Os04g0613000

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Revision as of 11:27, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0613000| Description = Similar to Zinc transporter ZIP1 (Fragment)| Version = NM_001060386.1 GI:115460501 GeneID:4336971| Length = 2358 bp|...")
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Gene Name

Os04g0613000

Description

Similar to Zinc transporter ZIP1 (Fragment)

Version

NM_001060386.1 GI:115460501 GeneID:4336971

Length

2358 bp

Definition

Oryza sativa Japonica Group Os04g0613000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:31476736..31479093

Sequence Coding Region

31476936..31477241,31477749..31477898,31478231..31478869

Expression

GEO Profiles:Os04g0613000

Genome Context

<gbrowseImage1> name=NC_008397:31476736..31479093 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:31476736..31479093 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggagccaagaagcataccttgcaagtgcttccatggctactgctctttgcgcagcacactgcagccagtgcctgcgactgtgctaacaccacagacggggcagacagacagggtgcaatgaagctaaagctcattgccattgcatccatccttgcagctggggcggctggtgtcttggtgccagtgattggccgctccatggctgcgctgcgccctgatggtgacatcttctttgctgtcaaggcatttgcagccggcgtcatccttgccactggcatggtgcacattcttccagcggcgtttgatgcgctcacatctccatgcctcaaaaggggtggtggggataggaatcccttcccctttgcgggccttgtttcaatgtctgctgcagtgtccacaatggtggtggactcattggctgctggatactatcaccggtctcaattcaggaaggcacgcccagttgacaacatcaacgtacacaagcatgctggagacgagagggctgaacatgcacaacacataaatgcgcacacacatggaggacatacacattcacatggtgatatagtggtctgtggctcaccagaggagggttcagtagctgaatcaattcgacataaggtagtatctcaggttcttgagctgggaatcttggtgcattcagttatcattggagtatccttaggtgcatctgtgaggccatctactatcaggccactagttggtgccctcagcttccaccagttctttgaaggtgtaggtttgggtggttgcattgttcaggctaattttaaggtaagggcaaccgtcattatggcaatatttttctccctgactgcacctgtgggcatcgtgctaggaattgcaatttcatcgagctacaatgtgcatagctcaactgccttcgtcgttgaaggagtcttcaactcagcctcagcaggaattttgatctacatgtccctagttgaccttctagcaacagatttcaataacccgaagctacagattaatacaaagcttcagctcatggcataccttgcacttttcctaggtgctggactgatgtcaatgcttgccatatgggcatag</cdnaseq>

Protein Sequence

<aaseq>MGAKKHTLQVLPWLLLFAQHTAASACDCANTTDGADRQGAMKLK LIAIASILAAGAAGVLVPVIGRSMAALRPDGDIFFAVKAFAAGVILATGMVHILPAAF DALTSPCLKRGGGDRNPFPFAGLVSMSAAVSTMVVDSLAAGYYHRSQFRKARPVDNIN VHKHAGDERAEHAQHINAHTHGGHTHSHGDIVVCGSPEEGSVAESIRHKVVSQVLELG ILVHSVIIGVSLGASVRPSTIRPLVGALSFHQFFEGVGLGGCIVQANFKVRATVIMAI FFSLTAPVGIVLGIAISSSYNVHSSTAFVVEGVFNSASAGILIYMSLVDLLATDFNNP KLQINTKLQLMAYLALFLGAGLMSMLAIWA</aaseq>

Gene Sequence

<dnaseqindica>1853..2158#1196..1345#225..863#ggccaaagaatgacatctcttctcatcatcttattcccttctacttaaataaaaaaagaagaagaaaaaacccatcattgcctccatcttctggtcaaaggatgacatcaatccctatcatctcatcccctcctatataaagaacccagtactaccttcatctctgactcatagcaatatacatacatcgtatcacagggaaataatcaacataatcagcaacaatgggagccaagaagcataccttgcaagtgcttccatggctactgctctttgcgcagcacactgcagccagtgcctgcgactgtgctaacaccacagacggggcagacagacagggtgcaatgaagctaaagctcattgccattgcatccatccttgcagctggggcggctggtgtcttggtgccagtgattggccgctccatggctgcgctgcgccctgatggtgacatcttctttgctgtcaaggcatttgcagccggcgtcatccttgccactggcatggtgcacattcttccagcggcgtttgatgcgctcacatctccatgcctcaaaaggggtggtggggataggaatcccttcccctttgcgggccttgtttcaatgtctgctgcagtgtccacaatggtggtggactcattggctgctggatactatcaccggtctcaattcaggaaggcacgcccagttgacaacatcaacgtacacaagcatgctggagacgagagggctgaacatgcacaacacataaatgcgcacacacatggaggacatacacattcacatggtgatatagtggtctgtggctcaccagaggagggttcagtagctgaatcaattcgacataaggtagtatctcaggtaacagcagtcacttgaagctcataggccttcctggcaacagtaatgagaataagtttagtctattgtaatcttgaaactacaatagtgcaggatgatgttgattatctaatatctctttttacttatttccataaaacacatagaaaacatatatggggaagagaagatacctattcaatggatatgtctgataatctgcacttcaggggaaacttttcccactaaactcagaattaactccatttgcacattgattgccaactaaatgaatgcttcacaaaaccagataggccctcttgcaataaccacatgaatttttggccatgcaggttcttgagctgggaatcttggtgcattcagttatcattggagtatccttaggtgcatctgtgaggccatctactatcaggccactagttggtgccctcagcttccaccagttctttgaaggtgtaggtttgggtggttgcattgttcaggtatgtccaagtactgtaacctagatagtagacacctgatgacaaatatctaacttgttgtttcgacttttgacaaaagatagcaaaatgcttgctcgaaaaggcttaacatcaacatgctcgtaggccagtggaagggcccttccgcagaaggggagagaaaaaaagaaataaggcagagacatacaaagttggaaaaaaaaaggcacaatagcaacaagacacattgcaagcatgaaaagttattagccattttcttcaagaacgaagtaacagaccacaaaaaaaagaagccgagaacaaagtaacaggctgcaaaagaaaaataaagaaatataactgtttcatatagagaacataggttcactagttaggtaagaataataatagatttatcgagaaatcaaataattggacacaaagaagaaagagacaactatgcatataacatatcatgtcttacagcaacaaaaagctaatatgtttgattcattcttcttactgcaggctaattttaaggtaagggcaaccgtcattatggcaatatttttctccctgactgcacctgtgggcatcgtgctaggaattgcaatttcatcgagctacaatgtgcatagctcaactgccttcgtcgttgaaggagtcttcaactcagcctcagcaggaattttgatctacatgtccctagttgaccttctagcaacagatttcaataacccgaagctacagattaatacaaagcttcagctcatggcataccttgcacttttcctaggtgctggactgatgtcaatgcttgccatatgggcatagatcttcagaataacagaggatcttatttcccagataggcttgatttgtattaatctatgagttttctatcttcgcaaaataacatactcttggtggagtatttattgtatccatcctagattttctaaaaccaaagcttatctcaggtgatctctttgtactttatgatatgataatacatgatgacttaacttgttctt</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0613000, RefSeq:Os04g0613000