Os04g0627000
| Gene Name |
Os04g0627000 |
|---|---|
| Description |
Similar to Roc1 |
| Version |
NM_001060486.1 GI:115460701 GeneID:4337074 |
| Length |
6530 bp |
| Definition |
Oryza sativa Japonica Group Os04g0627000, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 4:32298823..32305352 |
| Sequence Coding Region |
32299364..32299744,32299849..32299944,32300313..32300584,32300722..32300896,32301012..32301212 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008397:32298823..32305352 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008397:32298823..32305352 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgatgatcccggcgaggcatatgccgtcgatgatcggccggaacggcgcagcgtacggatcctcatcggcactgtcactcagccagccaaacttgctggataatcaccagttccagcaagcgttccagcatcagcagcagcagcatcatctccttgaccagatcccggcgacgacggcggagagcggcgacaacatgatccgcagccgtgcgtccgaccctctcggcggcgacgagttcgagagcaagtccggcagcgagaacgtcgacggcgtctccgtcgacgaccaggaccccaaccagcggccgcgcaagaagcgctaccaccgccacacccagcatcagatccaggagatggaagcattcttcaaggaatgtccacacccagatgataagcagcgcaaggagctgagccgggagctcggcctggagcctctccaagtgaagttctggttccagaacaagcgcacccaaatgaagaaccagcatgagaggcacgagaactcgcagctgcggtcggataacgagaagctccgggccgagaacatgcggtacaaggaggccctgagcagcgcctcctgccccaattgcggcggccccgccgccctcggcgagatgtccttcgacgagcaccacctccgcatcgagaacgcccgcctccgcgaagagatcgataggatatcggcgatcgcggcgaagtacgtggggaagccaatggtgccgttcccggtgctgtcgaacccgatggcggcggcggcgtcgcgggcgccgctggacctccccgtggcgccgtacggcgtgccgggcgacatgttcggcggcggtggcgccggggagctgctgcgcggggtgcagtcggaggtcgacaagccgatgatcgtggagctcgccgtggcggcgatggaggagctggtccgcatggcgcagctggacgagccgctctggagcgtcgcgccgccgctcgacgccacggcggcggcgatggagacgctcagcgaggaggagtacgcgcgcatgttcccccgagggctcggccccaagcagtacgggctcaggtcggaggcgtcccgcgacagcgccgtcgtcatcatgacgcacgccaacctcgtcgagatcctcatggacgcgaatcagtacgcggcagtgttctcgaacatcgtgtcgagggccatcacgctggaggtgctgtccaccggcgtcgcggggaactacaacggtgcattgcaagtgatgtcagtggagtttcaggtgccatcgccactggtgccaacgagagagagctacttcgtgagatactgcaagcagaacgcagacgggacatgggccgtcgtcgacgtctcgctggacagcctccgccctagccccgtcctcaaatgtcgccgccgtccgtcaggctgcctcatccaagaaatgcccaatggctactccaaggtgacgtgggtggagcatgtggaggtggacgacaggtcggtgcacaacatctacaagctgctggtgaactccgggctggcgttcggcgcgcggcggtgggtcggcacgctggaccgccagtgcgagcgcctcgccagcgtcatggccagcaacatccccaccagcgacatcggcgtgattacgagctcggaggggaggaagagcatgctgaagctggcggagaggatggtggtgagcttctgcggcggcgtgacggcgtcggtggcgcatcagtggacgacgctgtccggcagcggcgccgaggacgtccgcgtcatgacgaggaagagcgtcgacgaccccgggaggccccccggcatcgtcctcaacgccgccacctccttctggctccccgtccctcccaagcgcgtcttcgacttcctccgcgacgaatcctctcgcagtgagtgggacatcctctccaatggcggtatcgttcaagaaatggcccacatcgccaatggccgggatcagggcaactgcgtctcacttcttcgcgtcaacagctcgaactcgaaccagagcaacatgctgatcctgcaggagagctgcacggacgcgtcggggtcgtacgtcatctacgcgccggtggacgtggttgcgatgaacgtcgtgctaaacggcggcgacccggactacgtcgcgctgctgccatcgggcttcgccatcctgcccgatgggccggcgcacgacggtggcgacggcgacggcggcgtcggcgtcggctccggcgggtcgctgctgacggtggcgttccagatactggtggactccgtcccgacggcgaagctctcgctggggtcggtggcgacggtgaacagcctcatcgcctgcacggtggagcgcatcaaggcggccgtctccggcgagagcaatccgcagtag</cdnaseq> |
