Os04g0602100

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Revision as of 11:26, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0602100| Description = Haem peroxidase family protein| Version = NM_001060304.1 GI:115460337 GeneID:4336886| Length = 2823 bp| Definition ...")
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Gene Name

Os04g0602100

Description

Haem peroxidase family protein

Version

NM_001060304.1 GI:115460337 GeneID:4336886

Length

2823 bp

Definition

Oryza sativa Japonica Group Os04g0602100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:30784035..30786857

Sequence Coding Region

30784190..30784306,30784399..30784494,30784697..30784781,30784869..30784903,30784996..30785061
,30785163..30785203,30785320..30785450,30785618..30785724,30785871..30786008
,30786127..30786261,30786405..30786515

Expression

GEO Profiles:Os04g0602100

Genome Context

<gbrowseImage1> name=NC_008397:30784035..30786857 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:30784035..30786857 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgggcgcgagcttcctctcgaccgtgcggcagcctcccgcgccgccgccgccgctgctcgccccacgcggctccgcttcctccgtctcgtctcccgcgcgacggcacgcccacattctggtgtgctgccatgctaccgcgcaggaagagcctgtgcgattccgtagaagggatttaatcggcggctgcttgactactgccattggcttggaattagtcgagggctctacaggattcacaggagtggctactgcagctgatctgattgagcgtcgacaacgctctgaattccaatcaagcatcaaaagcaccctcgccacagccataacggctaaaaaagagctcattccatctttgttgacgttggcactgaatgatgccatgacatatgataaggccacgaagtcaggaggtccaaatggatcggtcaggctaagtgcagaaataagcagacctgaaaacagtggactttctgctgctgtggatctgctagttgaagcgaaaaaggagatagattcctactccaagggaggacccattgcatttgcagatctgatccaatttgcagcacaatcagcactcaagctaacattcgttgatgcggccattgccaaatgtggcgggaacgaagaaaaaggaagaacactatactcagcttatggttcaaatggccagtggggtttattcgacaaactgttcgggcgacaagatacacaggaacctgatcctgaaggaagggtacctgactggagcaaagcttctgtgcaggaaatgaaggataagttcgtcgcagttggtttgggtcctcgtcagcttgctgtgatgtcagtcttcctggggcctgaccaagctgccacggaggaacggttgatagccgacaaggattgccgcccatgggtcgagaagtatcaacgcagtcgcgagacggtctctcgaactgactacgaggttgacctgataaccacgctcacaaagctgagctcccttgggcagaagataaactacgaggcctacacgtaccctaagcaaaagattgacttgggtaaattgaaattgtga</cdnaseq>

Protein Sequence

<aaseq>MAGASFLSTVRQPPAPPPPLLAPRGSASSVSSPARRHAHILVCC HATAQEEPVRFRRRDLIGGCLTTAIGLELVEGSTGFTGVATAADLIERRQRSEFQSSI KSTLATAITAKKELIPSLLTLALNDAMTYDKATKSGGPNGSVRLSAEISRPENSGLSA AVDLLVEAKKEIDSYSKGGPIAFADLIQFAAQSALKLTFVDAAIAKCGGNEEKGRTLY SAYGSNGQWGLFDKLFGRQDTQEPDPEGRVPDWSKASVQEMKDKFVAVGLGPRQLAVM SVFLGPDQAATEERLIADKDCRPWVEKYQRSRETVSRTDYEVDLITTLTKLSSLGQKI NYEAYTYPKQKIDLGKLKL</aaseq>

