Os04g0632500

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Revision as of 11:30, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0632500| Description = S-locus receptor-like kinase RLK11| Version = NM_001060525.1 GI:115460779 GeneID:4337115| Length = 3774 bp| Definit...")
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Gene Name

Os04g0632500

Description

S-locus receptor-like kinase RLK11

Version

NM_001060525.1 GI:115460779 GeneID:4337115

Length

3774 bp

Definition

Oryza sativa Japonica Group Os04g0632500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:32587954..32591727

Sequence Coding Region

32588457..32588759,32588869..32589019,32589153..32589390,32589495..32589738,32589809..32589987
,32590196..32590294,32590454..32591702

Expression

GEO Profiles:Os04g0632500

Genome Context

<gbrowseImage1> name=NC_008397:32587954..32591727 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:32587954..32591727 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtctattttctcatgttcctcctgctgctctcgattcctctatgcaaaaccgatgaccagctgacactgggaaagccaatctttcccagcgagatgctcatctccaagggcggcatctttgccctcggcttcttccccccggccaacttcagcaatagcctctatgttggagtctggttccacaacatcccccagcgcaccgttgtgtgggttgccaaccgcgacaacccaatcaccaccccttcgtcagcgacccttgccatcaccaacagctcaggcatggtgctgtcggattcccaaggcgacattctttggacagccaagatcagcgtcatcggagcctccgccgtgctgctcgacacggggaacttcgttctccggttggcaaacggcaccgacatatggcaaagcttcgatcacccgactgataccatcctcgcaggcatgatgttcttgatgagctacaagtccgagatcatcggacgcctcactgcgtggaggagccatgatgacccatccactggagatttctccttcagcctcgaccccagctcggacctccagggcatgacctggaacgggaccaagccatactgccgtaacggcgtcagaaccagcgtgacggtgtccggcgcccagtatccgagtaacagcagcttattcatgtatcaaacactcatcgactcagggaacaagctctactactcatacactgtctccgacagctccatctacacacgcctcacacttgacagcacgggcacgatgatgttcctgagctgggacaacagctcgtcgtcatggatgttgatcttccagcgccccgccgccggcagctgcgaggtctatggctcgtgcggcccgtttggctactgcgacttcacgggggccgtcccggcgtgccggtgcctcgatgggttcgagcctgtagatcccagcatctcgcaatcaggatgccggagaaaggaagagctgagatgcggagagggcggtcaccgcttcgtgtcattgcctgacatgaaggtccccgacaagttcttgcagatccggaacaggagcttcgaccagtgcgcggccgagtgcagcagcaactgctcttgcaaggcatatgcttacgccaacttgagcagtggcggcaccatggctgacccgtcaagatgcttggtttggacaggggagcttgtcgactcagagaagaaggccagccttggtgagaacctgtacctccgccttgctgagcctcctgttggaaagaaaaacaggttactgaagattgttgttccgataacagtatgcatgctgctactcacatgcatagtccttacctggatatgcaagcacagagggaaacaaaacaaggaaatccaaaagagactgatgctagaatatccgggcacctccaatgaacttggaggtgaaaatgtgaaatttccatttattagctttggagatattgtggctgcaacagataatttctgtgagtccaatctacttggaaggggaggctttggcaaagtttacaagcgtttccctatttatattgatgacaacatgaagggaatattggagggaggcacggaagttgctgtcaaaaggcttaatgagggttctggacaaggcattgaagagtttaggaatgaagtggttctaattgcaaaactgcagcacaggaacctagttagacttcttggttgctgcattcatgaagatgagaagttactgatctatgaatacttgcctaacaaaagcttggacgccttcctttttgatgctacaagaaaatatgtgcttgattggccaacaaggttcaaaataatcaaagggatagcaaaagggcttctttatcttcaccaagattcaagactgacaataattcatagagatctcaaagcaagcaacatcttgttggacacagaaatgaaccccaaaatatcagactttggtattgcaaggatttttcatggtaatcagcagcaagcaaacaccactcgagttgttggaacatatggttacatgtctcctgaatatgtgttgggtggtgccttttcggtcaagtcagatacatacagctttggtgttcttcttttggagattgtcagtggcctgaaaatcagttcatctaaactcacaccaaactttttcagccttacagcctatgcatggagattatggaaagatggaaatgcaacagaattgttggacaagttttttgttgacagttatccacttcatgaagctttcaggtgtattcacgttgggctcttgtgtgttcaagatcatccgaatgatagaccatcgatgtcatctgttgtttttatgttagaaaatgaaagcacgctgcttcctgcaccaaagcagcctgtgtattttgaaatgaagaaccacggaacacaagaagcgacagaagaaagtgtgtactctgtgaatacaatgagtaccacaacactggagggacgctag</cdnaseq>

