Os04g0637400

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Revision as of 11:30, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0637400| Description = Similar to PolI-like DNA polymerase| Version = NM_001060559.1 GI:115460847 GeneID:4337150| Length = 4062 bp| Defini...")
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Gene Name

Os04g0637400

Description

Similar to PolI-like DNA polymerase

Version

NM_001060559.1 GI:115460847 GeneID:4337150

Length

4062 bp

Definition

Oryza sativa Japonica Group Os04g0637400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:32818377..32822438

Sequence Coding Region

32818378..32818694,32819184..32819607,32819728..32819823,32820546..32820638,32820730..32820924
,32821007..32821099,32821347..32821559,32821644..32821733,32821868..32822029

Expression

GEO Profiles:Os04g0637400

Genome Context

<gbrowseImage1> name=NC_008397:32818377..32822438 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:32818377..32822438 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>cgactttatgaaagtttgaaaagcaagctggaaaaaaagcactggacttttgatggttgccctagaggttcaatgtatgatttctacgaggagtattggcgtccttttggtgcccttcttgtcaagatggaaacagctggaatgctagtcgaccgtggttacctttcagaaattgaaaaggttgctgttgcacagcgaaaactagctgcggataaatttcggaaatgggcatctaaatattgtcctgatgcaaaatacatgaacgtgaacagtgatactcagattcgccaactgttctttggtggtatagagaatagatgcaaacctggtgaaactttgccaaagagtagaactattaaagtaccaaatgatggaagccttattgcagagggcaagaaaactccaaagtattgtactattgaacttttcagcattgtggaagatctgaaaactgatctatttactgcaagtggctggccttcagtaagtggagatgcattgagaagtttggctggtaaactgccaactgatcttgtttacacaacagatgatgtagaggatgatgacagtggtgattcagaaatttctgagcatgatctaaacgacactgcctcttatggaactgcatatgaagcatttggaggaggaaagaaaggaaaggaagcatgccatgccattgcggctctctgtgagatttgttctattgactcgttgatatccaactttattcttcccttacaggggaatcatatatcatgtgacgaggggcggatccactgttcattaaatataaatacagaaacagggcgtctgtcagcaagaacaccaaatttacagaatcaacctgcactggaaaaggatcggtataaaatccgtcaagcctttgttgcagctccagggaactctctcatcgttgctgattatggtcagctggagctcaggatcttggcacatcttgctagttgtaaaagcatgttagatgctttcaaagctggtggtgacttccattccaggacagctatgaacatgtaccagcatatccgtgatgctgttgaagaaaagaaagtacttcttgaatggcatcctcaacctggccaagagaaacctcctgtgcccttgttgaaggatgcctttggtgctgagaggcggaaagctaaaatgcttaatttctccattgcatatggaaaaacacctgttgggcttgctcgagattggaaggtctctgtcaaggaagcaaaggataccctgaaactctggtacagggatagaaaagaggttttagcttggcaaatgaaacaaaaagaattagcgcaggagaagtgtgaagtttacactttgctcgggcggtcgcgccgctttcctaacatggctcatgcaacttctggtcaaaggggtcacattgagcgagctgctatcaatgcaccagtacagggcagcgcagcagatgttgctatgtgtgctatgctcgagatagatcggaatgctcgtcttaaggaactcggttggaggcttctcttgcaggtgcacgatgaagtgatactggaagggcctacggaatctgccgatctggccaagtcgattgtggttgaatgcatgtccaagcccttctacggcaccaacatcttgaatgttgaactggctgttgatgccaagtgtgcgcagaattggtatgcagccaagtag</cdnaseq>

