Os04g0657300

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Revision as of 11:32, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0657300| Description = Similar to Farnesyl diphosphate synthase (Fragment)| Version = NM_001060657.1 GI:115461043 GeneID:4337261| Length = ...")
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Gene Name

Os04g0657300

Description

Similar to Farnesyl diphosphate synthase (Fragment)

Version

NM_001060657.1 GI:115461043 GeneID:4337261

Length

3227 bp

Definition

Oryza sativa Japonica Group Os04g0657300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:33923631..33926857

Sequence Coding Region

33923631..33923759,33923951..33924022,33924141..33924230,33924310..33924354,33924429..33924524
,33924641..33924692,33924780..33924868,33924962..33925078,33925184..33925270
,33925382..33925497,33925590..33925614,33926552..33926857

Expression

GEO Profiles:Os04g0657300

Genome Context

<gbrowseImage1> name=NC_008397:33923631..33926857 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:33923631..33926857 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggggcgctggcggcgtcgatcgcgtcgcacctgccgtcgggggtgtcggcggcggtggcggcgctggcggcgagcccgggggaggtggtgaggagggcggcggggctggaggacgagctccgggagcttctccggctgaacggcggcgggcgcgggcggggcggcgcggcggcggagcaggggcagggcgagcagacgagggacaggttcgtgcgcgcgtacgagcggctcaagagtgagctgctcaacgaccgagccttcaacttcgacttcactgaggagaccaggcagtgggtcgccaagatgatggactacaacgtgccaggagggaaactgaaccgtgggctctcggtggtggacagctacatgctgctgagacaaggaaccgaggttgacgacgaggatttctacctcgcctgcgtgctcggttggtgcgtcgaatggctgcaagcgtcagcccttgtgctcgatgacatcacggacaacgcctacacgaggcgagataacctctgctggtacaagctaccaacggttggcatgtctgctataaacgatggtgtgctgctcaagtgccatgtccaggcaatcatcaagagatacttcaaggagaagttctacttcctggacctcatggagctatggaacgagataggcttgcagactgccatggggcagatgctggatctcatcaccactcataccggcgccaaggatctcgccagatacagaattcaggggtaccgtcgcattgtcaagtacaagacatcatactattcgttctacctgccggttgcatgtgcattactcttgaatggcgcgagattgagtgactatgttgagctgaaaaatgtacttatcgaaatgggcgtatactttcagatacaggatgactacttggattgctttggtgacccagaagtgattggcaaggttggaacagacattgaagactacaagtgttcctggctaatagtacaggctatggaactcgccaatgagaatgagatgaaaatactatatgagaactacgggaagtctgacccaaaatgcgtagcagaagtgaagagcgtttacagggagcttgatcttcaggacatatttttggagtacgagtcaagagtttacaagcacctggtttcgaccatcgacgccgagactgaccgtgcaattcgggatattttgaagtcgtttctgaagaagatttacaggaggaagaagtag</cdnaseq>

Protein Sequence

<aaseq>MGALAASIASHLPSGVSAAVAALAASPGEVVRRAAGLEDELREL LRLNGGGRGRGGAAAEQGQGEQTRDRFVRAYERLKSELLNDRAFNFDFTEETRQWVAK MMDYNVPGGKLNRGLSVVDSYMLLRQGTEVDDEDFYLACVLGWCVEWLQASALVLDDI TDNAYTRRDNLCWYKLPTVGMSAINDGVLLKCHVQAIIKRYFKEKFYFLDLMELWNEI GLQTAMGQMLDLITTHTGAKDLARYRIQGYRRIVKYKTSYYSFYLPVACALLLNGARL SDYVELKNVLIEMGVYFQIQDDYLDCFGDPEVIGKVGTDIEDYKCSWLIVQAMELANE NEMKILYENYGKSDPKCVAEVKSVYRELDLQDIFLEYESRVYKHLVSTIDAETDRAIR DILKSFLKKIYRRKK</aaseq>

