Os04g0630300

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Revision as of 11:30, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0630300| Description = NAD-dependent epimerase/dehydratase family protein| Version = NM_001060508.1 GI:115460745 GeneID:4337096| Length = 2...")
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Gene Name

Os04g0630300

Description

NAD-dependent epimerase/dehydratase family protein

Version

NM_001060508.1 GI:115460745 GeneID:4337096

Length

2831 bp

Definition

Oryza sativa Japonica Group Os04g0630300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:32458098..32460928

Sequence Coding Region

32458141..32458261,32458531..32458697,32459451..32459669,32459762..32459921,32460315..32460534
,32460617..32460770

Expression

GEO Profiles:Os04g0630300

Genome Context

<gbrowseImage1> name=NC_008397:32458098..32460928 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:32458098..32460928 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcggcggttgagaggaagacggcgtgcgtgaccggcggcagcgggtatatcgcttcggcgctcatcaagatgctgctgcagaagggatacgctgtcaagacgacagtcagaaaccccgatgatatggagaagaactctcatttcaaggagttgcaagcactaggccccttgaagatcttccgcgccgacttggaagaggaaggcagtttcgacgaggcagttgccggctgcgattacgccttcctcgtcgccgctccgatgaacctcaagtctcagaatcctgagaaagaactgttggaagccggcgtccaaggcactctgaacgttctgaggtcgtgcgtgaaagccggcacggttaagcgcgtgatcctcacatcgtcggcggccgccgtctccggccagccgctgcaaggagacggcaacggcagcagccatgtcctggacgagtcgtcctggtccgacctcgactacctcagatcaaccaacgggatatctcctgctcaggcttacgcgatcgccaaggttctctcggagaaggaagcgagcaagctggcggaggagaacggcatcagcttagtggcggtgtgcccggtcgccaccgtcggcgcgtcgccggcgccggtggccaacgagagcgtcgccaacgtcctctccttgctgtccggcaacgaggagatcaacaccctgagaatgattgaccagtactccggcgggctgaagctggttcacgtcgacgacctctgccgcgccgagatattcctcgccgagaaagcgtcgccgtcgccgtcggggaggtacatctgctgcgccctcaacaccaccatgcggcagatcgcccgttccctggccgccaaatacccgcaccacaacgttgacatcgatgcactcggcggcggcctccctgagaagccgacgatcctcctctcgtcggagaagctgaccagtgaagggttcgagttcatgtacaagacggtggatgagatgtacgatgatgccttcgtggagtacggcatggcactcgggattctgcactactga</cdnaseq>

Protein Sequence

<aaseq>MSAVERKTACVTGGSGYIASALIKMLLQKGYAVKTTVRNPDDME KNSHFKELQALGPLKIFRADLEEEGSFDEAVAGCDYAFLVAAPMNLKSQNPEKELLEA GVQGTLNVLRSCVKAGTVKRVILTSSAAAVSGQPLQGDGNGSSHVLDESSWSDLDYLR STNGISPAQAYAIAKVLSEKEASKLAEENGISLVAVCPVATVGASPAPVANESVANVL SLLSGNEEINTLRMIDQYSGGLKLVHVDDLCRAEIFLAEKASPSPSGRYICCALNTTM RQIARSLAAKYPHHNVDIDALGGGLPEKPTILLSSEKLTSEGFEFMYKTVDEMYDDAF VEYGMALGILHY</aaseq>

