Os04g0604900

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Revision as of 11:26, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0604900| Description = Similar to Xyloglucan endotransglycosylase (Fragment)| Version = NM_001060326.1 GI:115460381 GeneID:4336908| Length ...")
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Gene Name

Os04g0604900

Description

Similar to Xyloglucan endotransglycosylase (Fragment)

Version

NM_001060326.1 GI:115460381 GeneID:4336908

Length

3200 bp

Definition

Oryza sativa Japonica Group Os04g0604900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:30918878..30922077

Sequence Coding Region

30919078..30919534,30921346..30921539,30921695..30922009

Expression

GEO Profiles:Os04g0604900

Genome Context

<gbrowseImage1> name=NC_008397:30918878..30922077 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:30918878..30922077 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgcggccgcttgggcagcagcaggttggcgcggcggcggctctggtgatcgtcgtggcgtgctgcgtcgtcgcggggtgctcgggcgcgcgcgggcgcggtttccgcgaggaattcgacgtgatatggggcgaagaccacgtgagggtcaccgacgaggacgacgcggccacgcggcaggtggtggcgctcaccctcgaccaagcctccggctccgggttccagtccaaggaccagttcctcttcggcgagttcagcatggagatgaagctcgtccccggcgaatcgcccggcacggtcgccaccttctacctgacatcggagggagatgcgcacgacgagatcgacttcgagttcctggggaacgtgagcggcgagccgtacgtgatgcacaccaacgtgttcgcgcaggggagagggaaccgggagcagcagttctacctctggttcgaccccaccgccgacttccacaactacaccatcctctggaaccccctcaacatcatcttctcggtggacggcaaggcggtacgggtgttcaagaaccacgaggccgccggcgtgccgtacccaagcggccaggcgatgagggtgcacgcgagcctgtggaacggcgacttctgggcgacgcgcggcggccaggtgaagatcaactggaccgccgcgccgttcgtcgcgtcgtaccggacctacgcctacagcgcctgcgccgtgccggcggccggcggcggtggcggcggcccgtgcacgtccggccagctaccgaattccacgtcgtcgccgtcgacgtgcgactgcggcggcgcgtggatggacaggcagctcggcgccgacggcgagcgcgacgtggcgtgggcgcgggcgaactacatgatctacgattactgcggcgaccaatggcggttcccgcagggccttccggccgaatgtagcctcgaccagagttccggccatcgcacatag</cdnaseq>

Protein Sequence

<aaseq>MARPLGQQQVGAAAALVIVVACCVVAGCSGARGRGFREEFDVIW GEDHVRVTDEDDAATRQVVALTLDQASGSGFQSKDQFLFGEFSMEMKLVPGESPGTVA TFYLTSEGDAHDEIDFEFLGNVSGEPYVMHTNVFAQGRGNREQQFYLWFDPTADFHNY TILWNPLNIIFSVDGKAVRVFKNHEAAGVPYPSGQAMRVHASLWNGDFWATRGGQVKI NWTAAPFVASYRTYAYSACAVPAAGGGGGGPCTSGQLPNSTSSPSTCDCGGAWMDRQL GADGERDVAWARANYMIYDYCGDQWRFPQGLPAECSLDQSSGHRT</aaseq>