Gene Sequence

<dnaseqindica>3099..3227#2836..2907#2628..2717#2504..2548#2334..2429#2166..2217#1990..2078#1780..1896#1588..1674#1361..1476#1244..1268#1..306#atgggggcgctggcggcgtcgatcgcgtcgcacctgccgtcgggggtgtcggcggcggtggcggcgctggcggcgagcccgggggaggtggtgaggagggcggcggggctggaggacgagctccgggagcttctccggctgaacggcggcgggcgcgggcggggcggcgcggcggcggagcaggggcagggcgagcagacgagggacaggttcgtgcgcgcgtacgagcggctcaagagtgagctgctcaacgaccgagccttcaacttcgacttcactgaggagaccaggcagtgggtcgccaaggtacgtcttactctctctatacctaatgaacacgattaattgcaagtttattactgtacaacatacatgtggtttggattaaatcatgcttgatccatggatcgttaaggtttagatgcagatttaactcggttttcatttgcatttttttttcaaactgttaaacagtgtgtttttttaaaactttttatataaaaattgctttaaaatatcaaataaatttattttaagtttaaaataactaaagctcaattaattgattttttttcgttttgtgtgctctgactttatctccatcttaatttctcccaaacactgtgcatacatagttctgtcacggacaaatgtcaaaatttcaaacctaactttaaactccatgatggggtttttcaccccaagtatattttttagcattagttttttaactataaataatacatactttgaccaataacatctataaaagtaagatgctttaaataaaaagagttgtatattatgatagtttgtttaatgataaatctagtaacatcaattttatattattgatcttttttattttttttgctattaaatagtcaaagttaaaaatgattgacttagcactattatgaacatgcttatactttgagacggggacattataaaatatttttggttgcttaattcatatggcttctctatacgcatcaaattcacattgatggttatgcctgtcaagatgagttctttaactgttcttggtactagtaccactgaaaaaatggttcttttgtttgtaacttctatgttcaatacttcaatctaatcaaacctgcagaaatattttaaccttgatggtttgtttggtaaaatacttttatatggtgttatctccgttgtttctgacgaaaatggaaatgtaatgcgtcctctgttgttttctttgctgttgcagatgatggactacaacgtgccaggaggtgagcaagctagcatccatgcccatgcagaattgatctggccctgctgccctgaaagctaagctgacatgtctcgtgacgtttttctgaagggaaactgaaccgtgggctctcggtggtggacagctacatgctgctgagacaaggaaccgaggttgacgacgaggatttctacctcgcctgcgtgctcggttggtgcgtcgaatgggtaaacaacaccgtcatccctgcccaatcactagcgaaacaaaactctgttgtgtcagtctgtcagatcttggtactattcatcatgaattttggtgcctgaattctgcagctgcaagcgtcagcccttgtgctcgatgacatcacggacaacgcctacacgaggcgagataacctctgctggtacaagctaccaacggtgcgatccatttcttgctgtgttctctttgtggtagatctgaatctctgtcctgagaatgattgattaactgaaaaatgttcgtgtaattgacaattttgtcaggttggcatgtctgctataaacgatggtgtgctgctcaagtgccatgtccaggcaatcatcaagagatacttcaaggagaagttctacttcctggacctcatggagctatggaacgaggtaattggagggcctgaacaaacacaaaacttgttaggatttcatctttaattggcatatattgctcagttttgatcttgttttttgggacagataggcttgcagactgccatggggcagatgctggatctcatcaccactcataccggcgccaaggatctcgccagatacagaattcaggggtatgcatgcagtgtataagtaactctactcaagttaaaatagcattagtgatttctcttaatttgctcccaaattgattctgccaggtaccgtcgcattgtcaagtacaagacatcatactattcgttctacctgccggtgagtctgagcttcaaactgaacagttaaatgaatgatgaaattcctctagttctgaaaagacaactgtttgttgtagtagaccagtagttctgaatttgtttccttttcatcaggttgcatgtgcattactcttgaatggcgcgagattgagtgactatgttgagctgaaaaatgtacttatcgaaatgggcgtatactttcagatacaggtccgtttatacttcctaaatggttgtattgtcctcaacttcatgattaattctgacataaatgcacttctcaggatgactacttggattgctttggtgacccagaagtgattggcaaggtacttacataaaaacttgtctttacattttgtttctgctggtaaaatgctctgctttactgagctcaatgtggtacaggttggaacagacattgaagactacaagtgttcctggctaatagtacaggctatggaactcgccaatgagaatgagatgaaaatactatatgtaagaaaaaccacaatttttttcttctatgctatgatctcttcggagaaagcaaccacagattttttccaagtactaactgcacatatatttgcgtgtaaatttgttgatttctcaggagaactacgggaagtctgacccaaaatgcgtagcagaagtgaagagcgtttacagggagcttgatcttcaggtactacaactctttctaaccagactagttagaaagcataataagatatgcaatgccatgacccttttaacaagttcatctggttctgtattagccaccctgattgttactcgaaaggtgaattttccaaccacagaaaaacgagacatctaactgtgaacgtttttcttgctcctttattacttatgtaggacatatttttggagtacgagtcaagagtttacaagcacctggtttcgaccatcgacgccgagactgaccgtgcaattcgggatattttgaagtcgtttctgaagaagatttacaggaggaagaagtag</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0657300, RefSeq:Os04g0657300