Os04g0603200

From RiceWiki
Revision as of 11:26, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0603200| Description = Similar to C-terminal zinc-finger (Fragment)| Version = NM_001060314.1 GI:115460357 GeneID:4336897| Length = 3341 bp...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os04g0603200

Description

Similar to C-terminal zinc-finger (Fragment)

Version

NM_001060314.1 GI:115460357 GeneID:4336897

Length

3341 bp

Definition

Oryza sativa Japonica Group Os04g0603200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:30838000..30841340

Sequence Coding Region

30838347..30838363,30838461..30838611,30838762..30838833,30838982..30839731

Expression

GEO Profiles:Os04g0603200

Genome Context

<gbrowseImage1> name=NC_008397:30838000..30841340 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:30838000..30841340 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatgatcacatgggaagacggacagttggtggccttctcttcaccaaggggggctcaattcttctcttcagagaagacagtgcgcgtcacaaggccaccaattgctgcacgcgacacggttgcagcagcaagcatttggccggcaaagacaagcaaacacacagggcagcaacagcagccaaggaagcatcagaaacccctcggagatcacagattttcaggaaacccagcacgaggactcctcagggaagtactgctactgataacatcagcaggaatgcagcaagctcctatagcgaaaacgacaataggccaagagaaactccagggcgtgatttaatcgctcgtctcaaagagagggtcaatgcatcaagaaaacgatcattgaacagagaaaacagtccatcatcaccaaatggattaagtgctacttcctcaagtagtagccgcacagtctcaagaccgtcgcatcgggcagcttcccgaataaggaaggcagatgaaggtgcaaatgcaggagctgtaaatgtacgcagagacagcagtggagataccaggaggaattcagatagggatgtcgatgatttcttgctagttgagcaggcagcaagagatagcactgaaggattcatatctggattcttggcaagatacagaagtaatcatcagggactactttcatctttggacgacagcatagaggatgcaaatgggtactggcgcttcaatatggaaggaagtgaagagcttgagaactacttcatattcaatgatcggtacagagggatgagaatggacattgacggcatgtcttatgaggaattgctagcattgggagatagaattggcaccgtaagcactggcctttcagaagacgcgctgtccaagtgtctagacagaagcatgtacatggccactacttcaggaactcatgaagattgtgagagaaaatgcagcatatgccaggcaagaatattcagatggtga</cdnaseq>

Protein Sequence

<aaseq>MDDHMGRRTVGGLLFTKGGSILLFREDSARHKATNCCTRHGCSS KHLAGKDKQTHRAATAAKEASETPRRSQIFRKPSTRTPQGSTATDNISRNAASSYSEN DNRPRETPGRDLIARLKERVNASRKRSLNRENSPSSPNGLSATSSSSSRTVSRPSHRA ASRIRKADEGANAGAVNVRRDSSGDTRRNSDRDVDDFLLVEQAARDSTEGFISGFLAR YRSNHQGLLSSLDDSIEDANGYWRFNMEGSEELENYFIFNDRYRGMRMDIDGMSYEEL LALGDRIGTVSTGLSEDALSKCLDRSMYMATTSGTHEDCERKCSICQARIFRW</aaseq>

