Os04g0628200

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Revision as of 11:29, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0628200| Description = Haem peroxidase, plant/fungal/bacterial family protein| Version = NM_001187173.1 GI:297723476 GeneID:9267450| Length...")
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Gene Name

Os04g0628200

Description

Haem peroxidase, plant/fungal/bacterial family protein

Version

NM_001187173.1 GI:297723476 GeneID:9267450

Length

7226 bp

Definition

Oryza sativa Japonica Group Os04g0628200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:32364320..32371545

Sequence Coding Region

32367018..32367062,32369746..32369934,32370157..32370325,32370947..32371359

Expression

GEO Profiles:Os04g0628200

Genome Context

<gbrowseImage1> name=NC_008397:32364320..32371545 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:32364320..32371545 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>cctattgacctatcacaaattcacctgccatcatgttcgttcagtggttgcgatggctctatacttctggatagcacaccaggatcaccatctgagaaggaatcaataccaaacctcagtctgcgaggttttggcacaatagaccgtgtcaaagctaagctggagcaagcctgccctggagttgtgtcctgtgctgatatccttgctctggtagccagagatgttgtcttcttgaccaaagggcctcactgggaagttccaactgggcggagggatgggacaagatcagtgaaggatgatgctgtgaacaacctccctccccccttcttcgatgccacgcggaacttgtatcaattcttcatcccaaagggccttgacgcaaaggatcaggtggttctgctaggtgggcacactcttggaacctcccattgttcatccttcgccagccggctgtacaacttcagcggcatgatgatggccgacccgacgctggacaagtactacgtgccgaggctgaagagcaagtgccagcccggcgacaagacgacgctggtggagatggacccggggagcttcaggacgttcgacaccagctactacaggcacatcgccaggggcagggcgctcttcacctccgacgagacgctcatgctcgaccctttcaccaggggctacatcctccgccaggccggcgtcgccggctacccggcggagttcttcgccgacttcgcggcgtccatggtgaagatggggaacatgcaggtgctcaccggcgcccagggggagatcaggaagcactgtgcctttgtgaattag</cdnaseq>

Protein Sequence

<aaseq>PIDLSQIHLPSCSFSGCDGSILLDSTPGSPSEKESIPNLSLRGF GTIDRVKAKLEQACPGVVSCADILALVARDVVFLTKGPHWEVPTGRRDGTRSVKDDAV NNLPPPFFDATRNLYQFFIPKGLDAKDQVVLLGGHTLGTSHCSSFASRLYNFSGMMMA DPTLDKYYVPRLKSKCQPGDKTTLVEMDPGSFRTFDTSYYRHIARGRALFTSDETLML DPFTRGYILRQAGVAGYPAEFFADFAASMVKMGNMQVLTGAQGEIRKHCAFVN</aaseq>

