Os04g0616000

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Revision as of 11:28, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0616000| Description = Conserved hypothetical protein| Version = NM_001060409.1 GI:115460547 GeneID:4336994| Length = 3092 bp| Definition ...")
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Gene Name

Os04g0616000

Description

Conserved hypothetical protein

Version

NM_001060409.1 GI:115460547 GeneID:4336994

Length

3092 bp

Definition

Oryza sativa Japonica Group Os04g0616000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:31653379..31656470

Sequence Coding Region

31653982..31654074,31654176..31654254,31654333..31654375,31654463..31654654,31654747..31654815
,31654919..31654994,31655099..31655152,31655891..31655959,31656054..31656317

Expression

GEO Profiles:Os04g0616000

Genome Context

<gbrowseImage1> name=NC_008397:31653379..31656470 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:31653379..31656470 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggaggcacgaggcggcggccggggtggtggacttccacctgcccgacgagatcctggctgtgatccccaccgacccgtacgagcagctggacgtggcgcggaagatcacctccatggccatcgcctcccgcgtctcccgcctcgaggccgacgcggcgcgcctccgccgcgacctcgccgaccgggaccgcgccgaggccgacctccgcgcccgcctcgcggactccgacgcccgcctcctcgccgccctcgacgagaacgcgaagctggcgaaggagagggactcgctcgcctccacggccaagaagatggcgaggaacttggcgaagttggaagcatttaagaagcagttgatgaagtcactgagtgaagacaatttattacaattgtcagaaataggtgatgaccgtgattttgatgcaaacaacaatttgactgctcgagttccctcttggaaagatgaagtttcaagtagtcgcacttctgcagatagttccagcagatccacaatgactgaatcagcccaagaacatcagttctcagtcacaccatacacagctcctaaattaactcctggttcaacacctaagttcttatctggtccaacatcacctacaaaatctctgtcagaagtccactcaacattttcatcatggcatggatcgtcaagccatcagtattcagcacccacctcccctcctcagcatcgttcgttcgcagggcggccccgtatagacggaaaggaatttttccggcaagcacggacacgactttcgtatgagcaatttggggcatttttagctaacatcaaggagttcaatgctcagaaacaatcacgagaggacactctctcaaaggcagaagagatttttggaacagaacataaagatttgtacatttctttccagaatatgcttaaccgcaaccattcttga</cdnaseq>

Protein Sequence

<aaseq>MGRHEAAAGVVDFHLPDEILAVIPTDPYEQLDVARKITSMAIAS RVSRLEADAARLRRDLADRDRAEADLRARLADSDARLLAALDENAKLAKERDSLASTA KKMARNLAKLEAFKKQLMKSLSEDNLLQLSEIGDDRDFDANNNLTARVPSWKDEVSSS RTSADSSSRSTMTESAQEHQFSVTPYTAPKLTPGSTPKFLSGPTSPTKSLSEVHSTFS SWHGSSSHQYSAPTSPPQHRSFAGRPRIDGKEFFRQARTRLSYEQFGAFLANIKEFNA QKQSREDTLSKAEEIFGTEHKDLYISFQNMLNRNHS</aaseq>