Gene Sequence

<dnaseqindica>2978..2994#2730..2880#2508..2579#1610..2359#ctctctcttccttttctcttccttctcaccgatcctggaatggtctcggagggttcttagctggcttttcgattggattagcagcagccgggtcagacggagcggaggccgtgccggagaagggagaaggaaaggttggccgctgttctttcaccttgtatgtgtggattgttcagatgttacctgtgttgttgtctctgtcgtccgatggacgggtccgtgtgattgtgttcgtggttttggctcttgaattgttctgtgatgaacggttcgggggtctgtgtttgtgatcatggtttctcctgaattcagaggtcagaggaaggtgattgcgtatggtttcggtgttcgtttttttaacctttctagttttgtgttcttgtgaatttggtttcttccttttccctgcgagtattggcacacggaaaggttttagaataaagttggtgatgatcatcgtcgatcgatccttgtattagtttcttgggatttgcaaggctgtgtgggggtccatggaagttctgatttcttgttcttcgcgacccaatcgtatttgtttttcttcttcttcatcatcctcgaatatccctctgtttttttttgtttttgcgtgccaaactaagcaaaagaggagtttgttaatactccactgaaatttgttttttaaactgcatgttctgattgcttctatggtcttaaacccaacacttttctattccaagtaatcatttttactttaatagtttttttatcctgcatgttctgattgcttctatggtcttaaacccaaaaatttctgttccaagtaatccatttttacttttccagtttttattcagttaaaggcagatatgttcgttaaaaaagatactgtttcctctgggactatatgaagtttcctgttgaatccgtacatatcaattgccttctcatacatctgaatatctgattcctgaaaataggaagcagtacaactttccgtcttcatacagtaccaagctaagccatgctagcctgctagcgaaggaattgacctttcagaataaaaggtcaattatctcaactagataggattatagggaaaaagttgtagtagcaaccttctttggttgacatgttagatgtttggttcttttataagcaggaaaacttacaaaaagggtagactaaataatcataggtaaaaaactagggtacatgaaggtttacctatctgaaggttcagagtttacatctctggatattttggttcagttggaaatgcgttgcaacttcaataaaccaacgacataatgcatggagattagtactactgatatgcatacctactatcattagcagttttggtcaaagttgtatatttattagacaatggatcatagaacgcaccagaatgtccatatcacaggttcgttggcagtagtttgaaattttttcattacctgttaccggaattcttttctccagaagaacaacgcgctaccagaatttaccatgcttatatgttgaacataaatacactccatcagttcgatcatggagttatttccagttaataaaagatatctgactccatggagtcatttccagtttcaggtgaacatctaacatggatgatcacatgggaagacggacagttggtggccttctcttcaccaaggggggctcaattcttctcttcagagaagacagtgcgcgtcacaaggccaccaattgctgcacgcgacacggttgcagcagcaagcatttggccggcaaagacaagcaaacacacagggcagcaacagcagccaaggaagcatcagaaacccctcggagatcacagattttcaggaaacccagcacgaggactcctcagggaagtactgctactgataacatcagcaggaatgcagcaagctcctatagcgaaaacgacaataggccaagagaaactccagggcgtgatttaatcgctcgtctcaaagagagggtcaatgcatcaagaaaacgatcattgaacagagaaaacagtccatcatcaccaaatggattaagtgctacttcctcaagtagtagccgcacagtctcaagaccgtcgcatcgggcagcttcccgaataaggaaggcagatgaaggtgcaaatgcaggagctgtaaatgtacgcagagacagcagtggagataccaggaggaattcagatagggatgtcgatgatttcttgctagttgagcaggcagcaagagatagcactgaaggattcatatctggattcttggcaagatacagaagtaatcatcagggactactttcatctttggacgacagcatagaggatgcaaatgggtactggcgcttcaatatggaaggaagtgaagaggtaaagatcattccttttgttgcacatcacagtgtccatccaagggatttgcagaattatgtgcgggcgagctagctttggtacagtgaaaaaactgaattatgtgcaatccattttggtgctcacatagttatattctgtctcgcagcttgagaactacttcatattcaatgatcggtacagagggatgagaatggacattgacggcatgtcttatgaggtatgctagttatgtttccctgaggattctgctactacctgtcattttttcttgacatctctctctcacgcacatttcattctgcagcatctttcatctttcatgacttgttttcacttctcagttcatttgtgatgctctgcactgtaggaattgctagcattgggagatagaattggcaccgtaagcactggcctttcagaagacgcgctgtccaagtgtctagacagaagcatgtacatggccactacttcaggaactcatgaagattgtgagagaaaatgcagcatatgccaggcaagttcatttgcatgagtagattgcgcatgacactgtttgcagagttggattgtactgactactatgtacgaaatctttctgtgtgcattcttcaggaggaatattcagatggtgaggaggtgggcaagatggtctgcaaacattactaccacttctcctgcataaagaactggctccggcagaagaactggtgtcccatttgtaaatccgtcgctctgaataccaactagcactagcagggtgcttcttcagaaaccaaatgtacagattctccatgaatgttctacccagacacaatttgcattctttttttgatactcttttagatcgaaccattcgttcgcatcctccagaccttttgcattattggtctccttcagttcacaatttgcacttgtgcagtacgaacatggaaaggaacaggaaataactcctgaaaaatgaaaaaaaaaatatagttcc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0603200, RefSeq:Os04g0603200