Gene Sequence

<dnaseqindica>2699..2743#5427..5615#5838..6006#6628..7040#gggcccattcggccattccccaatcccaaccatcgcgtcctactccagccgccgctgccacccacgtccgtcggcgccatggccgccgccaaggagctccttcgccggctccagcgaccagcgtccctgcgcggctgcagttcaactgtttttggtgtcgtcccctctgtcctatctctttctgcttcttctcttcagcctaaaaaatttggtcattcccttttgtctgctttccaatctgcaaaagcacataattttttcttcatctccattttttcttcttctccatttaatctttcttctatgctattgaatcataacggtacgtttaatttatccaatcaccttttttttcacactttgattttcatgtgctagatggataactgatggtggtatgactgaatttgattcttcagaaggcctttattggatttatggattgaagccaactttgtatagttcagttttctagcccttttgcatgaaaaatatatttgcagctgctcatttctactgccggttagtagaactgaatctaaatatattcagatttttgctcctggtgtgtttcgtgctcatattattggattgccaaaccctgccataaattcatgaattcatgaattgttgagtctcgggagatcaaaattgctccgaggagggagaaaagcgcgcgcgaatggcgctcctaatgggggcgaaacccaccgccccattatactcctccctgctccagtgctgcatcagctcctgcgcattccggcaaggcaagtccgtccacggcagggtcgccgccgcgtccgcctctcctccggacctgcacctgagcaccaagctcgtcatcttctacgcgcggttcggcgacgtcgccgccgcccgcaaggtgttcgatggaatgccgcacaggagcgtcgtgtcctggacggccatggtctccggctacgccaggaacgggcgcccgcgggaggcgctggagctgttcgcgctcatgcgcgcgtcgggcgcgcggccgaaccagttcacgtacgggagcgcggccagcgcgtgcgcgggggccgggtgcgccaggagcggggagcaggtgcacgcgtgcgctgccaaggggaggtttgcgggcgacatgttcgtgcagagcgccctcatggacatgcacctgaggtgcgggtccgtggaggatgcgcggcagctgttcgcggagatggggaagaaggatgtggtgtcctggaatgccctgatcagggggtttgtggaacgcgggcatgacggtgatgcgcttggattattctcttcaatgctgaaagaaggtatgccgtccctccttttgctttaacaatcttgagcatttttcctgtaatcatgctgcctattatgtcctagcatgaaattgcaaggtagtttttgctgatggtattggcactaaaattgaaagtgctttcttttttttacatcaaaataattgacagcgatgattcctgaccattacacgcttggaagtgctctaaaagcatgtggaatagtcggtgttgctgtcaatgttgagctaattcacagttgcatcatcaaattgggttactgggatgaaaaggttgtcatcggatcacttatcaactcttacgcaaaatgtcggagtatgagcagcgcaagagtgatatatgattccatctctgaaccagatctcgtgtcatcaaccgcactgatcagtgggtacaccatggatagaaactacagtgaagatgcaatggagctcttctgtaaaattcatcggaagggtttatggattgatggtgttctattaagctcagtgctttgcctttgtgcaagcgttgcttctgcaagatttgggacacaaattcatgcatatatgtgcaagaagcagcctatgggtgatattgcattggacaatgctctggttgatatgtatgcaaaggcaggagaattttcagatgccaagcgtgcttttgatgaaatgccctatcggaatgtgatttcttggacgtcacttattactgcctgtggaagaaacggttctggagaagatgctgtgactctttttaataggatggtggaagatggtgttaggccaaacgatgtgacattcctttctcttctatctgcatgtggtcattgtggtttgacaaacaaagggatggagtactttacttccatgatgagcaggtatggtattgatccaagagctgagcattacagctctgctattgaccttcttgctcgtggaggccagttagaagatgcatggaaacttgtccagaagacaaacttaaaacccaactcatcaatgctgggtgcaatgcttggagcctgtaaattgcatggaaacatgcttcttggagaaactgcagccaagaacctttttagtatagatcctgggagttctgtaaactatgctgttcttgcaaacatgtatgcagaatgtagtctatgggaggatgcacagaggacgagagaagtaatagatgaaacaacagatggaaaggaagttggtttcagtgtcatctgaatatgacagaaacttttccactgcaagaaatttgtatcacagtttttagccactgatagatgcatcagatgaacctcaaattctgggccactttgacaagccgcaacacacttcagagttcagactccagagttaaccaatttctgcctgttcagttaaacagtgaatagctcatgacctattgacctatcacaaattcacctgccatcatgttcgttcagtgtaagttttttgttcatctgacttctgtgggttactttccttgataaataattttctgaattgttactgtgctttaaatcttaattagtcccataattgtttaggactgtagatgtgtttttgcaagtcacataacgttgattagacagaataattatgggatattaacccttctcttttaaaagcaattttgatgtcctataagaatatcgtagaaaacatttattaagtattaactagactgtgagttgctgctgaacatgactaaaggggttggcattttttttcttatgtgcatgaacaagtcatgaggtaaaaattggagtactgtttaattcctatggaaaaggtcgaacttgtcaatgtccaccattgttgaacaacttcatggtcaaaactgtcctgcactcccttgctgtttgagtgaagcacacattttgagctaggtcaactaaaaatttctttacctgctgtgaatgtcttagacttgaattcttgaacaaccaaaagacatcacttttcagttactccaagagtaattgaatacattgcccaagccatgtggtagtgaacacttaaaccattgttatctcctgtggtgcaggattttgacaataggggtgaagatgtaatgatgcactagtagatagtatggaatattgatagagaaaattccatgattccattacaacagacagaaaaaaaaaacctgcattgattttttatagggcatctttaaatttcaaaatgtcaaattatgtatattttgaccagcaattaatcaaattaatataattaatatatatttaatgtgaaatttgtgcccatagattcatatttcaaagtgcgttcacaaaatattggctttatagctattaagaatataattctgagaaatcaatggccaatgtttaatcttgaatttttgttttcaaattaaaatatgccctataaagaccaatggaatctaaaaaaataaagaaaaataaagtttgacatgtattacatacaaaatttttaacactttgggattcttatctaagtgcacattgtatacgtacatgtaatcctatatatttggtgttttttcaagttttaggggtgcatctgtacccccacgcactatggtgtccaccattggttctgttcactactcctgacttgttttcaccttttttttattattattctctggagagctcagcggaaggttatcttgagcccagcagttatttattaacttaaaggctgcaactaatatctgaccaatggaccgattttctcagtatgatagggattcactgaaggtttacttacacaaactcttgcattttttattcaaacatagagaatctttttccataacttgcacatcatgttctcatctttcttagagtgtttatatgcttgatcaaacctaaattttgcttcaaaatgaagtatctgcacattgcctgagatgcttctgcacccgtttggcattcaataattagctagcagtgatcatgttgattctcttctaacttttctcccttgatttgcttcattgacacgagcacaactgtcatgcaacctttttttttctcaacttaatttcaaaggaagaagattgatttcatcaaacaatgggttgttgctttgatattatttactttaactgactggtgccagttaagaaattattatgggcagttcctttagtgttcagatgcaatcccaagagaaactagcagtgataatgtcatagcgaggcaaccatattatattccctggttcccttaaatactaacaaaacaggaaatggattgtttttctttcttttccactttgcatgaacatacacaatttcctctggaacaaacgacaacggataaactgatatattatctcatatctttgaatccttctgaacttctttaccagaataaattcaacccatataatatttaaaataaaaaattagaacagctagagagtattaccttttagcaacatgtcgtgacctattcatcaatacaagagcctgtattactcacaagtgcacaagccacgaaggatgaccaccaccaactaattatgcaatattaccaggtaatactatctagatgcctgatccaagacttgcgtattcttcaattgaagtacatgcacacaactcatagggcttgtaaaatctcgatctccaagtcttagaccatctgcttgttgcattaggaaaaataaaatgaagctgtgggaaatggtttatgtcacttgtttactatagtacaacctaagcaactgagctataaagcaggctgcaagttataatttgcctcaacaatcatagaaggcaactctttcatcataggcagtggttccacagtagtcatgcacaacatgccttacagactcctcttcggatttgtcctttctcttgtcctacagttctccttagtattatccaatccaccagggctaaacattggcttttaccaatacacatgtccaaaagcagaggtcattgttcgtgatgagatgaccaagatcatatcccgagttccaagtctcgcaggccctctacttcgcatgcatttccatgattgttttgtgaatgtatgcatactgcttaccatgctctgagctgttttgattttgaattgagtttatcctactaagctatgtgcctctatgtgttttgcagggttgcgatggctctatacttctggatagcacaccaggatcaccatctgagaaggaatcaataccaaacctcagtctgcgaggttttggcacaatagaccgtgtcaaagctaagctggagcaagcctgccctggagttgtgtcctgtgctgatatccttgctctggtagccagagatgttgtcttcttggtaagaactagcttccatgttcattaatcttagttcattctttagttagaaaagttagtatagtttggctaagtggtgagaattggctgttttaggccgacaatagtggaaaaccacacagtttgattttcaccatattctacgtggctattggatttcttgctgcttacagtaactagaactatagttgagaaaagtccctattcttcccttgtgcaacagaccaaagggcctcactgggaagttccaactgggcggagggatgggacaagatcagtgaaggatgatgctgtgaacaacctccctccccccttcttcgatgccacgcggaacttgtatcaattcttcatcccaaagggccttgacgcaaaggatcaggtggttctgctaggtatatactattcttcactaacttcaatgtttaatcttcatagactagctccctagatgatttatactgtacttactgaaagttgcaactctcggttctgttgcctgtgctccttttaaacactctgctgatcccgatatatcccagtagcattctccaataaaggtgatcacttatttaattactatacaacttgttaataaaggaaggtatcatatgcgcataccaagtcaacaaaatgggaagtacaaaactatgtggttcttagttctaatcacatggcacagtacagaaccaagccaggagaccaagaccactttatcctcaaacacagcatagctctttattcgagtggtcaaaacatcgtttcctgttcagcaccatactcatttgtgcacttgcaaaattcatggttttaaatagcgggttaagatatttagcgattgaccttctcaaacagctatagcgaacttaatggagctatagtggctaagactcttctcaaacagctatagccagagattcaaaaccatggcaaaattgcaatccaaacttgtttaattaccaagaactcatcacaaatgtgcatatgcaatttgagaagtgacacattgttcacaggtgggcacactcttggaacctcccattgttcatccttcgccagccggctgtacaacttcagcggcatgatgatggccgacccgacgctggacaagtactacgtgccgaggctgaagagcaagtgccagcccggcgacaagacgacgctggtggagatggacccggggagcttcaggacgttcgacaccagctactacaggcacatcgccaggggcagggcgctcttcacctccgacgagacgctcatgctcgaccctttcaccaggggctacatcctccgccaggccggcgtcgccggctacccggcggagttcttcgccgacttcgcggcgtccatggtgaagatggggaacatgcaggtgctcaccggcgcccagggggagatcaggaagcactgtgcctttgtgaattaggctgcaaatatatatacaaccgctgaactgcatttgtctgaagtgttagctgtttgatattccttggtatatgtagaattattgtgaaatatgttttgttatgcctttgtttgtattatgatgtacaatcaaagtaaactatttgcttcattcaaggaaataaaatgttgcgtaatgccttcggtg</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0628200, RefSeq:Os04g0628200