Protein Sequence

<aaseq>MVYFLMFLLLLSIPLCKTDDQLTLGKPIFPSEMLISKGGIFALG FFPPANFSNSLYVGVWFHNIPQRTVVWVANRDNPITTPSSATLAITNSSGMVLSDSQG DILWTAKISVIGASAVLLDTGNFVLRLANGTDIWQSFDHPTDTILAGMMFLMSYKSEI IGRLTAWRSHDDPSTGDFSFSLDPSSDLQGMTWNGTKPYCRNGVRTSVTVSGAQYPSN SSLFMYQTLIDSGNKLYYSYTVSDSSIYTRLTLDSTGTMMFLSWDNSSSSWMLIFQRP AAGSCEVYGSCGPFGYCDFTGAVPACRCLDGFEPVDPSISQSGCRRKEELRCGEGGHR FVSLPDMKVPDKFLQIRNRSFDQCAAECSSNCSCKAYAYANLSSGGTMADPSRCLVWT GELVDSEKKASLGENLYLRLAEPPVGKKNRLLKIVVPITVCMLLLTCIVLTWICKHRG KQNKEIQKRLMLEYPGTSNELGGENVKFPFISFGDIVAATDNFCESNLLGRGGFGKVY KRFPIYIDDNMKGILEGGTEVAVKRLNEGSGQGIEEFRNEVVLIAKLQHRNLVRLLGC CIHEDEKLLIYEYLPNKSLDAFLFDATRKYVLDWPTRFKIIKGIAKGLLYLHQDSRLT IIHRDLKASNILLDTEMNPKISDFGIARIFHGNQQQANTTRVVGTYGYMSPEYVLGGA FSVKSDTYSFGVLLLEIVSGLKISSSKLTPNFFSLTAYAWRLWKDGNATELLDKFFVD SYPLHEAFRCIHVGLLCVQDHPNDRPSMSSVVFMLENESTLLPAPKQPVYFEMKNHGT QEATEESVYSVNTMSTTTLEGR</aaseq>