Protein Sequence

<aaseq>RLYESLKSKLEKKHWTFDGCPRGSMYDFYEEYWRPFGALLVKME TAGMLVDRGYLSEIEKVAVAQRKLAADKFRKWASKYCPDAKYMNVNSDTQIRQLFFGG IENRCKPGETLPKSRTIKVPNDGSLIAEGKKTPKYCTIELFSIVEDLKTDLFTASGWP SVSGDALRSLAGKLPTDLVYTTDDVEDDDSGDSEISEHDLNDTASYGTAYEAFGGGKK GKEACHAIAALCEICSIDSLISNFILPLQGNHISCDEGRIHCSLNINTETGRLSARTP NLQNQPALEKDRYKIRQAFVAAPGNSLIVADYGQLELRILAHLASCKSMLDAFKAGGD FHSRTAMNMYQHIRDAVEEKKVLLEWHPQPGQEKPPVPLLKDAFGAERRKAKMLNFSI AYGKTPVGLARDWKVSVKEAKDTLKLWYRDRKEVLAWQMKQKELAQEKCEVYTLLGRS RRFPNMAHATSGQRGHIERAAINAPVQGSAADVAMCAMLEIDRNARLKELGWRLLLQV HDEVILEGPTESADLAKSIVVECMSKPFYGTNILNVELAVDAKCAQNWYAAK</aaseq>

