGTLLI GIVTGLALLLLLLVLIFWTHWLVKKRKLAKIRQRYFMQNGGMLLKQKMFSQGAPLRIF TSSELEKATNSFSDDNIIGRGGFGIVYKGILSNQMVVAIKKAQRVDQNQMEQFINELV ILSQVNHKNVVQLLGCCLETELPLLVYEFITNGALFSHLQNTSVLISWEDRLRIAVET ASALAYLHLATKEPIIHRDVKSSNILLDENFTAKVSDFGASRPIPHNQTHVTTLVQGT LGYMDPEYFQTSQLTEKSDVYSFGVVLIELLTRQKPISDGRTDDVRNLACHFSMLFYQ NQLLEIVDSQVAEEAGTKHVKTVAQLALRCLRSRGEERPRMIEVAIELEALRRLMKQH LVLQTEEDPLLCESGQHADVNIEASSEFEP</aaseq>

Gene Sequence

<dnaseqindica>1395..2524#1119..1271#153..1008#tattttgagtaacgtgcccaagtggttcctcaggttgtgagcctgtgacctatttaacctccgatttccagtccattctcctccatgatccaaactttccatcctagttgatagcagtattgccatggtctattttttcttgttaaagactaatggcaaagatgatgctttaccttcttctcctgccattgctcctcctcacatgcatctttgcatcttatgttcattcgatggaatcaagcacctccaagtgctccaatattcccatcccttatccctttggtattcttggtgggaaccctgccccagcccaagggtttgagatcacatgtgcctcatctggcccgatggtacgcattaacaatatcatgtttgggattcttaacatctcgttgctggatggttttgtaagcatcttggccagtgccacttctcagcagtgcaaaaggaattctagcttcagccttgaggggaccaatttcacgttctcagatacaagaaacaaatttacagctctgggttgtgatatggtagccatgctattgaacggtagcagcgggtatagcggtggctgtgcttctttttgctccaccaaaagcaatataattgatggtatgtgctctggcgtggcttgctgccaagcaccagtaccgaaggggttaaagaagcttgagttggagttcactaacataactgggcagctcagcaggcccaaggaggtcaataatactccaacatgtggcgaggctttcatcgtggagcagaactcctatgttttctctagtgttgatctgagcaacactaacaggaacaatcctcaataccgccctgttgttcttgagtggtccattgatggtggctactgtgaggaggcgaaccgcttcatgtcatatgcctgcaaggagaactcctactgctataactcatcaaatggaattggataccgctgcaattgctcccttgggtttcaggggaacccttacttgcaagggcccgatggatgccaaggtaacgaatacattcatgctagttacctcagcttatgtttcttgaatttagtagtcagcaagaatagctcatgcctgatttcgtctggtttcatgtgatttttttataagatattgatgaatgcaccattaagaggccatgcacgcataagtgcatcaacacgaaagggagtttctactgcatgtgcccagcagggatgagaggtgatggcttgaaggagggcagtggctgcaatggaattggcacactgttgattggaataggcaagtttctgaagccctgtatcactgccttgccatgtgaatgatgtaatcattcaatttgaaggcttgagttgattaatgctgcatccagtagagatccctgaattttctgtgtctgtgcagttactggactagctctgctactgcttctccttgttctcatattctggacccattggcttgttaagaagagaaaacttgcgaagataagacagagatactttatgcagaatggtggaatgttgctgaagcagaagatgttttctcaaggtgcaccactgcggatatttacttctagtgaacttgagaaagcaaccaacagcttcagtgatgacaatatcattggtcgaggtggatttgggatcgtgtacaaaggtatattatccaatcaaatggttgtggcaatcaagaaggcgcagcgagttgatcagaaccaaatggaacaattcataaacgagttggtcattctttcacaagtgaaccacaagaatgtggtccagctattaggctgttgtcttgagacagaacttcccttgttagtttatgaattcatcaccaatggggcccttttttctcatcttcaaaatacatctgtcctgatttcatgggaggaccgcctaaggattgcagttgaaactgcatcagcacttgcatacttacacttagctacaaaggaaccaattattcacagggatgtcaagtcatcaaacatactccttgacgagaacttcactgcaaaggtgtctgattttggtgcctcgaggccaataccacacaaccagacccatgtgacaactttagtgcaggggacattggggtacatggaccctgaatatttccaaacaagccagctaactgagaagagtgatgtatacagttttggggtggttcttatcgagctattgacaagacagaaacctatatctgatggtaggacagatgatgtgagaaatctagcatgtcattttagtatgttattctatcagaaccagttgttggaaattgtagattctcaagtagctgaggaagctggcacgaaacatgttaaaaccgttgcacaattggctttacgatgcttaaggtcgagaggtgaagagaggccaaggatgatagaggtggcaattgaacttgaagctctgagaaggctgatgaaacaacacttggtcctgcagaccgaagaagaccctctgctctgcgaatcaggtcagcatgcagatgtaaacatcgaagcatcctccgagtttgagccttgataacattaccaaggaggaggaaagcatggacaccattctactcccattcagggccctctcatgttagtcctcccagcacaaatggttttcccttagttattataactcagtccccagtttcatgacaatgattttctgtgttgctctgagctgccaatcatgtagaaacccagagacgggtatactaggaataattggagagtgttgtcgaactccaatgtctgttcaactatttctcagaaagaaatatctgatcctttcagaagtcaatttggtcttaacatggtggttaaagtaattcatttggaatgtaccaaactttataaagaaatgataggttagtttccc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0599000, RefSeq:Os04g0599000