Os04g0633300

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Revision as of 11:30, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0633300| Description = Curculin-like (mannose-binding) lectin domain containing protein| Version = NM_001060530.1 GI:115460789 GeneID:433711...")
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Gene Name

Os04g0633300

Description

Curculin-like (mannose-binding) lectin domain containing protein

Version

NM_001060530.1 GI:115460789 GeneID:4337119

Length

4566 bp

Definition

Oryza sativa Japonica Group Os04g0633300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:32627613..32632178

Sequence Coding Region

32627613..32627636,32628030..32628107,32628272..32628419,32628509..32628746,32628829..32629039
,32629118..32629299,32629384..32629485,32629628..32630936,32631525..32631607
,32632055..32632178

Expression

GEO Profiles:Os04g0633300

Genome Context

<gbrowseImage1> name=NC_008397:32627613..32632178 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:32627613..32632178 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgacgcagatcatcaacgtgccgcgttcaactctcagatcattttggtcttctggcttatttggaaacaacgttaatgcaaaaatcttccaatctgaatccaatacgcctctggagtctggaggatctattgtacttgttggcagccttgttttattagttacagttgtactgttctggccaggttcttttgccgtcccgggaaagagctcctgccttgcttgtccaaaaaagaagaacaagggccagatgaatatggcctacctcccagttctcatctacttgctgctcatctctttctgcaaatgcgatgatcagctgacacaggtaaatcgattgatctcccccagcggcaagctcgtctccaagagcggcgtctttgcactcggtttcttctccccagccacttccaaccagagcttattcctcggcatatggtataacaacatcccagagcgaacatacgtttgggttgctaaccgtgacaacccaatcaccacaccttcatcagcgatgctcgccatcagcaatagttctgaccttgtattgtcagattccaaaggtcgcaccgtctggacgacaatggcaaatgtcaccggaggtgacggagcttatgcagtgctgctcgactcaggaaacttggttctccggctgtcaaacaatgtaaccatatggcaaagtttcgatcacccaactgacaccattctgtcgaacatgaagattctgctgaggtacaaggagcaagtaggcatgcggcttgtagcttggaagggccttgatgatccaacaacgggggacttctcatgcagcggagaccccagctcagaccttcaggtcttcgtctggcacgggaccaagccatattaccgctccattgtgcttgacagtgtgtgggtgtccggcaaagcatatggcagcagcacctccttcatgtaccaaacatatgtaaacacacaggatgagttctatgttatctacaccacctctgatggctcaccatacatgcgcatcatgcttgactacacgggcaccttcaggctcctgagttggaacgtcaactcgtcatcatgggcaatctattctcaacgcccagcagccattggcgattgtgatccctacggctcgtgtggcccattcggttactgtgacttcacgtcggtcatcccaagatgccagtgcccggatggatttgagcctaacggctccaactcttcaagtggatgccggagaaagcaacaattaagatgtggagaagggaaccatttcatgaccatgcctggaatgaagctccctgacaagttcttttatgtccaggacagaagctttgaggagtgcgcggctgagtgtagccgaaactgctcatgcacggcctatgcttacaccaacttgaccataaccggctctcccggtaccacagccagccagtcaaggtgcttgctttgggttggtgagcttgttgacatggcgaggaacaatcttggtgacaacttgtacctccggttggccgactctccaggtcataaaaagagcaggtatgtagtcaaggttgtagtccccattatagcatgcgtgctaatgctcacgtgcatataccttgtctggaaatggatatcaaaaggtgaaaagagaaataatgaaaatcagaatagagcgatgctaggaaactttagagcttctcatgaagtatatgagcaaaatcaggaattcccatgtattaattttgaagatgttgtcactgcaacaaacaattttagtgattcaaatatgcttggagaaggaggtttcggcaaggtttataagggcaagttgggaggtggcaaagaaattgcggttaaaagactcagtacaggttccacacagggattagagcattttacaaatgaagtggtccttattgccaaattgcagcacaaaaatcttgttaggcttcttggttgctgcattcatggagatgaaaagctccttatttatgaatacttaccaaacaaaagcttggatcacttcctttttgatccagcaagtaaatttattcttgattggccaacaaggttcaagataatcaaaggagtagctagaggacttctttatctccaccaagattcaaggttaactataattcatagagatctcaaaacaagcaacatcttgttggatgcggatatgagtcctaagatatcggattttggtatggcaagaatctttggcggaaaccagcaagaagcaaatactaaccgagttgttggaacatacggttacatgtctcctgaatacgcaatggatggggtcttttcagtcaagtctgacatatatagctttggtgttatactcttggagattgtaagcggtttgaagattagcttacctcagctgatggattttcccaacttgttggcctatgcatggagattatggaaggatgataagaccatggatttggtggactcatccattgctgagagttgctcaaaaaacgaggtattacaaaataacagtagataa</cdnaseq>

