Os04g0599400

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Revision as of 11:26, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0599400| Description = Scramblase family protein| Version = NM_001060285.1 GI:115460299 GeneID:4336866| Length = 4950 bp| Definition = Ory...")
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Gene Name

Os04g0599400

Description

Scramblase family protein

Version

NM_001060285.1 GI:115460299 GeneID:4336866

Length

4950 bp

Definition

Oryza sativa Japonica Group Os04g0599400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:30640142..30645091

Sequence Coding Region

30640224..30640538,30640870..30640956,30641349..30641390,30641499..30641543,30643342..30643407
,30643472..30643528,30643639..30643700,30643831..30643951,30644365..30644442
,30644569..30644675,30644777..30644807

Expression

GEO Profiles:Os04g0599400

Genome Context

<gbrowseImage1> name=NC_008397:30640142..30645091 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:30640142..30645091 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaggtggctgccccggctgctctcccacgccgcggcggctgggagggccacggcgaggaccactggcagccatgccaggggatccaatgggttcgcgagcggccgcgggggcagcgatggtgcggtggtgcctcgggagtggctacggaagctgtggaccgaggagctgaggaggcagagggatgctgcgaggcggtgggggaggcgcgcggtcgcgaccaccgacggcggcggtgcggattcgttcagcgatttcgccagggcgccgtcgaggagctaccagcacgacgaccgggacctcacgcccgtagaggccaaactaaagcctctcctctcaagggccaacctccttatcgctagggacatagaatgggcaaatattgtgttggctttcgagcaggagagtagatatatcataatggatccgctctttcctcaatcacctgttggtttcattcgagagaaaagcaatgtcatatttaggcagctatttcgctcaagaaggccatttgttgcagaaattactgatgctatgggcaatgagatcttcacggttcgacggccattttggcttatcaacagttccatttatgcagaagtgaatggcaaggaggtaggcgtagtccacagacgttggcatctctggcgtagaatttatgacctgtacttagggaataggcaatttgctgtggtcgagaatcctggattttggaactggacctttactctcactgatgaggatgacaatgtactagcccagattgatcgtaattggaggggaatcggttttgagctcttcacagatgctggccagtatgcaattcgatttggtgatgcaggactaaaccgtaaatttggtctcgcttcagatatcgatgaactgcatgttgttcgccagctgagtttacctgaaagggctgttgcacttgctcttgctgtgtctctggattgtgattatttttcaaagagaggtggctggggacttccttttcttattgccacagagtag</cdnaseq>

Protein Sequence

<aaseq>MRWLPRLLSHAAAAGRATARTTGSHARGSNGFASGRGGSDGAVV PREWLRKLWTEELRRQRDAARRWGRRAVATTDGGGADSFSDFARAPSRSYQHDDRDLT PVEAKLKPLLSRANLLIARDIEWANIVLAFEQESRYIIMDPLFPQSPVGFIREKSNVI FRQLFRSRRPFVAEITDAMGNEIFTVRRPFWLINSSIYAEVNGKEVGVVHRRWHLWRR IYDLYLGNRQFAVVENPGFWNWTFTLTDEDDNVLAQIDRNWRGIGFELFTDAGQYAIR FGDAGLNRKFGLASDIDELHVVRQLSLPERAVALALAVSLDCDYFSKRGGWGLPFLIA TE</aaseq>

