Os04g0602000

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Revision as of 11:26, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0602000| Description = Conserved hypothetical protein| Version = NM_001060303.1 GI:115460335 GeneID:4336885| Length = 3039 bp| Definition ...")
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Gene Name

Os04g0602000

Description

Conserved hypothetical protein

Version

NM_001060303.1 GI:115460335 GeneID:4336885

Length

3039 bp

Definition

Oryza sativa Japonica Group Os04g0602000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:30780213..30783251

Sequence Coding Region

30780213..30782028,30782711..30782776,30783100..30783251

Expression

GEO Profiles:Os04g0602000

Genome Context

<gbrowseImage1> name=NC_008397:30780213..30783251 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:30780213..30783251 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaggtggctgcgccgtggcgatcactcgtcaatggagcgcggcggcggcagcagcagcagcaggcgccgctccctctcccgcgaaccgtcgtcagctgtgcaggagcggggacgggggctgcatcgcggcgcctcgccgccggcggcaccgcgcgtgggagcggaggacggctcctcgacgcgccgtctcgggaggatggactccgggttgtctgtgaacttggtgccgccgccactggcgccgcgacatggctgtcagcgaggcggacgcggcgcggcagcaacgacgaagctgtcctcatcgacggacgcggctgtcacgatacgcagcagcatcaggccgagctcccgggaattcatggagcggtccccccgtcgagctggtgaagctgaaaacgataggaaggaagttgccgatgctgcccggccaagccgtggtgaactctcgtcgatggagcgcggaagcagcagtcgccgatcactctcccgcgaaccgtcgtcagctgttcaggagcgtggacacgggccgcatcgcggcgcctcgccgccggccgcaatgcgcgtcggagcggagggctcctcgacgcgccgcatcaagaggctggactccaggttgtccgcgagcatggtgtcgcgtcgtggcactccgcgaggcggacgcggcgcggcaacgccgaagctgtcctcgtcgaccgacgcggctgccacgacatgcagccgcatcaggccgaacagtgacctcacggagcgctccctacgccgagctagtgaagctgatgaagacgagagcccgcgacagcgccgggggaaggggaaggagaaggagaaggccgatgacgatgctgccagcgtcagcatgggccggccaagccggccgccgcggcgagctctgaaccggatcaactccggcagcacgtacagcagcagcagcccaccagaaccgacttcgagcacttcaggttacacctcctcgtgggtgccaccgcgagacaaagtgccgtcatgggtgccaccgccaccgcggggcaatgcgccgtcttgggtgccaccgccaccgcaaccgcggggcaatgcgccgtcgtgtgtgccaccaccaccgcaatcgcggggcattgcgccgccggagtacgggtttcaagtgtcaggcgtgtcgaggatcagctgccaccttcgcctggagaggagagtggagcggatgaggaggttcaaggagaagctcggcacggtgttccaccacctccaccaccaccaccacttcggtccctcgggcagcaacgagggggcgcccccgctgctcagtcgtgacgtccacgacaacggccttcaccgcccgtcgccgtggaaggttctcggcggtgtcctccaccgcgcgacacgccgtggggagaagaagaccaggagcgtgccggcagatcggcgtggcggcgtcgagcacatgctgttacacatgtgggacaaacggcgggcgatggcgaagcagcgtggcgacggcggcggcggcggcgtcgggcgcgcactgttccaaatgtggggcaaacggcgggcggcggccaagcggcgtggcggcggcgtcgggcgcgcgctgttccaaatgtgggtcaaacggcgggcgacggcgaagcgacggcgtcgggcatgcgctgttccaaatgtgggtcaaacggcgggcgacgacggcgaagcggcgtggcagcgacggcggcgtcgggcgcgcgctgttccacatgtgggggaaacggcgggcgaccgcaagcgctggaatgtggggtacgggaagccggtggaaggccaagaagctgcactggtggcagcggggctcccaggtgttctatttgtgcttcctgattcctatgttgatgccgagaacaaggactatggtgctgagttgtttgtaaacggagaaattgttcaaagatcaccagaaaggcggagaagggtggagccagttcctcagagagcacaagatagaccccggtacagtgaccgaactcgctatgtgaagcggagggagaatcaggcgtaccagcggtga</cdnaseq>

Protein Sequence

<aaseq>MRWLRRGDHSSMERGGGSSSSRRRSLSREPSSAVQERGRGLHRG ASPPAAPRVGAEDGSSTRRLGRMDSGLSVNLVPPPLAPRHGCQRGGRGAAATTKLSSS TDAAVTIRSSIRPSSREFMERSPRRAGEAENDRKEVADAARPSRGELSSMERGSSSRR SLSREPSSAVQERGHGPHRGASPPAAMRVGAEGSSTRRIKRLDSRLSASMVSRRGTPR GGRGAATPKLSSSTDAAATTCSRIRPNSDLTERSLRRASEADEDESPRQRRGKGKEKE KADDDAASVSMGRPSRPPRRALNRINSGSTYSSSSPPEPTSSTSGYTSSWVPPRDKVP SWVPPPPRGNAPSWVPPPPQPRGNAPSCVPPPPQSRGIAPPEYGFQVSGVSRISCHLR LERRVERMRRFKEKLGTVFHHLHHHHHFGPSGSNEGAPPLLSRDVHDNGLHRPSPWKV LGGVLHRATRRGEKKTRSVPADRRGGVEHMLLHMWDKRRAMAKQRGDGGGGGVGRALF QMWGKRRAAAKRRGGGVGRALFQMWVKRRATAKRRRRACAVPNVGQTAGDDGEAAWQR RRRRARAVPHVGETAGDRKRWNVGYGKPVEGQEAALVAAGLPGVLFVLPDSYVDAENK DYGAELFVNGEIVQRSPERRRRVEPVPQRAQDRPRYSDRTRYVKRRENQAYQR</aaseq>