Gene Sequence

<dnaseqindica>2..318#808..1231#1352..1447#2170..2262#2354..2548#2631..2723#2971..3183#3268..3357#3492..3653#acgactttatgaaagtttgaaaagcaagctggaaaaaaagcactggacttttgatggttgccctagaggttcaatgtatgatttctacgaggagtattggcgtccttttggtgcccttcttgtcaagatggaaacagctggaatgctagtcgaccgtggttacctttcagaaattgaaaaggttgctgttgcacagcgaaaactagctgcggataaatttcggaaatgggcatctaaatattgtcctgatgcaaaatacatgaacgtgaacagtgatactcagattcgccaactgttctttggtggtatagagaataggtacaaccctcagtctgctgcagtctcttactaaatacatgtttttggtccttgtatacataattctatgcattcttatccaggacatccactaggttagatggtaattatgatagcaaactctaaatatgtctatattgtagaaggtgaccttgcttagcaaatcaacttcatatattgagcttgcatgaataattccttctattttaaaataaaacagtaccctgtgttgtgtttactgaatgcagaacaaaaaaaaaaagggagcagatttcagttcacctactattctagaaagtagaaacttttgtagaaagtagaaacttttgtagttcatatgttttgggtcttggattgtaactaggtataatatgtgtttccatgtatcaatgaaacaaaagagttaaatggaaccttctgtccttttcttttttatctcttgtagacatttcttgcacagaagttttgatgctcttaatatatgtgcagatgcaaacctggtgaaactttgccaaagagtagaactattaaagtaccaaatgatggaagccttattgcagagggcaagaaaactccaaagtattgtactattgaacttttcagcattgtggaagatctgaaaactgatctatttactgcaagtggctggccttcagtaagtggagatgcattgagaagtttggctggtaaactgccaactgatcttgtttacacaacagatgatgtagaggatgatgacagtggtgattcagaaatttctgagcatgatctaaacgacactgcctcttatggaactgcatatgaagcatttggaggaggaaagaaaggaaaggaagcatgccatgccattgcggctctctgtgagatttgttctattgactcgttgatatccaactttattcttcccttacaggtgagcagtgagctgaccccatctgtagcagttaggcttgagtggctaccatcaactaccataaccttaagctatatgtccagttcttaatgttatttatctcctattactttttgataggggaatcatatatcatgtgacgaggggcggatccactgttcattaaatataaatacagaaacagggcgtctgtcagcaagaacaccaaatttacaggtgacttttcatttatgtttttttaaataaataaataaataagggtattatgaagctgagaaactaatagttatcaaagaattttcttcctaacttcaatcataattcactcttgtataaacaaatcaatgggttcatgtatggattttaaaatctgctaatgccaggctgtggattgttttcacagtccaatatacgtgaattgggtgaacttagtgaaaactaaccgaaattttgatctgtctaaaatggttattaaagcactggtctacacatgtacaccatgcgggttttatttgtttgtgtgtcttaacacgcatacatactgtaactgctgagagcgaagtactgtgatggtttcttagacattgatgcattcatcagttaacataatttacttaatgaataaaatgagacaagctaagctaccagtggtcattgatccatttttgctgctaagtcgatgaatgggtgtaccaaatattaattttgaaactaaggacagatttttcaatgaatttaatgttaacgatgaataatctaatctttttttcttgcattatttgatattttctagatgggaatcgtttgttcgaaatgctgtaaaatatgggccagtttatttaggtggtgtagtaatcaccatattgtatcatattgtgagttgtgatatcatcgcccaaataatatattgaactctggatctaatttctgcattgtagaatcaacctgcactggaaaaggatcggtataaaatccgtcaagcctttgttgcagctccagggaactctctcatcgttgctgattatggtcaggtatgttgtatgttggctgatgctcaacaaagttccagaataattttgcactagcacaagtgaataaagggttttttttttttctgtttagctggagctcaggatcttggcacatcttgctagttgtaaaagcatgttagatgctttcaaagctggtggtgacttccattccaggacagctatgaacatgtaccagcatatccgtgatgctgttgaagaaaagaaagtacttcttgaatggcatcctcaacctggccaagagaaacctcctgtgcccttgttgaaggtaccacagctccaatagtatttttaagagtcatgtatttatgcagaatcaaataaagttatatgttctatttgtgatttaggatgcctttggtgctgagaggcggaaagctaaaatgcttaatttctccattgcatatggaaaaacacctgttgggcttgctcgagattggaaggtatgaacttgttatgaacatacctgattctttactagcttaagtacgcacttcacttgttacccgctttgactgaccatctgggaaccataaacagcttgcacatgaccattagtcatacttgttagatttactgttgaagcattgtacaactgctctcctattaatgtaaaaagatgcagtcccctgtactttccgtcgctgttttcaaagatcactgcacatctataatttcttcccttggcaggtctctgtcaaggaagcaaaggataccctgaaactctggtacagggatagaaaagaggttttagcttggcaaatgaaacaaaaagaattagcgcaggagaagtgtgaagtttacactttgctcgggcggtcgcgccgctttcctaacatggctcatgcaacttctggtcaaaggggtcacattgagcgagctgctatcaatgcaccagtacaggtcattaccgtctatgacaactcaaaagttgtgcttggtagtgtctcttctatgctgaaattgtagtgttttgtaacttcacagggcagcgcagcagatgttgctatgtgtgctatgctcgagatagatcggaatgctcgtcttaaggaactcggttggaggcttctcttgcaggtacaaaacaattaggcatgattaatggctagttgtggatcttaaattgtttcttgataggttcgcagtattatctggtttccctttatccgttaggtgtaacaccttgcagaactgatagctccgtctttcaggtgcacgatgaagtgatactggaagggcctacggaatctgccgatctggccaagtcgattgtggttgaatgcatgtccaagcccttctacggcaccaacatcttgaatgttgaactggctgttgatgccaagtgtgcgcagaattggtatgcagccaagtaggttgccatactcttccccaattaactcctaaggctgcatagttgcatctcgggagtgcttcaaactcaacgatgaaatatgttctcagctggtatgagctgccagaacagaggtttgccctggtgtccgggaggcatgcataaccattcggctaaccagggcaatgagcagtctgcagcgaaggcactgtacaatgtaggctgaatagcttgacttccacattcttccaagtaggaatgtcatttttgtgtcacgtgtagtaatctggagactggactcttggagggaagtaggaaaaactaggcatgcgttgtttataagatttgtttagcatgctgatgtagtattaggttagctgaccaattctgcttatgtctgactctgctactacacaccgcagcttgtttga</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0637400, RefSeq:Os04g0637400