Os04g0637000

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Revision as of 11:30, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0637000| Description = Similar to Basic leucine zipper protein (Liguleless2)| Version = NM_001187180.1 GI:297723490 GeneID:9270267| Length ...")
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Gene Name

Os04g0637000

Description

Similar to Basic leucine zipper protein (Liguleless2)

Version

NM_001187180.1 GI:297723490 GeneID:9270267

Length

8691 bp

Definition

Oryza sativa Japonica Group Os04g0637000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:32801906..32810596

Sequence Coding Region

32805049..32805101,32808116..32808305,32808434..32808508,32808694..32808753,32808865..32808954

Expression

GEO Profiles:Os04g0637000

Genome Context

<gbrowseImage1> name=NC_008397:32801906..32810596 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:32801906..32810596 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagctttaccctggctatcttgaagaccattttaacatccacaagcttagtatcagcagcgcctctcctccggagtacatgacctcggcgtcgacgcagttcgcggcaccggtcagaatgggggcgtacgaccggcctccgccagttggcatgtggagtcacgagcagttcaaggttgacaacggccaggccacgagtgcatccacgatcatggaggcagagatgaaatttgagaataggctagaagaaattccccaagtagttctggaggaagggagaaatgttgatcaggaggcaagcaagccgccagacaaggtcctcagaagacttgcacaaaacagagaggctgcacggaaaagccgcctgcggaaaaaggcttatatccaacagctggagacaagccggttgaaactagcgcagttagagcaagagcttcaacgggccaggcagcaggtacacggataa</cdnaseq>

Protein Sequence

<aaseq>MELYPGYLEDHFNIHKLSISSASPPEYMTSASTQFAAPVRMGAY DRPPPVGMWSHEQFKVDNGQATSASTIMEAEMKFENRLEEIPQVVLEEGRNVDQEASK PPDKVLRRLAQNREAARKSRLRKKAYIQQLETSRLKLAQLEQELQRARQQVHG</aaseq>