Gene Sequence

<dnaseqindica>2544..3000#539..732#69..383#gtcccactcgtgccaaaacccaagagaagctatatcgagctaactagctagccgcactgtaactaaacatggcgcggccgcttgggcagcagcaggttggcgcggcggcggctctggtgatcgtcgtggcgtgctgcgtcgtcgcggggtgctcgggcgcgcgcgggcgcggtttccgcgaggaattcgacgtgatatggggcgaagaccacgtgagggtcaccgacgaggacgacgcggccacgcggcaggtggtggcgctcaccctcgaccaagcctccggctccgggttccagtccaaggaccagttcctcttcggcgagttcagcatggagatgaagctcgtccccggcgaatcgcccggcacggtcgccaccttctacgtacgtagtaatattatacaattaagccagtaatcatacatacaccacatgcaaattaagtaaagtcacctatatggctatatatcatactacttttagtgcattattacgcatgtgtataatagactatctgtgtgatactgtgatatgtgcagctgacatcggagggagatgcgcacgacgagatcgacttcgagttcctggggaacgtgagcggcgagccgtacgtgatgcacaccaacgtgttcgcgcaggggagagggaaccgggagcagcagttctacctctggttcgaccccaccgccgacttccacaactacaccatcctctggaaccccctcaacatcatgtacgtatgctacgcaacaaacgcactcgtcttacaattaacctcttataatctcgtgtattccgcgctctagctagcttgctggtacagtgtcccagccagatcaagattcaagtcctagtccgtgccaagtgagagagaaattaagttgggtacaacccgtacaagatctttttgtcttcccgtgagctgacttaggttgaaccgtacaagttcacaacttcacgtgtggtcgtgtgctacgtcacggagtcgtggaacgtggcatatactccgtttagttcgggattttttttatttatacattttttattaaaatatttacaaaaataattttttgtttcaaaaatttacaaatcgcctgccgccctttgggatggcgatttttaaaaatcacccttccagagagcggtaagggacctaaatgcaaactttccagcacaacttattagctctatgattttacaatttaaaattatattatataaagtcaaatgaaataaaactttatataaaattgtagagctcaagaagatctacaactttgtagttaacaattttttcatttaagatgttttagatattcaaatattcgttacaaaatataaaacacatttttaaaaatatcatatctacattttaaacgacattggatgaagataaactttatataaaagttgtagatctataactttgtagtctatcacttttctatttaaaatcatttgaagtatcgattagatttgtataaataaaaaaaattcgttcggttgggagcctagccaatgggccatgagcccatgaccgaatactcggatttatcagcccctatcccatacttgtaatgggccgggtgctcaggcatgtcctttgaaaatgtcctaaacttcacatgagaaatttgcatttctgcatcagaaatatttatcactgtcggtttggtactttgttgccacgaaaacgtcgttttgtaggacttgtacacaagcacttagagcaagtttaatagtagagttcaatgccaattgttagtttattttaaagccaacacatatagtaatagattagctataataatgtcttaaatttatcttctcctcttatagtaatagattagctataataatgtcttaaatttatcttctcctcttattttctctcacttatagatttgatgtatttgttttggaacacgtgttaagctagtttttgcatgagagctaacacccctcacgtttagttacttttttcctccacataaatttatagtagtcttataagtcactattatccttactcttaagcaattaagcacataatactgagtagataactagaaatacattatttttctcgagattacagctaaatcattctaacgccgtgttcaatagctgcatgcctgaacggctgcactcactcatttcaaagtaggccacatgagtatagtttgtttattaaaaagagagagagagaaggaaaccgtgcagaagcacatgagaagcctgctcaggtaacacgtcaaactcagcctgacaaaaaaaaaaaaggtatttgtcaaagagaggagaaatttatatatggcaagtcaaatactagattccggcgaaaaatgatttaaacatctgaatcaaatcttaacagttttaataatcatatccaaatcaagccacttgactggctggcccatccatgcacgaatctgatcgatcgaccactgcctggagcttgagttaatgcactagatctcctgtgcatagctgcatgcctgcatttgcatcattgtatgatgtatatgatgtatgtttcagcttctcggtggacggcaaggcggtacgggtgttcaagaaccacgaggccgccggcgtgccgtacccaagcggccaggcgatgagggtgcacgcgagcctgtggaacggcgacttctgggcgacgcgcggcggccaggtgaagatcaactggaccgccgcgccgttcgtcgcgtcgtaccggacctacgcctacagcgcctgcgccgtgccggcggccggcggcggtggcggcggcccgtgcacgtccggccagctaccgaattccacgtcgtcgccgtcgacgtgcgactgcggcggcgcgtggatggacaggcagctcggcgccgacggcgagcgcgacgtggcgtgggcgcgggcgaactacatgatctacgattactgcggcgaccaatggcggttcccgcagggccttccggccgaatgtagcctcgaccagagttccggccatcgcacatagccggagccggccattgcctccgtgctgttctagcattcatgatactgtaacttgatctctactgtacttcacaatgtcacatgatcgtaaatctcctcaaattcatatggcacatggtacatgacaccaagaacaataataagcggattaacgaagtcccaacatatataaccatggaataaaaatgggttggctgtttt</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0604900, RefSeq:Os04g0604900