Protein Sequence

<aaseq>MTQIINVPRSTLRSFWSSGLFGNNVNAKIFQSESNTPLESGGSI VLVGSLVLLVTVVLFWPGSFAVPGKSSCLACPKKKNKGQMNMAYLPVLIYLLLISFCK CDDQLTQVNRLISPSGKLVSKSGVFALGFFSPATSNQSLFLGIWYNNIPERTYVWVAN RDNPITTPSSAMLAISNSSDLVLSDSKGRTVWTTMANVTGGDGAYAVLLDSGNLVLRL SNNVTIWQSFDHPTDTILSNMKILLRYKEQVGMRLVAWKGLDDPTTGDFSCSGDPSSD LQVFVWHGTKPYYRSIVLDSVWVSGKAYGSSTSFMYQTYVNTQDEFYVIYTTSDGSPY MRIMLDYTGTFRLLSWNVNSSSWAIYSQRPAAIGDCDPYGSCGPFGYCDFTSVIPRCQ CPDGFEPNGSNSSSGCRRKQQLRCGEGNHFMTMPGMKLPDKFFYVQDRSFEECAAECS RNCSCTAYAYTNLTITGSPGTTASQSRCLLWVGELVDMARNNLGDNLYLRLADSPGHK KSRYVVKVVVPIIACVLMLTCIYLVWKWISKGEKRNNENQNRAMLGNFRASHEVYEQN QEFPCINFEDVVTATNNFSDSNMLGEGGFGKVYKGKLGGGKEIAVKRLSTGSTQGLEH FTNEVVLIAKLQHKNLVRLLGCCIHGDEKLLIYEYLPNKSLDHFLFDPASKFILDWPT RFKIIKGVARGLLYLHQDSRLTIIHRDLKTSNILLDADMSPKISDFGMARIFGGNQQE ANTNRVVGTYGYMSPEYAMDGVFSVKSDIYSFGVILLEIVSGLKISLPQLMDFPNLLA YAWRLWKDDKTMDLVDSSIAESCSKNEVLQNNSR</aaseq>