Gene Sequence

<dnaseqindica>156..272#365..460#663..747#835..869#962..1027#1129..1169#1286..1416#1584..1690#1837..1974#2093..2227#2371..2481#gtggtggaggcgggaaacttatcctgcttttgccttgcccccgtgtcttcgccacgccagccgccccccgcctgccgacgaggccgcggccgctgctcagttcaggctcagctcgaggggatcgtgcggttggttgcgcgaagcggcggcgagaaatggcgggcgcgagcttcctctcgaccgtgcggcagcctcccgcgccgccgccgccgctgctcgccccacgcggctccgcttcctccgtctcgtctcccgcgcgacggcacgcccacgtatgtgccctggaactcgcgggtgtagttttggtttgggctaaaaatgccgtgtgatttgtgtaatccttgggatttttttttccgtgtagattctggtgtgctgccatgctaccgcgcaggaagagcctgtgcgattccgtagaagggatttaatcggcggctgcttgactactgccattggcttggtgcgtaccactattcttcgtcccttttgtttgcgtgatcagtgtagtgtagtcttcttatactttattggagtaagaaagtgaatgaaatgtagtatggtgggggtaaagaatattaacctgcagttagtgcttttccttttccatgtttagtgttgttttcagaggcgataggcttaactacttcatgtcttttgattaggaattagtcgagggctctacaggattcacaggagtggctactgcagctgatctgattgagcgtcgacaacgctctgaattccaatgtaggtcacctctggccgttccttttcctttgaatgctatgtgcttctttccatgatagtaattcttgcttccgtttctttcttcagcaagcatcaaaagcaccctcgccacagccataacggtgagattgtatattttttgcacttccttaagtcatttttactttgacctatctatcgatttttccggctgaaatttgataaccctttgaaggctaaaaaagagctcattccatctttgttgacgttggcactgaatgatgccatgacatatgataaggtatggtctggcttcctgaatttaccggctgaaccctctgtccatacatggcacgcttggaaataacctgtgaaaaacggctatccaacactcttttttaggccacgaagtcaggaggtccaaatggatcggtcaggctaaggtagtagcttctgttggtacatatttgtgttgacgttgcaaatatgctcttcagatgaaaatctaacaagttgctcggcctcgtcattccttccttttcaccattaaataataaagtgcagaaataagcagacctgaaaacagtggactttctgctgctgtggatctgctagttgaagcgaaaaaggagatagattcctactccaagggaggacccattgcatttgcagatctgatccaatttgcaggtgtgacatactttggacataattttactagcacttgtgtaatattaccaaactggctctattttacctttgttattgtcaagacctcttttacaatagttggaaaggtaccaagaagtaatggacatagtaataaacacctcaaaatttgctttcaattgcaacagcacaatcagcactcaagctaacattcgttgatgcggccattgccaaatgtggcgggaacgaagaaaaaggaagaacactatactcagcttatggttcaaatggccaggtattccctataccatgtcactccgtgtgtcaaataacactacactatatgttaagtttcttctgtctgtctgtatgggcttagcttactaattcaaggtgccatatatttttatgttgatgctttgtttgcatttaccgctgcagtggggtttattcgacaaactgttcgggcgacaagatacacaggaacctgatcctgaaggaagggtacctgactggagcaaagcttctgtgcaggaaatgaaggataagttcgtcgcagttggtttgggtcctcgtcaggtcactagctactgtcttacatcgcttagcaaattgtgttactgatcaatcatttaatctataagaaactgtgatccagcaaacttgtctttaaatatgagatgattttgcatttcagcttgctgtgatgtcagtcttcctggggcctgaccaagctgccacggaggaacggttgatagccgacaaggattgccgcccatgggtcgagaagtatcaacgcagtcgcgagacggtctctcgaactgactacgaggtaagatcatctacctccgtcccaaaacatccggatatattgctaaaagttgctatattcaagatggagattgtaaccattcgtgctgcagggtaactcagaactcttgtagtgttgatgctgacatgtgttttgtatgtcaggttgacctgataaccacgctcacaaagctgagctcccttgggcagaagataaactacgaggcctacacgtaccctaagcaaaagattgacttgggtaaattgaaattgtgatggatagtttcctgatcatctctcagtctcggtgatgctgatacagtaacgaagagcttcatttgtttgcctaagaagagtgatttgatttggcagtgacattccgacatttttacacggcaataagtacggcatgtatagatggtttagattcactgttcccttcgctcttttctgaacttcaagaatcagacatgatgatttccatgagttgtgttctgtaaattctcttacttgtataatgtgaagaggcaatagcagccaagtggagtaatagacaatactgtttcttcaacagttctccaatataccaccatatcgctatgcggtatgtagccagcc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0602100, RefSeq:Os04g0602100