Gene Sequence

<dnaseqindica>1..1816#2499..2564#2888..3039#atgaggtggctgcgccgtggcgatcactcgtcaatggagcgcggcggcggcagcagcagcagcaggcgccgctccctctcccgcgaaccgtcgtcagctgtgcaggagcggggacgggggctgcatcgcggcgcctcgccgccggcggcaccgcgcgtgggagcggaggacggctcctcgacgcgccgtctcgggaggatggactccgggttgtctgtgaacttggtgccgccgccactggcgccgcgacatggctgtcagcgaggcggacgcggcgcggcagcaacgacgaagctgtcctcatcgacggacgcggctgtcacgatacgcagcagcatcaggccgagctcccgggaattcatggagcggtccccccgtcgagctggtgaagctgaaaacgataggaaggaagttgccgatgctgcccggccaagccgtggtgaactctcgtcgatggagcgcggaagcagcagtcgccgatcactctcccgcgaaccgtcgtcagctgttcaggagcgtggacacgggccgcatcgcggcgcctcgccgccggccgcaatgcgcgtcggagcggagggctcctcgacgcgccgcatcaagaggctggactccaggttgtccgcgagcatggtgtcgcgtcgtggcactccgcgaggcggacgcggcgcggcaacgccgaagctgtcctcgtcgaccgacgcggctgccacgacatgcagccgcatcaggccgaacagtgacctcacggagcgctccctacgccgagctagtgaagctgatgaagacgagagcccgcgacagcgccgggggaaggggaaggagaaggagaaggccgatgacgatgctgccagcgtcagcatgggccggccaagccggccgccgcggcgagctctgaaccggatcaactccggcagcacgtacagcagcagcagcccaccagaaccgacttcgagcacttcaggttacacctcctcgtgggtgccaccgcgagacaaagtgccgtcatgggtgccaccgccaccgcggggcaatgcgccgtcttgggtgccaccgccaccgcaaccgcggggcaatgcgccgtcgtgtgtgccaccaccaccgcaatcgcggggcattgcgccgccggagtacgggtttcaagtgtcaggcgtgtcgaggatcagctgccaccttcgcctggagaggagagtggagcggatgaggaggttcaaggagaagctcggcacggtgttccaccacctccaccaccaccaccacttcggtccctcgggcagcaacgagggggcgcccccgctgctcagtcgtgacgtccacgacaacggccttcaccgcccgtcgccgtggaaggttctcggcggtgtcctccaccgcgcgacacgccgtggggagaagaagaccaggagcgtgccggcagatcggcgtggcggcgtcgagcacatgctgttacacatgtgggacaaacggcgggcgatggcgaagcagcgtggcgacggcggcggcggcggcgtcgggcgcgcactgttccaaatgtggggcaaacggcgggcggcggccaagcggcgtggcggcggcgtcgggcgcgcgctgttccaaatgtgggtcaaacggcgggcgacggcgaagcgacggcgtcgggcatgcgctgttccaaatgtgggtcaaacggcgggcgacgacggcgaagcggcgtggcagcgacggcggcgtcgggcgcgcgctgttccacatgtgggggaaacggcgggcgaccgcaagcgctggaatgtggggtacgggaagccggtggaaggccaagaagctgcactggtggcagcgggtgaggccacggcgccgttcaggacatggaaaggcattgcggtaacatggtactggtagaatctgtgtctctactattttgaaacaaattttaaattgtagaagtttgctataatttaagacgaatggagtagcttatttgtaatttgtttcacagcttattgctctataagaaacaatgcaatatattttcattagaagcaaatattcctctctcaatccaggggttaaagttagtccattctcacagcgtgggaacctaaaagaaattcattgtcattactagacgaaggggtacagcttaatcatcaaagctaacaatcctagtatgtaaatttcagctatcgcataaataagaaataatatgtagatagtaaaggacaagggaaattttgagaaccgtactttactaaaaatcttatgtattgcggtacatgtgagtttatcttttttggcatcacgaaaataatgtttgatatctaggaacagtatagtgctccgttgaatgctaaagaatcaataacttgtctgaataatttaccccttacagctgatggtgtatgtagtcataggcatttgcatatgtgcatgagtgcatatgttgaatgcccataactactctaaatagataatttgttgttgaatattgctgtgacggtttgtaagatgtttgcatttgacagggctcccaggtgttctatttgtgcttcctgattcctatgttgatgccgagaacaaggactatggtggtaagctttttgttacctacctctctatatcattttttttcttgtgtaaaatgcagttgattttaccctggctgccatgttaatggatatccttcatggaaagctggttgtttttatcttggtcttgtccgctttctgttccaggtttattgcacccagaatccattcatctttaactgtttgtgcttacttgtactaccatagttgatctatccagacctgaaatatacactgacattctgcatagttgattgtcttcaggaattattcctccaatatgcacaactttgtctgggttctcatgtcattgtcgttctttgcagctgagttgtttgtaaacggagaaattgttcaaagatcaccagaaaggcggagaagggtggagccagttcctcagagagcacaagatagaccccggtacagtgaccgaactcgctatgtgaagcggagggagaatcaggcgtaccagcggtga</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0602000, RefSeq:Os04g0602000