Gene Sequence

<dnaseqindica>83..397#729..815#1208..1249#1358..1402#3201..3266#3331..3387#3498..3559#3690..3810#4224..4301#4428..4534#4636..4666#cctttcagcgaccgcacagaaaccttctcttctagaatcctctagaacctcttgacctcccccgcctctgcagttccctccgatgaggtggctgccccggctgctctcccacgccgcggcggctgggagggccacggcgaggaccactggcagccatgccaggggatccaatgggttcgcgagcggccgcgggggcagcgatggtgcggtggtgcctcgggagtggctacggaagctgtggaccgaggagctgaggaggcagagggatgctgcgaggcggtgggggaggcgcgcggtcgcgaccaccgacggcggcggtgcggattcgttcagcgatttcgccagggcgccgtcgaggagctaccagcacgacgaccgggacctcacgcccgtagaggtaagcggggtttatttatctgtttatagtctgttccactgttattttgcactatcattcaacatagtccgattgctgatgctatcgttggaattgctggacactttttttttttaacgaacaagatggacacttttgtgggcaggtgggatgggaggttaattgaccgatcagttaattgtctatatttgtttatttacctatttacagttagatttaatggtcgatgtttatcctacatgagctgtttcgtcatgttgaaattatgtgtaatcaactaatcattatctagagttacttgattaactgagactttcctgtgggtttgcaggccaaactaaagcctctcctctcaagggccaacctccttatcgctagggacatagaatgggcaaatattgtgttggctttcgagcaggtaatgtatctgtgtctcatttactcatttacatgtactgaagttgcgactctaggatgcttctcttgctgtgtttggaaatgaaatagtaacttgtgttcaattgtccttgctatattgtttttgttactgtataaagcaaccggcagttttcacgtgattcatggaggatagctcatacttgaataagtgcttcatttcttgggtaaaaaactgaaagaagtgacataattcattttaccagcaacaaaattacataattcattctgcgcttcagaatatatgcacatttatttgggacattgatattttctcccagttttcgaattatgtcttttgattgtttcagactttcagcctgttatcacttactgttattactcgtactgcaggagagtagatatatcataatggatccgctctttcctcaatcagtatgtgtactcagattttcattggttccgttgctgtattactctgttgttgtattattttattgtcttagcttcattattgacttgtattttttgtcgaatttccagcctgttggtttcattcgagagaaaagcaatgtcatatttaggcaggtatgtctcgtgattaatttatcctaaataagttaataccgtagtagctcatgtctcatggccttgttctttacttcaaagtaacttagtggaaaagagacaggattttgattctttaaattctctgcgtagcagtacttaagttcgaacatatatgatttcatgttctaaatattaaactagtgtcataatctcataatatgttgaacttttcaaattaactattattgtatgctctaatgtatagtgtgatatttgtactagtgtgcttagtcagcatcgactttattttatttctttataaaatattatcatgatcttatatcatgcatgatgtcctattgagttatgcatttctcttcctagtgctaaagaacagctgttgatttttagtaggttagacagatccctttcttttagctatagcaccagtaatgactccttttcttttgtgttgaatgattttttggttgctctctttgctgggcaaggagtctcttgccacgttttcctgtaatgatcgatgctacaaactttcagttagggtggctgtgatgtggtatgtaaaatttcacaatgtgtataatgtggtgggactcatgcaatgttatgtagaatttttcgctgggccggcaaaagaaaaccggccaagttttgtattaagaaggagagaaagttttacaacagaccctaaaccagaaatggcttaggctacagaaaaatttcacatcgatttagacaacagacaagcacagctgctaaaaccttagcaaattagccgccagcgattgcactcagtagcccagcagccttccatgtttccacttgtcgacaattgtggcacaaaggtgaaccgctgaagtagctcgtccatcaaacacatgcgcattcctttccttccaaactatccatgttaccaagataaccccagcatcaaaggtcctccgatccatcttgtgaactgatttgcgcgcttcacaccaccaatccaacaggtcatccatgggggaaacacaggagagtcccaggcgactcctgaccctcgtccaaactgccctcgtgtactcgcaagcatggaaaatatgggtgcatgattcagcatccttcccacaaaggtgacagtatggggccaagtgccatcctcgccgctggaggttgtccgccgtcaggcatgctccacgcatggagtagtagtatctagctatagagactgggaaaatagagatatggaagggaatgctttggagaggggcgcaaggctgtaacttgtgggtgtttgaattttttttcaaaaactatttaccctcccatttttaatgatctaacatgtcaatatgttaccatgttaagtgattactgggatgcaggggatgggctatatctgtgcttttgttctgattcaacttaatggaaacatactttacatcttctttcagagaaatatcaactcctccagttatcatgcagaatgttttatgtataatttgttttatcgatctggtagatttgaggtatagcataaaggttcattagagaaccttaactagctattaatagcagtagtttaaaaagaagtgttctctattgtacatgttcggcttgtttatttgatctggacttgttgattacatcgtttcaaaatttgttgcttattatcttggttgttgtataacttttcattgtgatgataaaaactaaatatgtatcaagtttgtgtaactgttgtgcaaaaaggtattgtgtttatttacccattccttatctttgatgtacaagaaacattttgctaatgtttcagctatttcgctcaagaaggccatttgttgcagaaattactgatgctatgggcaatgagatcttcacggtactatttcataaatttattactgcactcctttgcaaatatgttcttacaccatttaattcaggttcgacggccattttggcttatcaacagttccatttatgcagaagtgaatggcaaggtatgcaaaaattctttacttgcttctacaaatttatttagatgggaatgttgccatcagattgtttcacggaatgtactgacattgtttcacggtttcaatttggttaggaggtaggcgtagtccacagacgttggcatctctggcgtagaatttatgacctgtacttagggtaatttgatcttctgatctctatgttcccttgtttcatagactaaactcaaattactcaattctttgtgtaccttttagtattgctttactgcctgacagcttggtctgccaccttttgtgttctttaggaataggcaatttgctgtggtcgagaatcctggattttggaactggacctttactctcactgatgaggatgacaatgtactagcccagattgatcgtaattggaggggaatcggttttgaggtaaatatcttttctagtagagaattgtcaaataatatgctttttcttttatgttggtgggcattccatgcttatctgacaagaaaaaccagatacatatagattcattatttacagattgatagtaagaactgcccttccaaatttatatgatggtgttgcttttttacattgcttgaagtttttttttagagaactcatgaattatacaggacatgctcattgtgcagtattttgaatttgctttgtggtgactccacatattgtgcagtttgatccaagctgatggcagatgccacaccccacatcttttcagagtgcattgtttcatttgttgcgcactgctacttctagcctgcataaaaaatgggactgaacttttaaggactgaatgtatctctggttcactgcagctcttcacagatgctggccagtatgcaattcgatttggtgatgcaggactaaaccgtaaatttggtctcgcttcagatgtaagtgctgttctcattttagtacttcacaagccacgcattgagtgaatatttttttgttgcctaccttgcctagttaactgctatttacctgatcgagatccatgtcacaaattatggtcacagatcgatgaactgcatgttgttcgccagctgagtttacctgaaagggctgttgcacttgctcttgctgtgtctctggattgtgattatttttcaaagagaggtggctggtaagtgccgtgtgaacttaacctgtgtagacggttcctctgtaaattttggtttaactactgttgttgggaaactgattgaaatgccctttttctttcaggggacttccttttcttattgccacagagtagacgcatatgacctactaccattttcagcacaagaggaaaaccgatgaccttcacattgttgattagtgaagaaacttaatgggtcgactattttgcgcgattgagatcgttaccgaagcacgaaacggttttttgtgtcactgcatgtgctctgctcacttcacctgtcttctagtacgtgtgaatttcgaaagcagatgtcacccgaagaagtttgagcttaacatccaactcgattccgttttgctacagtacaacttgcagcgatgcagtagctcttcatt</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0599400, RefSeq:Os04g0599400