Gene Sequence

<dnaseqindica>3144..3196#6211..6400#6529..6603#6789..6848#6960..7049#cgctgttcctgcctacgagcgagagagagaatctcatctcgatgctgaacaagtaattttcccggttctgaatccgttcaatcatccaggaaaaatgtccggaattccaggtaagtaattttctctaatttcttatcctgatcagatttatagtgagattcaggggaatagagatctgctggctttttcatcggaaaatttcgctgaattgcgttcgcgaaaaaaaaaattcgctgaatttcgtacagcggatgatgaggattgaaaaggttgggtgctgcaaaagcgagagggggtggggaaagaagggcgcaagaccaatcaagccaaaaggaaggcaatgccacgaaggaatcggctagggttagccatccgcagccacagccgaggggttagcgggtttagccctagcccaccatgactgttgcggcgcatttcatctcctcctcgccgaggggaagaaaaaaccgcatcgcgacggcgacatcgggggggcctctttaataatgcttccatcagagagcatggccatggccatggccacgaccttgatcttgaggtttgggggtttgcgaatttgcaacattaacaataacgcatcattgctgcccctgcctgattaccacactaattaatttctcttatagtgctttatcttatctcttcttctaactttaggttagccggggtcgaaaggttcttcttcttttgcgcctttatggcaaaggggaattcttcgtcgtcacgcaccaagcgttacgcaattcgcaaaagaggaggtgccccactgcactcatacttctattatatattcctcggtgttttatttaatttgtgttagttcagagtattatatgtgtggtgtaatttcttgctgcttttgggaaagatatggatcatggacaatgattgccaaatagtgtaacgacttagacctagtagttagttgtcagacactgttatgcgaaaatcgattgtttctttgaggtgtatactttgatattgactgaatttcatggtacttcacctccatgtttacttgtgtaagttcttgctaggcgtgtctacttacttgtgttgagaaatgaaatagctagatgcttagcatgatctgttcctcttgagaacagaaaccctcaagatcatatagctaattaaagaaacatgatatgggcacaccaccaaaaaagcaaccaggaaggaagacaagtagcataggatgagggaaaaaaaagaaaggtgtaaagggggcatctttttgggaaggttgaggaggtttagtgatcaaggagggataccccagaaatgggaagttccaccgagcagccaagttgctgaatctagtgatgtcccctaattgcatcatggaatctaacatgagccccattatagggtcatcgtattacctcgctcttaataaaattggttggatgatcttttcggctgcctagctaacaatctgaatattagttaaatcctgcttgccttcatgaggcaacaggggcactctagcaatgggattaagtcctgataagttcagtttacttgtgtggtatttctactgtgcctgtaataactggagtactaactagtagtgtttacaactttattatgtccccttgggtgacaaactaaatctcttaactatgctcagttatggcatatgagttagtgttgccttgtctgacgagacttccttttctgaaaccaaatctccttgcatgcagctttctgcctaatcagtatttgacagtggatgtggtgtatttaaccatctttgcttggcggtttcgtaataaaaatgtgtgtggaaactgcttcctggcatgcttttgtagggcactgtcaatcacctgggttatctgaaactatcgatttttgctagtgtgtcgatctatcgaagtaaccaaggctgtgcctcagacttaaaagcgtgctacttttttacacctgaaagttaccatctttcttctctgtcagaatcatgtgcagactttttctggctctactagttaggtggtgagggatgtgtgtatgtattcctgtgtgcaagcaacttctcacatatccaactagtttacgaaaagaataattagtgcatcctaagcatgaggcccaggtgataatattagatactaaaagctcttcatacttggcttcttcttttgaagggagggcagctgtggctctttatataaccctgcatcacttcttctggctaactggtgtcctttggagctgagctacatagcacatccgtggagtctcttgtgctaagcaatttaccgttccagtgctctactttgtaggccatccatattagacggaagaactttatcaggtactaagtttctctggatatttgattcactgattctgtttttattatgtgtgtcatcttggtgaagaacaagttaagtcctactctttggctttcactatatgtgctgttgtgctagaattaatgataacttgcatttctatagggtttattacctgattgacaaagaaaaaacatcaaaccacagcttgcctttcatatcttgtttatcttttcattcctagtagagaggaagtaggaaaatatgtttcctgttaacctaaccagcagagtcatcaggtgggattttctccttcggtgatgactcgtttagtgaaagaaggacatgatttttcttggggactctgaaaaattttagcttctgaataagtgggctatctgataattctttagttcttccaagacatcatagctaagggtttttgattttgtctcgtcatgtctatcgttgtttcttttcttatttgaatgggactgcaaagtgctggagtggtactaaaactgatcatattcgcttctccagtaagtctggaatagcactcgtaaaccatatgttcattataatctttacactgttggaataaagttccttgagcgaaaactttttttttccctgagaacatatctttcttagagtattttctaagaccatatcttcttccatgttcatgcgacactggacactctagagcaactgcataactttcagtattgtttatgaattatgcagctaatattcccactctggcacatgaatttatgcagtattattattggaggagaccaattcaagaatgatataatggagctttaccctggctatcttgaagaccattttaacatccacaagcttaggtgtgtattcctataaccgaatcccttattatttctgaattttctctatttaatatttagcaaatggaaaatgacaattagaattgctgcatttttacgttgaagttgaacaagctgtcaaacgaaagagagttagcacctatgatgccatttacgcattctagtattgcaatttgcattagattttcattagttgtggcacaacatgatgtaaaccgaatagatatttattacagcaagtggactagtgctgtggtgcagcgaaagtgagatcatgtcagctaggacagacaaaggtgaagcctacaataataatacgctggctaccagatttcagaatcaccaattaagatagaagtgcgacatcaactgataccttgtgctaattctctgaaagtataacatagatgctctgctttgttctcttgtttagacaaccacatccacccatttggaacaaatcaaaaggtttcctcatagcccgtaggttactgcgaatttacactgcacatagctgtttctaaatagggcacggcaatagccgtgaactctgcgtcttgcacatagctgtttctaaatagggcacggcaatagccatgaactatgcgtcagatccttgttgtagaggatcctgatagttgactcctcaacggaaaaataaaagacgaggtcctaatttggcaaaatagtgcaggggcactagagaaaaaaaaggcattttgcatcatctccaacccagtttagggcaaaggagaggctactgcttggccctccccaagtgatgttgcgggtctgaagaaagtggtgagcgatgaccaatgcatcaccattcaccactaactaaccaatcaaagtttcataagaaaaagaaaaaaagattagccaatctagcattccttttttcttccttgacatcatctgtcctttcatgttccccagcagtgcactgtgcactactgtctacagcaaacacagtttccttaaattcctctaaaaaaaatgttacatagttatttcaggcttcagtctaaccagaaacttgagcttatttctgtgccattagagattagagccaatccctccaaattggttagaataaacatataggtagtaaatacatatatgatgcccatatatgcgggagtgaatgcgacaaaatgaggcgaccattatacagcaatgcacactgctattcctgataagttgggacatacacatagtggggtttgagctatccacggtggtcggaggtgttgcagggtgagcagacaaaacgaagcccaccggttttgcattttcgtgggcgctggataggccaacctcactcgcttttagcgcaaaagcaaagtggagccgccaataattgagcgacacattaccaaggtccctccagtgtgctggcccggcaaatcccccactacgtgtgggagtgagtgagcttcttctcctgctgctgctgctttgcccgttcgtgcagcacgtaacatcatcctcacaaagacaaagatgggttccatggacgatggatcatgatcgattgatcatagatgctgcgtcatcatgctttctgtgcttgggattagatcaccagaatcttagttacaattacagacatcccatggagttcagttcaggttcactggttcaggacttggttgacatcgaaggcacaggattgactatacttcatccgtttcacaatgtaagtcattgtagcatttaccacatttataatgatattaataaatctagaatgatatatatgtctagattcattaacatcaatatgaatatagaaaatgctataatgacttgcactatgaaacagagggaatagcttagtagtagtatatgaggatgatgactgagacagacagccgaccccacaaaaaaagagtgggacccacgaagcaaatctgagtcactgaggagaagcagcagctaccaggtggcaacttgtccgtggagcagcaagggaagcgagcgagtcactctcagcgtcacgcaccgcgcctttgcaaaagctaaagctcgcagcggcagcgccgccaccactcgcactctgctttgcttccttcgtcacactgccggcactgcactgcctgggaggctgggattccagattccaggttccactcgaactcaagcaagcatccagccactcgcgggcaggcacacgcagtccaggctgctagctagtactcagattcttctcgtctctactaggactaggcacaggttcccgcatcatttctaacaatctagctgcaactagcttgaagctggcaactgattcgtactccctccgtcccaaaaaaaaaaactaaacctagaagagaatgtgacattttctagtacaacgaatctggataaatggttgtccagatttattgtactaagaaatattagatgtcacatccttgcctaggttaagtttttttgggatagagggagtattaattatccctctgatcacagcctctttgtagtgagagagactgttactgttactgttgggctgaagatgactgtgctactgatcggacctgggctgttgagttagtgatcattctgacaattagactcgtacacatgataagaattttttttcttccctgatggaagtgcgctcgcaaagtgaacgtcatctcagccttcagatcaagcttgattcatcatcatttgttgcgcatgttgtcaacctctgcatgccactttggcaaagtgctctaatccccagtgaaaatggcgccttttgatcccccaagcttttgtggagatgcatgcggccgcacttggggagagcatatttgcctttgcatacagctagctatctctaacctttgtgctgtgctgagcacattccatttcccagtttaaaagaatcaccttttttttcttcttcctttcctccctagcttgttgcagctgctgctccaagtagtgtgtggcgatccttagttttttgcacttagggagggtgcactctgctgatcctcttttacttggttcagtatcagcagcgcctctcctccggagtacatgacctcggcgtcgacgcagttcgcggcaccggtcagaatgggggcgtacgaccggcctccgccagttggcatgtggagtcacgagcagttcaaggttgacaacggccaggccacgagtgcatccacgatcatggaggcagagatgaaatttgagaatagggtgaggaacacatccgctttgatttaattttgtttcctctagtattttgagtagctatgagctgtggcttctactaattgcctgttgaatgatcgggtgtttaatactcattttgatgagatttgcagctagaagaaattccccaagtagttctggaggaagggagaaatgttgatcaggaggcaagcaagccgccagacaaggtgagcatcacacagtacaatccaaccatctctgctctgctccattatatgaaaccgtgtaattattactcttttccttttcttaaaagatgcagtagagaaattcccaaaactcacagtccatttcatatgttaaattcagtttggtcttgcgagataaaataattttctgcttatttattcaggtcctcagaagacttgcacaaaacagagaggctgcacggaaaagccgcctgcggaaaaaggtaaaatgacaagtacttaactactaacatgctgtcaccatgctagattgtagctttcccatttttgaaaaacaaaatcctcattatcggcatgattatggtgttccataggcttatatccaacagctggagacaagccggttgaaactagcgcagttagagcaagagcttcaacgggccaggcagcaggtacacggataacaatttgttgtgcagccacttcagcttacacttgtgtcactgactccattgcaaatttgcaactgctctgatgcaggctgtgtatgcaaatgggagccttcgagaaccaaatcttggatttacaggaccgatcgatccaggttaggttttttgttgtgccgctctttctgatcacaatgttcagcacagatttaacatttttgttcattctaattaccagcttatgtggtttcatcatattacgtacatgcaggtgccttaggttttgagattaagtacagccattgggtggacgagcagaatcgcaacactggtgagctgaggaatgcgctgctgcaggggcagacgacggaccaggacctggagctcaagttgctcgtcgaggctgggctcgacaactacaaccgcctcttcgagatgaaagaggaagccgccaactccgacgtgttctacatcatgtcgggcatgtggaagacccccaccgagcggttcttcctgtggatcggtgggttccggccatcggaggttctcaaggtagctaatcgatctgcactgcacacatgtactccagagcttcaaaaccactagtgccagttgattttttttacatgacatgatggcaactctctctctctctctcgttgttgcttctgctatcagaatttgagaccgcagctggagcctctgacggacaagcaggtcgtggaagtgggcggcctgcagcaaacctcgatgcaggtcgaggacgccctctcgcagggcatggacaagctgaagcagacgatcgcggactccctgacggcggccgacccgttcgactcccccgaggcctacatggtgcacatggccaacgccgtggagcagctcagatccctcgtccagttcgttacccaggtaaccaaaccaaaccaaaaccaaccgccaaaaactccgatcgcctcattgtctcattcatcatggcatctgggacttgtgtgtgcaggcagatcatctccggcagcagacgctgcaggagatgcacaggatcctgacgacgcggcaggcggcgagggggctcctcgcgctgggggactacttccagcgcttccgagcgctgagctcgctatgggcagctcgcccgcgcgattcagggataagctaaacaccgtaatatggtcacggtagaagctacagatatcagtagcaattcgtcgtgttagttcgctacttcagtgtcaggtcaatggccagtgaaggatgaagagatctttctacctgtgcttcgtcgaagaagaacaactcgtgatcgactttctgcagcgccgctgcaactgcaatccaaggaatggtgtatgttcgcctgctgagatgaagaaataaccaaaattaactttggtctttctgatgtgggcacaagagaagatgtaatataatatgtaaatatatacatgttttgggtatcattgccagaggcctctacagctggttttatagacatgtgatgtaattatctgtaactagtgttgctcggttcctcctccctagtacggcagacataggtgacatactgccattgtattgtatgggagaacaaattagttcacttgagaactagaaaaacatgcagtgatgttttgctgaagttgaagtagtttctgccacc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0637000, RefSeq:Os04g0637000