Gene Sequence

<dnaseqindica>44..164#434..600#1354..1572#1665..1824#2218..2437#2520..2673#cttcgtctactaggagaggcgaagtagccaactaaccgcggcgatgtcggcggttgagaggaagacggcgtgcgtgaccggcggcagcgggtatatcgcttcggcgctcatcaagatgctgctgcagaagggatacgctgtcaagacgacagtcagaaaccccggtgagattcttcttacttctcaccccaacaatggtctgtagatcgtcttcagttcattgattttgtgtgtatgcggtgacgatagatccgggcagtaacagcatgctgtgtgcatagaagattttgcggtgttctgtttggtagaagataaatgctgatgtttgatttgtttcaagttgatatgaccgaagaaaactatttcgggaattcacaagaacaccattggtttggcctctgaaactgcagcgcattgtgattttgagttccagatgatatggagaagaactctcatttcaaggagttgcaagcactaggccccttgaagatcttccgcgccgacttggaagaggaaggcagtttcgacgaggcagttgccggctgcgattacgccttcctcgtcgccgctccgatgaacctcaagtctcagaatcctgaggtaaatgcatgcagacacgtagcacatctcccaccaaactcagtgccattgtggggccaagtgccactcgatgttgtccacttgtcctaggtagtaattgccacttgtcaagtctctgatcgctgccaggccactgttgattagatatcaattatgtcacattaattactattccttcctccaaaataagtttgttttttacctatctcacacaaaccaatatttacctacaagcctataatatactcactttattaaatcccaatataattatttctatttttatttattctcaatacatatatactatcatattttcaagaactctaatgtaatgattagttaaaaataaatttattttgggataaatgggagaggcttatcatactttcacatgatgtaatgattactttaaaaataaatttattttgggataaatagaaaagtctaaaactgaatttattataggacggaaggaataatatttcctcccataaaaatcttgtctctgaaataataataataataataataataataataataataataataataataataataataataataataataataaacaactttattatgtacgtgtccaatccaatactatgttgttttattttgaaacgggagagtacttttacttgtatcgtcacgattaatttacttggtttgtctagtaaatcctctccataataaccagctgaaataacgatctagagtattatttggtaatggcagaaagaactgttggaagccggcgtccaaggcactctgaacgttctgaggtcgtgcgtgaaagccggcacggttaagcgcgtgatcctcacatcgtcggcggccgccgtctccggccagccgctgcaaggagacggcaacggcagcagccatgtcctggacgagtcgtcctggtccgacctcgactacctcagatcaaccaacgggatatctcctgctcaggtacacacaaacttacaaaattttacatgttcagtcagagttgatagtacagtcgcttgcgtgagagcacagcggtggtgtttgcgctgcaggcttacgcgatcgccaaggttctctcggagaaggaagcgagcaagctggcggaggagaacggcatcagcttagtggcggtgtgcccggtcgccaccgtcggcgcgtcgccggcgccggtggccaacgagagcgtcgccaacgtcctctccttgctgtccggtgagtacgtaagcaccggcagtattgtttggagatcatggatggaaactctttccctccgcacggaaaacggaacagttcattaacacatgattaattaagtattagttaacttttttaaaaaaatagattaatttaatttttttaagcaactttcatatagaaagttgctgcaaaaacatattgtttagcaatttgaaaagcatgcgcgagaaaaacgagagagaagattgagaaccctcagtagcaaacacgacctaagtgtgctagaataaactccttcttccaaaaacccaacctagtattagaatgtaatataatttagtataacgagagttttcatggtatggagggagtatctggttcggactcacgtgtccgattcgatttcaggcaacgaggagatcaacaccctgagaatgattgaccagtactccggcgggctgaagctggttcacgtcgacgacctctgccgcgccgagatattcctcgccgagaaagcgtcgccgtcgccgtcggggaggtacatctgctgcgccctcaacaccaccatgcggcagatcgcccgttccctggccgccaaatacccgcaccacaacgttgacatcgatgcgtaagacaaaatcatgaactggtctcaaagattatgcgtgtccactgcgagctgactccgacggtggcggcggaacatgcagactcggcggcggcctccctgagaagccgacgatcctcctctcgtcggagaagctgaccagtgaagggttcgagttcatgtacaagacggtggatgagatgtacgatgatgccttcgtggagtacggcatggcactcgggattctgcactactgacgccgacgacaatgctgttactacccagcttcgcaaccaaacggctcttgcaaaaataagtatgtgtaaaacagcagtgaatttgttcccatccgcttttatgaaaaacgtgcctattgacacgtcaaactgttcaataaaattgtgctcctttcaac</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0630300, RefSeq:Os04g0630300