Gene Sequence

<dnaseqindica>4543..4566#4072..4149#3760..3907#3433..3670#3140..3350#2880..3061#2694..2795#1243..2551#572..654#1..124#atgacgcagatcatcaacgtgccgcgttcaactctcagatcattttggtcttctggcttatttggaaacaacgttaatgcaaaaatcttccaatctgaatccaatacgcctctggagtctggaggttagaagatcaagaaggaattttgcgtctcgcctgactgctgatttctatttttttttgagcggaacatatattccatttacttattactgatacggccaaatcgccctgattgctgatttctttgtttcataccggtttgataatacttttcgttttggataagggcacggtctctaaaaaacaactttgaccattatttttcattataatatgtataaaattgttaacaaatatacgattatattaaagtactttttaagactaatctatacatatagtcaccatatttaaaagacaaatattttaaaaatgatttataatcaaagattataaagtttgactacacccttatccaaaacgacaagtattatcagcctggagggagtagtaaactttcagaaattaactagagatttctccttttgctgtaaccgtttttaacaggatctattgtacttgttggcagccttgttttattagttacagttgtactgttctggccaggttcttttgccgtcccgggaaaggtaaaaaaggaaaaaggaaaaaaaaataacagtataacggtttcgctctcgttgattttctcgtcgtatccgaacttcgttttcgctttgcgcgtgcatcctgatctggaaggacagaaatgtcttggccgtatgtttgctttcttcggtccaaccatgctctaagactatgggaaatcatctagtatgcatctgataattggatacatatgctctatttcttcacatttacatttttgaaggcaactaggaaacagaagaacaagacctaatgagatttagagccaaagtatggaaggaaaaggaagatgaatgcaagaaccttggtggttggtgtggcaggaacggaacagaagaatttccaacaccaaagccagagggagaagcaaaagtagctgcccaattgtgcaggagttaaatcagatagagcttagcagagcttagcctggtaatttcaagagctacgagagcagttctcctttttatcagatgtacatcttcttttccagttgcctcgcctctcctcgggctcttcttttgtaagactctgtgtctttttaatcgcataatctaattttgattttgcagagctcctgccttgcttgtccaaaaaagaagaacaagggccagatgaatatggcctacctcccagttctcatctacttgctgctcatctctttctgcaaatgcgatgatcagctgacacaggtaaatcgattgatctcccccagcggcaagctcgtctccaagagcggcgtctttgcactcggtttcttctccccagccacttccaaccagagcttattcctcggcatatggtataacaacatcccagagcgaacatacgtttgggttgctaaccgtgacaacccaatcaccacaccttcatcagcgatgctcgccatcagcaatagttctgaccttgtattgtcagattccaaaggtcgcaccgtctggacgacaatggcaaatgtcaccggaggtgacggagcttatgcagtgctgctcgactcaggaaacttggttctccggctgtcaaacaatgtaaccatatggcaaagtttcgatcacccaactgacaccattctgtcgaacatgaagattctgctgaggtacaaggagcaagtaggcatgcggcttgtagcttggaagggccttgatgatccaacaacgggggacttctcatgcagcggagaccccagctcagaccttcaggtcttcgtctggcacgggaccaagccatattaccgctccattgtgcttgacagtgtgtgggtgtccggcaaagcatatggcagcagcacctccttcatgtaccaaacatatgtaaacacacaggatgagttctatgttatctacaccacctctgatggctcaccatacatgcgcatcatgcttgactacacgggcaccttcaggctcctgagttggaacgtcaactcgtcatcatgggcaatctattctcaacgcccagcagccattggcgattgtgatccctacggctcgtgtggcccattcggttactgtgacttcacgtcggtcatcccaagatgccagtgcccggatggatttgagcctaacggctccaactcttcaagtggatgccggagaaagcaacaattaagatgtggagaagggaaccatttcatgaccatgcctggaatgaagctccctgacaagttcttttatgtccaggacagaagctttgaggagtgcgcggctgagtgtagccgaaactgctcatgcacggcctatgcttacaccaacttgaccataaccggctctcccggtaccacagccagccagtcaaggtgcttgctttgggttggtgagcttgttgacatggcgaggaacaatcttggtgacaacttgtacctccggttggccgactctccaggtatgcccaccttttatccctgtggtgacaaatgacaataaagatcttagatagcctgaacatccaattaaaagcaacatccatgcatatacctgcaatctatggttagaaattctgaaagcttcttcatttctcttaataggtcataaaaagagcaggtatgtagtcaaggttgtagtccccattatagcatgcgtgctaatgctcacgtgcatataccttgtctggaaatggatatcaaaaggtacagcaggagccaatactcaacaccgactcatatcatgttttcctcctgtaattgtacttatgatattgatgttcctattaggtgaaaagagaaataatgaaaatcagaatagagcgatgctaggaaactttagagcttctcatgaagtatatgagcaaaatcaggaattcccatgtattaattttgaagatgttgtcactgcaacaaacaattttagtgattcaaatatgcttggagaaggaggtttcggcaaggtttataaggtaacaatttacacagacaaacgcaacagtggagaaacctacaacattttatcatgctaaaatgatgttattatacagggcaagttgggaggtggcaaagaaattgcggttaaaagactcagtacaggttccacacagggattagagcattttacaaatgaagtggtccttattgccaaattgcagcacaaaaatcttgttaggcttcttggttgctgcattcatggagatgaaaagctccttatttatgaatacttaccaaacaaaagcttggatcacttcctttttggtactgttcagaaacttaccacatgatccagatataattggctgaatgcttactaattagcattattcaccattgttgatagatccagcaagtaaatttattcttgattggccaacaaggttcaagataatcaaaggagtagctagaggacttctttatctccaccaagattcaaggttaactataattcatagagatctcaaaacaagcaacatcttgttggatgcggatatgagtcctaagatatcggattttggtatggcaagaatctttggcggaaaccagcaagaagcaaatactaaccgagttgttggaacatagtgagtgatttatgtgttagtgtttagaatgatatttatttcctttcctgaaacaatatttgttacttattgctaaaactgttaagcagcggttacatgtctcctgaatacgcaatggatggggtcttttcagtcaagtctgacatatatagctttggtgttatactcttggagattgtaagcggtttgaagattagcttacctcagctgatggattttcccaacttgttggcctatgtaagtacggtgaaatgatctatcttcatataatgcaaactttttttcttttttttttgccgggtcggccgaaggaaccggcgaccaaatttcattaagattgggaggaatataatgcaaactaactgtactgattttatatggaccctattctattggttcaggcatggagattatggaaggatgataagaccatggatttggtggactcatccattgctgagagttgctcaaaaaacgaggttttactatgtatccacataggcctgttgtgcgtgcaagataatccaaatagtaggccactcatgtcttctgttgttttcatgttggagaacgaacaggcagcacttcccgctccaatacaacctgtgtattttgcacatagggcctctgaaaccaaacaaacaggggaaaataccagcagctctaataataacatgagtctcacggtattagagggacggtagatgtttatgttacctattttctgcatagaaagcatttagattttaccacttctgtaattagtttgttcttttccataaaatattagaaacaaagggcagatgttacattttttttggatgagttttttcttttatcatggcccttgagatggtatttttaatgtgcaggtattacaaaataacagtagataa</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0633300, RefSeq:Os04g0633300