Os04g0624000

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Revision as of 11:29, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0624000| Description = Similar to Symbiosis-related like protein| Version = NM_001060464.1 GI:115460657 GeneID:4337052| Length = 2754 bp| ...")
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Gene Name

Os04g0624000

Description

Similar to Symbiosis-related like protein

Version

NM_001060464.1 GI:115460657 GeneID:4337052

Length

2754 bp

Definition

Oryza sativa Japonica Group Os04g0624000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:32114938..32117691

Sequence Coding Region

32115112..32115206,32115352..32115470,32116044..32116096,32116186..32116241,32117309..32117345

Expression

GEO Profiles:Os04g0624000

Genome Context

<gbrowseImage1> name=NC_008397:32114938..32117691 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:32114938..32117691 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccaagagctcgttcaagctggaccacacgctcgagaggaggcaggctgaggctaaccgtatcagagaaaagtacagtgacagaattcctgtgattgttgagaaagctgaaagaagtgatattcctgacatcgacaagaaaaagtacctggtccctgctgatcttaccgttgggcagtttgtctatgttgttcggaagcggatcaagctcagtcctgagaaagcaatcttcatctttgtgaagaatactcttccaccaacagctgctctgatgtccgcaatttacgaggagaacaaggatgaggatgggttcctctacatgacctacagtggcgagaacacctttgggctgctctag</cdnaseq>

Protein Sequence

<aaseq>MAKSSFKLDHTLERRQAEANRIREKYSDRIPVIVEKAERSDIPD IDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNTLPPTAALMSAIYEENKDE DGFLYMTYSGENTFGLL</aaseq>

Gene Sequence

<dnaseqindica>2486..2580#2222..2340#1596..1648#1451..1506#347..383#cccaccacccgtctccgcaacccacacatctccattgcgccaaggaagaagaaaccctccccctccctctccccaatccaatccaatccaatccggcgagtcgcgtgagtttccgctcccctcttccgtcgattcggcatcgggttcgccgatcaggggggcttccttgtccgatttggtggttgattcgtgtttttgctcgtgttctccaggaccagctcagtctctcgtaagggtttgatcgagttgttgtgtttcgttgcgcgattggcttcgatcggtgtgtttctggtggttaattttttggggggcgctgatttggtgattgtgtgcaggaaggagcgccatggccaagagctcgttcaagctggaccacacgctcggtcggtttgttttcttatcgtgttcctctttttattttttcctatatgtgctttagtagtgtggctgcgatgattgcgtgttgggtttatttgttcgataattgattgaatgtgtgcgaagacgagagaaagagacacaggaatatgttttttcccccggtttaaggggatggcttaccaaaacatctgaatgtgtgtggtagcaactgtttattgaattgtgcatgttctgtgcgaatctgggagtaggagtaggttgcgattgctacaaagttgtgtgactgatttgaatttggtagtaataatagtagtacatgccttttcataatgggaatagtaggttctgtgcggatggatagagggatggttaatggggaaaatatgtcatcattactgatgaatcaaattataaagagcctcaatgtgtctatctgaatttctgatacaccagttttaactattatgtaaggctgtaaaacccaatatctctagtattgtagactataaattaacagttgacctgacaatccagcatcattagctgattctttgatttgtttttaagacttatgtggtcttgttccttttctgatggatcgtataaggaatagactttccaattcaatcacccaacactttatgcttgagaacatggttttggtagtctattgcatgtttaggggttgctgtaaatcctgcccaatcttctgtgaaagggccctgatgtttagtatcatgctttttttcactgagttatttcttcctgtctaattttttatcttttaccttttgtgcttgaacaatatttaagttgattaatgtgtgtgccaacatgatagcatagattccttttttgagaaatagacagcataagtattgcacttttttggttgccctttcttgtaatcactctgttattatagttttctctacagtgatttgaaatctctgatttctcgttctccatcttctacaaccttgatttatgtatacattttagagatgtttcagccttttagtcagttcataataaccaaaatcttgttcttcttgtgcatgtatttcagagaggaggcaggctgaggctaaccgtatcagagaaaagtacagtgacagaattcctgtaagcttgctcttcatattgctcagttatgttgtttccttcattgtggtttttttgctctaatttgttacatatctaatgtaatgtaggtgattgttgagaaagctgaaagaagtgatattcctgacatcgacaagaaaaagtcagtttccaagcatttacgaaaccatagcatttagatttttatttagttagtctattgaaccgctaaaggaaggaatattgtctttaattgctatcaagtaaatgctagtggaggacttcaggtgttcagatgatagcaactagtagctcttgccattcatttatccttatctaggactgcattgatgcaatggtattgcttgtgggtcctttgggggcatatttcattttattataattgtttcaaggacttaaagtcatgattaacggtgtcctataaacttttttggtactagcagtacagcatcattacagtacttgcatcacattaaatcctttatgctctttttagttaaacatgtagtagtatttactatttatcactgtaaagtcctaactctatgttccaaaagcagctgactgtgtttcaatttattattgcaaggatgccggtatggctatggcattcaagctcgaaacttttgttgctctgaaactttaatacatgttacatcaagtatcaatcaatattaccgtatcatccttagtagcttatgattttctaatataggtacctggtccctgctgatcttaccgttgggcagtttgtctatgttgttcggaagcggatcaagctcagtcctgagaaagcaatcttcatctttgtgaagaatactcttccaccaacaggtctgaaaatcccttgaatcattttcctttgaaaacacaaggactttggtcgaatagtatactactgcatggtttatgatcccagtatctcaaagaacctgcatggttcatgttatctcatttcatcactttgttggatttgcagctgctctgatgtccgcaatttacgaggagaacaaggatgaggatgggttcctctacatgacctacagtggcgagaacacctttgggctgctctaggcgcggcagcaatatcgctctcaactcctgtaaataagacttgccaaacaagtgtatattctttgcttacctcgtggcaaatctttaaactctaatagtagtaatgccaagatcctctcagttgttctgaacatatatacgctgcttgataatactcccaagtaattgtggctc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0624000, RefSeq:Os04g0624000