Gene Sequence

<dnaseqindica>2397..2489#2217..2295#2096..2138#1817..2008#1656..1724#1477..1552#1319..1372#512..580#154..417#aaaaagaattaaaaatcagaaaaaaaaaactttaatttccagtcttgctctgcgccgccgccggcgaccaccgcagcaacctccgccgccgccgccgccgtccaggaactgaccggccgagctgctccgtctcgtggggcgcgcgtggcggcgatggggaggcacgaggcggcggccggggtggtggacttccacctgcccgacgagatcctggctgtgatccccaccgacccgtacgagcagctggacgtggcgcggaagatcacctccatggccatcgcctcccgcgtctcccgcctcgaggccgacgcggcgcgcctccgccgcgacctcgccgaccgggaccgcgccgaggccgacctccgcgcccgcctcgcggactccgacgcccgcctcctcgccgccctcgacgagaacgtgagcccctgggacctcgcgtcgctgggatgctttcggcagcagaattgggatgcgtactcagtttggtttgtgttcgattcgtggtgtgcaggcgaagctggcgaaggagagggactcgctcgcctccacggccaagaagatggcgaggaacttggcgaaggtgactcaattatcccaattttagtgagaattctgtgatttctcaacatggtgttcggtttcaagtttcaattgctgcttatactagggagctagtgggtttttatccgtgctctgattgatagctcgcctgtttatttcgtgcaaaacttgctggaatcatgtctcaacccatgtactttcagtgttagtttgctagcttgctagatatgtgattttcttgcaggtgttcctagaatcatagtagtaggcagtttgcataggttggtcaaccgtgtaccgaagttttatgggatcagatggaatatcttttaattgttagttgtagattaatagtgagtcaggaattttgttcaaatgtataatctttggtgtgcattacaatggaatagcagaatgacttggtgttaaagagtccacaattatgaaaaaagaagtttctagaaggtcacccttttttgccagatattatacttcaaaagaaacaagaacaggatcaacgactaactaatgctttgttgtcactgactcactgtggtgtggaagctataactgctaagtttacccaccctttgtggctttcaaattattctcgaattcttgccctaaatggtcatatttgttggtatgattttgtcagaatgctaatcgacatgaagtttgtcaagtttttttttatcagcattaaaaaatttgtatgttagttggctgcttgttgaagatcactctttctatgcagttggaagcatttaagaagcagttgatgaagtcactgagtgaagacaatttattagtgagtattacttatgaaaatgcttctatatgttgaatatttcatgctgtgcttttctgaagttgctcatgtgcgtaaataattttatttgcataatcttgcagcaattgtcagaaataggtgatgaccgtgattttgatgcaaacaacaatttgactgctcgagttccctcttggaaaggtattgttcaacctcatcggaaatcctataatattgtcttttcttcaagtaatagccagaattgcatgcatcttccttggtttcactattttttacttggcagatgaagtttcaagtagtcgcacttctgcagatagttccagcagatccacaatgactgaatcagcccaaggtggttataataacttactcttatcgaacacctgaatattatcaacttatcacatcttatatcagcatatacttgctatgaaacatttacagaacatcagttctcagtcacaccatacacagctcctaaattaactcctggttcaacacctaagttcttatctggtccaacatcacctacaaaatctctgtcagaagtccactcaacattttcatcatggcatggatcgtcaagccatcagtattcagcacccacctcccctcctcagcatcgttcgttcgcaggtttgggagttgttgaatcttattttcatttggggagatttgttgaacatgcatatgctgataatacaaaatcttttatgtttccagggcggccccgtatagacggaaaggaatttttccggcaagcacggttggttattatgctgttcaccttatgtgaaaattaatatttcgattccatcctaacacttctggacacaaatcccaggacacgactttcgtatgagcaatttggggcatttttagctaacatcaaggagttcaatgctcagaaacaatcacgagaggtagcatattgcccgtttataattgttgacttttcagttggttattttctgcgaaaatatgtaaacatgattttcttgttgtacttgatgaatttgcgcaggacactctctcaaaggcagaagagatttttggaacagaacataaagatttgtacatttctttccagaatatgcttaaccgcaaccattcttgaatgcttgtcacaggcttcagtctatttttgtctcttaaacaagcaggttgttttactcccgaattctgatttctctgttaaggcggcatttcatgttctgatggactaacaatgtctatttcacgccacttattttcaggaagtatgtaactgttggaagataatcgttgttctttcatagacgtaaacaacaaattgccagagatttgtaaatagatcattataatttaagctggccatcctcaatatcactatgtaaatggacccagtcatgcatcccaaaacagggatctgggaactgaaatattacacctatggcaaattttggtctgtgtaattaagcatacatgcacattccattgtagcacttcctgtgttcctgcggatttcttgaggtgtcctccatgcagaaagttgtataatactcaaaaactgctcttttgtatctgtgttaacaagtactaaactgctcttttttgacacggtgtattgccttaatccgtgtcaaaaaaacatgtattgccttaaaagagttcaggcaatgatagtatgtattgcttgttctccttgtctgatgaacaaagtaattgctagaattgcact</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0616000, RefSeq:Os04g0616000