| Protein Sequence |
<aaseq>MMIPARHMPSMIGRNGAAYGSSSALSLSQPNLLDNHQFQQAFQH QQQQHHLLDQIPATTAESGDNMIRSRASDPLGGDEFESKSGSENVDGVSVDDQDPNQR PRKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK NQHERHENSQLRSDNEKLRAENMRYKEALSSASCPNCGGPAALGEMSFDEHHLRIENA RLREEIDRISAIAAKYVGKPMVPFPVLSNPMAAAASRAPLDLPVAPYGVPGDMFGGGG AGELLRGVQSEVDKPMIVELAVAAMEELVRMAQLDEPLWSVAPPLDATAAAMETLSEE EYARMFPRGLGPKQYGLRSEASRDSAVVIMTHANLVEILMDANQYAAVFSNIVSRAIT LEVLSTGVAGNYNGALQVMSVEFQVPSPLVPTRESYFVRYCKQNADGTWAVVDVSLDS LRPSPVLKCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRSVHNIYKLLVNSGLAFGAR RWVGTLDRQCERLASVMASNIPTSDIGVITSSEGRKSMLKLAERMVVSFCGGVTASVA HQWTTLSGSGAEDVRVMTRKSVDDPGRPPGIVLNAATSFWLPVPPKRVFDFLRDESSR SEWDILSNGGIVQEMAHIANGRDQGNCVSLLRVNSSNSNQSNMLILQESCTDASGSYV IYAPVDVVAMNVVLNGGDPDYVALLPSGFAILPDGPAHDGGDGDGGVGVGSGGSLLTV AFQILVDSVPTAKLSLGSVATVNSLIACTVERIKAAVSGESNPQ</aaseq> |
| Gene Sequence |
<dnaseqindica>5609..5989#5409..5504#4769..5040#4457..4631#4141..4341#3895..3996#3304..3762#3022..3210#2292..2409#1427..1701#228..314#ctagcttgtgtgctagatctgtttctacttgcgtttgcgttgcttggcaagcaagatatatatatatatatctatatctatctatctatcattctatctccctacatatttagagctagcactttgtgtgttctttgggtttgggacacactcatatacgcgtgttcatgagtggaaatggaaggagctgcaagggcaagaattagggtttgagatataggagtataatgatgatcccggcgaggcatatgccgtcgatgatcggccggaacggcgcagcgtacggatcctcatcggcactgtcactcagccaggtaaagaatttcttttgtcaggaatttgagctgaaaagaaattaatttcaaggggtggcctgctttccttttattttcttgaaaaatccaaagacttttgagcgttttgctgtgctagatttttaccttttgcgtcttctttctctttcttgtgtttgattaatttgaggtgttactacttgagatgaaaagctagaagaggggaaaaaaagcaatacattcagttctgaagtttctgaagataattagtcacactttcttggaaaatgagaagtttcagggttgtggagagagagagaaggggggctatatagaggggagagaaagaggttatctccagtacttagtggttgctgttcacacatattaggtcataagattcagagtacatgagagcctccctttctttaagactggcctactcctctccctactcctatataaggggagcagatgaacaggtcagctgatagatagatagataggactatggagaggagggagattttccaagttgctgatcttgcacacatattgagagggaaacctgtagatcatcttcaacaggtttgttgttgcttgcttccttgttcttccaagctttttgggtctttgtgttgtggcactcttgaagaagaaacatatcgatctagctaccctttctttcttattcctctttgcaagcttgctttcacatcttctgcatataccaaagggaatcaaaaaaggagaaaagtttcttcacttagcttgtctcctcatcccttcctgatttaaagcaatcttccattttatccccaaatttttttctgtgtttttatgaagtatgaacacaccagatttttccttgcagaaatgagaaagttatcaatatgggttgtttttgttcatgcatacaattttttcttctatcttttccacaaaactttgaacttctccactttgtctagtatctatttaatgcatatgccatgtataaaacgcacggaataaataggtactactactgtaaaggcgtaatctgtggtaccaaattggtagctaagttttgctctttatgtagcacacgcatactaatcctcaattaattcgatctgctccaaaattcgcagccaaacttgctggataatcaccagttccagcaagcgttccagcatcagcagcagcagcatcatctccttgaccagatcccggcgacgacggcggagagcggcgacaacatgatccgcagccgtgcgtccgaccctctcggcggcgacgagttcgagagcaagtccggcagcgagaacgtcgacggcgtctccgtcgacgaccaggaccccaaccagcggccgcgcaagaagcgctaccaccgccacacccagcatcagatccaggagatggaagcgtaataacactcaactcatagctatttacttaattaattatgtgttcttgattccatatagtatatactttgtttgattgtcctagaaatgtgacatatttgagttcagttcagttttgccccagctagcttgttcttggaatgttattcatgggtgttctaattcagaaaattacgcatgaaatgctgtgttagtctactgaaatcaatgtgaggagatgagtacaaatggaacagctggttaattatactgtctttaattaatttcccatggactgatgtaagcttgcgtagaagtcaaattgatttctcttgcccgtccatttcccctggacgaactgcataaagttgactcgttgatcaaaaccgtttttgttcttttgcactctcccccaaacaaaacggaagacgaagcattcaagaacgtagtacgaattttgcgttcacacgttcaaccgaacttcaaaaatttccccttctaatttatttttcctggatgcattaattcgtacgtactattaacttactgatgactaatagaattaaattaatctcggttcatctgttctaaatctatctgatctgatcagattcttcaaggaatgtccacacccagatgataagcagcgcaaggagctgagccgggagctcggcctggagcctctccaagtgaagttctggttccagaacaagcgcacccaaatgaaggtgaaaaaacctaattaatcacccaaatagttgttgattctgctcatcattttcacctttctttcacctgtgttcgtagcagtacaattcttttttttaggaaacacatgtacgtgtaattaatcaggacgttgcaacctgcaagcgagtgcaaatgcaacggattctttggatttctggttgagaaaatttcggccggaaagaaggcgagcttgcgagatagagagaagagagagagcgtcgtcttcttcttcctcctcgtcgtcacaaccacttcatttaagcctctgacctagctcctgcaggacgcattcatggcgtattactataactggacaaggcttgcccacgcacccccatgtccgcttctgcattgcacactgccaaatgtggcagttgcaggcctacgcctccgtccgtcctccatagtcaaacccttcccctaccttgctgacctagctgcatacgtgtacagtgattggaattaacagtttgcacgaacgaacacactgtcatagtgtcatcgtcaatccgttgcaaagattttcgaagtttttagcttgaaatttgagtaaaaatggtgtgtgatttgatgtgttggggagagtgcagaaccagcatgagaggcacgagaactcgcagctgcggtcggataacgagaagctccgggccgagaacatgcggtacaaggaggccctgagcagcgcctcctgccccaattgcggcggccccgccgccctcggcgagatgtccttcgacgagcaccacctccgcatcgagaacgcccgcctccgcgaagaggtagttttcaccatatctgaacaatcgatcgatcatggtgacaccgccattgcatggatcgtcgcacgctgatcgtgtcgttgtgcttgtcagatcgataggatatcggcgatcgcggcgaagtacgtggggaagccaatggtgccgttcccggtgctgtcgaacccgatggcggcggcggcgtcgcgggcgccgctggacctccccgtggcgccgtacggcgtgccgggcgacatgttcggcggcggtggcgccggggagctgctgcgcggggtgcagtcggaggtcgacaagccgatgatcgtggagctcgccgtggcggcgatggaggagctggtccgcatggcgcagctggacgagccgctctggagcgtcgcgccgccgctcgacgccacggcggcggcgatggagacgctcagcgaggaggagtacgcgcgcatgttcccccgagggctcggccccaagcagtacgggctcaggtcggaggcgtcccgcgacagcgccgtcgtcatcatgacgcacgccaacctcgtcgagatcctcatggacgcggtaagctcttggttaattttctgtcagtcagtgcgctattcttgtctgaatgttttttagtttggtgatttttatgatcctgtttgattgttggggtctgaatttcgttcaaattttgagtgaattgcgcagaatcagtacgcggcagtgttctcgaacatcgtgtcgagggccatcacgctggaggtgctgtccaccggcgtcgcggggaactacaacggtgcattgcaagtggtatgtgttcatgcttgtcttaaaaattttgtctcctttctgaatcttctgtcatattcggtagtaccaaagaattcgaagtgtgtacatgttggtcactgaaatgggacaaaattgtgttggttttggccgttttctctgcagatgtcagtggagtttcaggtgccatcgccactggtgccaacgagagagagctacttcgtgagatactgcaagcagaacgcagacgggacatgggccgtcgtcgacgtctcgctggacagcctccgccctagccccgtcctcaaatgtcgccgccgtccgtcaggctgcctcatccaagaaatgcccaatggctactccaaggtgaccatcatcagctcatcatcatcatcatcacaaatcaaatctgaaattctgaattcaagatatattgctgttcagaaatcatggaaaactgatgaaattgttgtatgatcaggtgacgtgggtggagcatgtggaggtggacgacaggtcggtgcacaacatctacaagctgctggtgaactccgggctggcgttcggcgcgcggcggtgggtcggcacgctggaccgccagtgcgagcgcctcgccagcgtcatggccagcaacatccccaccagcgacatcggcggtaagtaattgatcgagcatgcagcgaatttcaccctttaatttgatccaaaacgaaattaaaattcagatatgttcaatcactaaaccacgcagtggatttaattgtgtttgttgaatgaatgaatataattgcagtgattacgagctcggaggggaggaagagcatgctgaagctggcggagaggatggtggtgagcttctgcggcggcgtgacggcgtcggtggcgcatcagtggacgacgctgtccggcagcggcgccgaggacgtccgcgtcatgacgaggaagagcgtcgacgaccccgggaggccccccggcatcgtcctcaacgccgccacctccttctggctccccgtccctcccaagcgcgtcttcgacttcctccgcgacgaatcctctcgcagtgaggtactccctctgttttatatcataagtcgcttttacgtcaaaaaaaaagtcgctttgttttttattcagatgaattttgtaaaaaaaaacatagtagcgcttttaatacaaagcaaacacattttatcacaatatattcaatattaaatttaataaaactaatttaatattttatatgctattaatttttttaaaattttatttaacttaataaagtttgactaggaaagaagtcaatacgacttataatattaaacagatagaatacctataaatccatgataaggttaacaagaatacaattacaaactcttagttcgcgaaaaaaattacaaaatcttaaactttgaaaataaatttattttcagtgggacatcctctccaatggcggtatcgttcaagaaatggcccacatcgccaatggccgggatcagggcaactgcgtctcacttcttcgcgtcaacgtaagcagcaattcatccaagatcaaaacgcaagatatatacgagcatgcgataatgcgcgatgtattgatcgatcccgtttcatgtacaaatatatattgcagagctcgaactcgaaccagagcaacatgctgatcctgcaggagagctgcacggacgcgtcggggtcgtacgtcatctacgcgccggtggacgtggttgcgatgaacgtcgtgctaaacggcggcgacccggactacgtcgcgctgctgccatcgggcttcgccatcctgcccgatgggccggcgcacgacggtggcgacggcgacggcggcgtcggcgtcggctccggcgggtcgctgctgacggtggcgttccagatactggtggactccgtcccgacggcgaagctctcgctggggtcggtggcgacggtgaacagcctcatcgcctgcacggtggagcgcatcaaggcggccgtctccggcgagagcaatccgcagtagcttcgtccttgaatcaaacaaaagcttcttgtgctttcaatttcaggtacaaatgcaccaaattacttcagaactcttgcgagattaattgcatcagttaatgagaggtatatctgtaaaatttctgatgagtttgatcatgtttgtgtgcaggagcagcaaaattttggagctttcatcagtgggaagtcaagaacgcacctcagactgtccttgccatgtggtgcccatatatagtttggattatttttcgctagtttttccgcaaattcgggaaatttcaaaaaaaatgtgtcaccactacgcaagggcggttggttcgggtattgacttcctcttcatgttcgcctctcggatgctgctaccttatgaatttagggttcttctggagtacaaaaaaaaccccttaatttgatctgtaatttctgttgttcagacttcccagtacctagctagctagtaggagttgcagaatagagatctgtgtccctgtcttatacttttagttctcttcagtgtttgatcagtgctgtttcaatcc</dnaseqindica> 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| External Link(s) |
