Os04g0610500

From RiceWiki
Revision as of 11:27, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0610500| Description = Peptidase M24A, methionine aminopeptidase, subfamily 1 protein| Version = NM_001060365.1 GI:115460459 GeneID:4336948|...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os04g0610500

Description

Peptidase M24A, methionine aminopeptidase, subfamily 1 protein

Version

NM_001060365.1 GI:115460459 GeneID:4336948

Length

3461 bp

Definition

Oryza sativa Japonica Group Os04g0610500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:31343753..31347213

Sequence Coding Region

31343951..31344096,31344207..31344254,31344386..31344483,31344981..31345060,31345302..31345373
,31345477..31345518,31345626..31345787,31345893..31346130,31346271..31346343
,31347048..31347111

Expression

GEO Profiles:Os04g0610500

Genome Context

<gbrowseImage1> name=NC_008397:31343753..31347213 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:31343753..31347213 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggtgagagtcccttccatggagctgcaccgccccccgccgtccgtatccggtgtccgaggaaaaagctgccttcaaaagcctttccttgtccaagcaaagagattagagggattggagaaggcaaacccaaggtcacgaggaaagcaaagtttggaacaagtgaagaaaagagcaccactgatccgtgggacagtgagtccacctctaccagtaccaggtcacataactcaacctccttacgttggtaaaaaggatgcttcagagatagcaagtgagatacaaatgcatgacaaagtgagcattattcacatgaaagctgcatgtgagcttgctgctcgtgttcttgaatacgctggaactttagtgaaaccctctgtaacaacagacgaaattgataaagcagtgcacaagatgatcattgatgctggagcctatccatcccctctcggatacggagggtttccaaaaagcgtgtgcacatctgtgaatgaatgcatctgccatggaattcctgattctcgtgaacttcaggatggagacataattaatatcgacgtcactgtctacctgaatggctatcatggggacacctcaaagactttcctatgtggagaagtggatgaagccagtaaacgacttgtgaaggttactgaagagtgcatgctcagggctatatcagcttgcaaacatggtaccagcttgaagaaaattggcagaagaataagcgagcatgctgagaggcacggatttggtgttgtggatcgttttgttgggcatggagttgggagaatatttcattcagaaccaatgatatatcaccagcgtaataatatgccaggtcaaatggttgaaggccagacattcacaatagaaccggccctatccatgggaagcattgattgcgacatgtgggacgacggctggacggccgtcacgacggacggcagcctagccgcgcagttcgagcacacgatactgattaccaagacaggagcagaaatcctcacgaaatgctag</cdnaseq>

Protein Sequence

<aaseq>MAVRVPSMELHRPPPSVSGVRGKSCLQKPFLVQAKRLEGLEKAN PRSRGKQSLEQVKKRAPLIRGTVSPPLPVPGHITQPPYVGKKDASEIASEIQMHDKVS IIHMKAACELAARVLEYAGTLVKPSVTTDEIDKAVHKMIIDAGAYPSPLGYGGFPKSV CTSVNECICHGIPDSRELQDGDIINIDVTVYLNGYHGDTSKTFLCGEVDEASKRLVKV TEECMLRAISACKHGTSLKKIGRRISEHAERHGFGVVDRFVGHGVGRIFHSEPMIYHQ RNNMPGQMVEGQTFTIEPALSMGSIDCDMWDDGWTAVTTDGSLAAQFEHTILITKTGA EILTKC</aaseq>