Gene Sequence

<dnaseqindica>2969..3271#2709..2859#2338..2575#1990..2233#1741..1919#1434..1532#26..1274#cgaagcagaaagtctaacaggcaatatggtctattttctcatgttcctcctgctgctctcgattcctctatgcaaaaccgatgaccagctgacactgggaaagccaatctttcccagcgagatgctcatctccaagggcggcatctttgccctcggcttcttccccccggccaacttcagcaatagcctctatgttggagtctggttccacaacatcccccagcgcaccgttgtgtgggttgccaaccgcgacaacccaatcaccaccccttcgtcagcgacccttgccatcaccaacagctcaggcatggtgctgtcggattcccaaggcgacattctttggacagccaagatcagcgtcatcggagcctccgccgtgctgctcgacacggggaacttcgttctccggttggcaaacggcaccgacatatggcaaagcttcgatcacccgactgataccatcctcgcaggcatgatgttcttgatgagctacaagtccgagatcatcggacgcctcactgcgtggaggagccatgatgacccatccactggagatttctccttcagcctcgaccccagctcggacctccagggcatgacctggaacgggaccaagccatactgccgtaacggcgtcagaaccagcgtgacggtgtccggcgcccagtatccgagtaacagcagcttattcatgtatcaaacactcatcgactcagggaacaagctctactactcatacactgtctccgacagctccatctacacacgcctcacacttgacagcacgggcacgatgatgttcctgagctgggacaacagctcgtcgtcatggatgttgatcttccagcgccccgccgccggcagctgcgaggtctatggctcgtgcggcccgtttggctactgcgacttcacgggggccgtcccggcgtgccggtgcctcgatgggttcgagcctgtagatcccagcatctcgcaatcaggatgccggagaaaggaagagctgagatgcggagagggcggtcaccgcttcgtgtcattgcctgacatgaaggtccccgacaagttcttgcagatccggaacaggagcttcgaccagtgcgcggccgagtgcagcagcaactgctcttgcaaggcatatgcttacgccaacttgagcagtggcggcaccatggctgacccgtcaagatgcttggtttggacaggggagcttgtcgactcagagaagaaggccagccttggtgagaacctgtacctccgccttgctgagcctcctggtaagcaaaatttcacactgtcgcctcgttttcagatagtggcaatgctcatgatattatatgagagttcctataaaaaaatgtagttatatgaacacttaactttccaagttatgctccatgccataacactaacatctgaggtgtacatttctgcagttggaaagaaaaacaggttactgaagattgttgttccgataacagtatgcatgctgctactcacatgcatagtccttacctggatatgcaagcacagaggtagatgatataaggccttgtcttccaaatgtaaagctacttcgtaatttgaaagataaatgcattgacaatgacttacggttcttgagatagcactggtgcctcgacactatagagataccgggaatttacactaaaattgtatagtgcctccagatggtaccttcttaagtatattgtaaaaatctcatgtgttgaactttatcagggaaacaaaacaaggaaatccaaaagagactgatgctagaatatccgggcacctccaatgaacttggaggtgaaaatgtgaaatttccatttattagctttggagatattgtggctgcaacagataatttctgtgagtccaatctacttggaaggggaggctttggcaaagtttacaaggtaagaaagagtactaaatttatctacatcataacacgttttgaaactatataaaatattactgccccagcgtttccctatttatattgatgacaacatgaagggaatattggagggaggcacggaagttgctgtcaaaaggcttaatgagggttctggacaaggcattgaagagtttaggaatgaagtggttctaattgcaaaactgcagcacaggaacctagttagacttcttggttgctgcattcatgaagatgagaagttactgatctatgaatacttgcctaacaaaagcttggacgccttcctttttggtgtgttatgactttctatcccattgcaaaaaggttcttacattgactaaaatatatttatgatgactaacattagattttgtacatactgatcttgttgaaagatgctacaagaaaatatgtgcttgattggccaacaaggttcaaaataatcaaagggatagcaaaagggcttctttatcttcaccaagattcaagactgacaataattcatagagatctcaaagcaagcaacatcttgttggacacagaaatgaaccccaaaatatcagactttggtattgcaaggatttttcatggtaatcagcagcaagcaaacaccactcgagttgttggaacatagtaagtaataactagtaattagcccactagatagttttcaacactctaggttttattgactagttaaattcaaactgtgaattaatccttgccaacgattgtgcattcattgctaatgaaatggtttatacagtggttacatgtctcctgaatatgtgttgggtggtgccttttcggtcaagtcagatacatacagctttggtgttcttcttttggagattgtcagtggcctgaaaatcagttcatctaaactcacaccaaactttttcagccttacagcctatgtaagtactctaaaatgccgataattttgataccaaattaaactttagcagtcagcagtattttggagcaacaggcattagtaactttggtcagaacttcattctacaggcatggagattatggaaagatggaaatgcaacagaattgttggacaagttttttgttgacagttatccacttcatgaagctttcaggtgtattcacgttgggctcttgtgtgttcaagatcatccgaatgatagaccatcgatgtcatctgttgtttttatgttagaaaatgaaagcacgctgcttcctgcaccaaagcagcctgtgtattttgaaatgaagaaccacggaacacaagaagcgacagaagaaagtgtgtactctgtgaatacaatgagtaccacaacactggagggacgctagactaagaggtcaagctttactatacatgatttcagcatagataattctatgtttttacaatttaatgcttatgataatgaatttcagtgatgtgatatatgactttaaatctttaatggaaaacagtggagtttgctgcgtggtgaagaatgcttgtgaatattaatcttattgattggtatttatatataaaaaatgttacattgcagacaaggtattgcttacaaatttgcaaacactgtatttctattccacatgtggttgcttttatctgaagttaatcataaacctaaaagaatgtgacatgtttacaaatacacaaattataatggcatttttaaaaaccaattaaaccatttgttttagccaaaaggtcataagccggcttttaatagaagataataaccaaagactatggttggtattgaaatagatatccaaattagcaatgcctggccatgatttccattccatagaggccggatttctatccatttacctct</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0632500, RefSeq:Os04g0632500