Os04g0645200

From RiceWiki
Revision as of 11:31, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0645200| Description = VQ domain containing protein| Version = NM_001060599.1 GI:115460927 GeneID:4337193| Length = 884 bp| Definition = O...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os04g0645200

Description

VQ domain containing protein

Version

NM_001060599.1 GI:115460927 GeneID:4337193

Length

884 bp

Definition

Oryza sativa Japonica Group Os04g0645200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:33250675..33251558

Sequence Coding Region

33250805..33251413

Expression

GEO Profiles:Os04g0645200

Genome Context

<gbrowseImage1> name=NC_008397:33250675..33251558 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:33250675..33251558 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcggcgtctcatgcgccgaggtcggtggtggtgagttcgtcgtcgcctgcggcggcgattgccacggccggctgcgtggtggacacgaacacgacgttcgtgcaggccgacccggcgacgttccgggcgctcgtgcagaagctgacgggcgcgccggggagcggcggcagcaagccggcgccggcggcgccggtgatgaggaggccgaagctgcaggagaggcggcgcgcggcgccggcgaggctggagctcgcgcggccgcagccgctgtactacagccaccaccaccacaggctgatgcactcgccggtgtcgcccatggactacgcctacgtgatggcctcctcctcctcgtcgtcgtcgtcctcgctgccgtcgtcgtcgtcctcgctgtcgccgtcgccgccggcgtcgtcgtcgtcgtgcggggtggtggtgataaccaaggaggaggaggagagggaggagaaggccatcgcctccaaggggttctacctgcactcgtcgccgaggagcggcggcgccggcgacggcgagaggcccaagctgctgccgctgttccccgtccactcccccaggagctcctcctttgccagatcttaa</cdnaseq>

Protein Sequence

<aaseq>MAAASHAPRSVVVSSSSPAAAIATAGCVVDTNTTFVQADPATFR ALVQKLTGAPGSGGSKPAPAAPVMRRPKLQERRRAAPARLELARPQPLYYSHHHHRLM HSPVSPMDYAYVMASSSSSSSSSLPSSSSSLSPSPPASSSSCGVVVITKEEEEREEKA IASKGFYLHSSPRSGGAGDGERPKLLPLFPVHSPRSSSFARS</aaseq>

Gene Sequence

<dnaseqindica>146..754#acttccattctcttcacaccatcacatgtagtgcgtgtactcctagagcttagctagagctagcttcctctcgttgatagcttgatacatctctctcgattcgtagagagtttggttggttgatagctagctcgacggcgcggccatggcggcggcgtctcatgcgccgaggtcggtggtggtgagttcgtcgtcgcctgcggcggcgattgccacggccggctgcgtggtggacacgaacacgacgttcgtgcaggccgacccggcgacgttccgggcgctcgtgcagaagctgacgggcgcgccggggagcggcggcagcaagccggcgccggcggcgccggtgatgaggaggccgaagctgcaggagaggcggcgcgcggcgccggcgaggctggagctcgcgcggccgcagccgctgtactacagccaccaccaccacaggctgatgcactcgccggtgtcgcccatggactacgcctacgtgatggcctcctcctcctcgtcgtcgtcgtcctcgctgccgtcgtcgtcgtcctcgctgtcgccgtcgccgccggcgtcgtcgtcgtcgtgcggggtggtggtgataaccaaggaggaggaggagagggaggagaaggccatcgcctccaaggggttctacctgcactcgtcgccgaggagcggcggcgccggcgacggcgagaggcccaagctgctgccgctgttccccgtccactcccccaggagctcctcctttgccagatcttaatttattaattaatcagccttaattatcttgttaatcccggcgatgccatgcttaattaatcctttgtagcaccaagctatctatctgtattaatcaattagatgatcaatatatcaatccatgcaacatc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0645200, RefSeq:Os04g0645200