Gene Sequence

<dnaseqindica>3118..3263#2960..3007#2731..2828#2154..2233#1841..1912#1696..1737#1427..1588#1084..1321#871..943#103..166#gggggaaaaaaatctgcagccttcccgtgttatcctcttcaacctctggccctctcactcctcgcgccgcgcggctgctccggccaccaaagtggcgctccgatggcggtgagagtcccttccatggagctgcaccgccccccgccgtccgtatccggtgtccgaggtatctattcatgattcatcactcccaatatgatggcgatatcgtcggattttggcatcgccgaaggttggctggatgggtggggggttcatgaaacttctataaactttatctcgctcagccgcgtgtgattttaggctgctgttgttgcggcgagcgtctcgctgtgcgaggtgacaaactgacaactttgggtttaatatcaggatattctaagtgctagattttggtttagtcaggggctttaatcagtcactagtgttgctggaacaatgctgtgaaggatggagaaggtttttttttctctctctctctcttactgctgaaaggcagaaacgatgctacgaatcaggaataatccgaggagtagataaagaaagttatgttttccgttactagagtctgaactctgaacaatgctatgagcaattggtagtgctaatggaatgggtataggagactgagtggttcagtgtgcataatcaataatatgatcaaactaataatgcagttaagtgacagaaagaacatctcgtaactcaaaatcaatgattcttcttataggtagcatttgcatatctgcatctgcaacgatattatggaagtatgttcagtaatacattatttctttctattactcaaacaaagtttgttttttgggaaacgacaaacaaagttatgtttgatgtcttctaatttttaaggaaaaagctgccttcaaaagcctttccttgtccaagcaaagagattagagggattggagaaggcaaacccaaggtataaaatccacctatataagtcgagtctttaccttctataagaaatgtggttcagtggctgataacctagaacatattagtgccactgcaccttcatgatcttcttcatacagttctaacacttgcaaaaactcaaaggtcacgaggaaagcaaagtttggaacaagtgaagaaaagagcaccactgatccgtgggacagtgagtccacctctaccagtaccaggtcacataactcaacctccttacgttggtaaaaaggatgcttcagagatagcaagtgagatacaaatgcatgacaaagtgagcattattcacatgaaagctgcatgtgagcttgctgctcgtgttcttgaatacgctggaactttagtgaaagtaagcttgcatttcagcatttcgacaatttatgtttctcttgaagctaattattccatgataaattatagcttcagtaagaaatttattgcatccttttatcagccctctgtaacaacagacgaaattgataaagcagtgcacaagatgatcattgatgctggagcctatccatcccctctcggatacggagggtttccaaaaagcgtgtgcacatctgtgaatgaatgcatctgccatggaattcctgattctcgtgaacttcaggttctgggagaagcctacatagtcatttttttccctcatgttcaggcttatcaccccccttgctccactgacgatgtcattatcatttctttttttctgttttgcaggatggagacataattaatatcgacgtcactgtctacctgaatgtatgtctactctcttttttattagttgttacttcataccattgatgtgttttcacgccttcattcgtatcatcatctgaagtaatatatctttccatttcagggctatcatggggacacctcaaagactttcctatgtggagaagtggatgaagccagtaaacgacttgtgaaggtatatatctttgtctttgcaaacatgtagttcatgttattagaagtcatgattatagtaggcctcaccaaagtgagaagtcatttgtgttcatttttccttaccttgtgagattttgcttacgtctcagtttgcatttgatcatataaccagagctaatatctacttttgatggcaacttttccttcaaaaccatctgtctactaatttgaatcggggaccctaatgacggtaatgtcaggttactgaagagtgcatgctcagggctatatcagcttgcaaacatggtaccagcttgaagaaaattggcagaagaataaggtataaaaatctcataccatatttgtgtcatggccagcagggcaaggatagttgcatccataatccaatggagaatggacttttaccatatgtgctattctagacttctgtttttctttgcagaacttttcaaccttatactgtatttactagttaagttgcaccaaatggtatctctctcaggtatttgaacccaaaaattgaagaagtgtttttgtcaagtacaaacagaatcatcattgcctctatcttcagaatccataggttattatgtcttcgtaagaacttgtattataatgcattcaactaccaaacattctcagcctgttattggttacccatcggttgtgttttagttaatgaataaatatgcaattgactaagtcaactgtaacggtatataaccaggaactcttactgcaactttgtcaaactttgattgatttcaaatacatctcaaatggttcttgctcattagtttgcttttaacatgtcagcgagcatgctgagaggcacggatttggtgttgtggatcgttttgttgggcatggagttgggagaatatttcattcagaaccaatgatatatcaccagcgtaagtgattgttaccaatcaagagctagtgcatttctgcatgccaatgttaccaatgcatcttctcttctcattgcatacaaataactccaagaattgttagatctgacggctttttttctctgagacaggtaataatatgccaggtcaaatggttgaaggccagacattcacaataggtacgcaacaccctgatggttcttctaatctgacacaaccgggttcggttttactcccaaaacaatgcctctgatcctgactgccagtggctcttactcttttcgtccagaaccggccctatccatgggaagcattgattgcgacatgtgggacgacggctggacggccgtcacgacggacggcagcctagccgcgcagttcgagcacacgatactgattaccaagacaggagcagaaatcctcacgaaatgctagtaagatcggtgcccagcattagccactggagtagcagtgatctctgtgtttgtaggacgagtatggtggaaaggatggtcgattgttttgctgtataaagtactccctctgtattttaattttgattttaatgtattatgccgttgactttttaaccaacgtttgaccacttgtcttattcaaaatttgtatgcaaat</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0610500, RefSeq:Os04g0610500