Os04g0657500

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Revision as of 11:32, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0657500| Description = Lipase, class 3 family protein| Version = NM_001060658.1 GI:115461045 GeneID:4337262| Length = 3446 bp| Definition ...")
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Gene Name

Os04g0657500

Description

Lipase, class 3 family protein

Version

NM_001060658.1 GI:115461045 GeneID:4337262

Length

3446 bp

Definition

Oryza sativa Japonica Group Os04g0657500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:33928820..33932265

Sequence Coding Region

33928889..33929171,33929237..33929464,33929570..33930189,33931674..33931931

Expression

GEO Profiles:Os04g0657500

Genome Context

<gbrowseImage1> name=NC_008397:33928820..33932265 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:33928820..33932265 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagcaagctcgactactgcttcagcaatgactacatggtgctgcgccctgacagggccggcgcgtacgagctcctgcacctcctcttctcccccaaggtcggccggaacaaggccgtcgactgcttcaccagcaccgagctccacagcttccggcgccgcctctccatcttcctcaacctcctcctgcagctcttcctcctctcgctagtcggccccctcgtcgccgtcctcggcggcgcgctcgagttcgccctcaacctcgccagcaacgtcctccatgggagaatggagtatcctgatcggaagtcggcgtcgtaccgatcaatcaccgggctcatcgacccgagggttgatctggagaggagcatcacgccggcggacagccggtaccacgccgcgctctgcgtcatggcgtccaaggtggcgtacgagaacgaggcgttcatccgcgacgtcgtcacccgccgctggcagatggagttcgtccagttcttcaactgctggaacgagttcgagaacgcgtacacggcgcaggcgttcgtgttctgcgacaaggcggcggacgcggagctggtggtggtggcgttccggggcacgccggcgctggacgtggcgcggtggtgcgccgacgtggacccgtcgtggtacaagatcccgcggctggggcgcgcgcacgcggcgtacacgcacgcgctgggcgcgcagcggaacatcgggtggcccaagtgggtggagcacgtgaagggcaagccgcagcgggtgcacgcctactacgccatccgcgacgccgtgaagcggctgctggaggcgaacggcagggcgagggtgctggtcgccgggcatggctccggcggcgcgctggcggtgctgttcgcgacggtgctggcgtaccacaaggagaaggcggcgctggaccggctcgccggcgtgtacaccttcgggcagccgcgggtcggcgacgccatgctcgccatgttcgccgagaggaacctggacaggccgaggaagaggcacttccggatcacctacggcgacgacccgctgccgcgccttccgcacgagagctccgccgcgcacttcctccacttcggcatccgcctccacttcgacagcttatacaacctcaaggtggtgaaggagttgccgggagatgggagctcgtcgtcgtcggcggcggagttcgcgacgagccgcatcaacgcggcgtgggagctggcccggagcgcgtacctggggtactggaggagcgcctactgccgggaagggtggctgctgatggcggcgagggcggcggcggtggcgctgcctggcctgccgttccacagggtgcaggactacgtcaatgccgtcacgctcgccggctcgaacattcccaaggacatgtga</cdnaseq>

Protein Sequence

<aaseq>MSKLDYCFSNDYMVLRPDRAGAYELLHLLFSPKVGRNKAVDCFT STELHSFRRRLSIFLNLLLQLFLLSLVGPLVAVLGGALEFALNLASNVLHGRMEYPDR KSASYRSITGLIDPRVDLERSITPADSRYHAALCVMASKVAYENEAFIRDVVTRRWQM EFVQFFNCWNEFENAYTAQAFVFCDKAADAELVVVAFRGTPALDVARWCADVDPSWYK IPRLGRAHAAYTHALGAQRNIGWPKWVEHVKGKPQRVHAYYAIRDAVKRLLEANGRAR VLVAGHGSGGALAVLFATVLAYHKEKAALDRLAGVYTFGQPRVGDAMLAMFAERNLDR PRKRHFRITYGDDPLPRLPHESSAAHFLHFGIRLHFDSLYNLKVVKELPGDGSSSSSA AEFATSRINAAWELARSAYLGYWRSAYCREGWLLMAARAAAVALPGLPFHRVQDYVNA VTLAGSNIPKDM</aaseq>

Gene Sequence

<dnaseqindica>70..352#418..645#751..1370#2855..3112#gacttgtcatccatagccattgacgacgacgagctctactagcaatcgatcgatcgagttctcgccgccatgagcaagctcgactactgcttcagcaatgactacatggtgctgcgccctgacagggccggcgcgtacgagctcctgcacctcctcttctcccccaaggtcggccggaacaaggccgtcgactgcttcaccagcaccgagctccacagcttccggcgccgcctctccatcttcctcaacctcctcctgcagctcttcctcctctcgctagtcggccccctcgtcgccgtcctcggcggcgcgctcgagttcgccctcaacctcgccagcaacgtcctccatggtcagtggtgacactagcttgcatggatgtctcggatagttaaccctaattgtgtgttggtgcagggagaatggagtatcctgatcggaagtcggcgtcgtaccgatcaatcaccgggctcatcgacccgagggttgatctggagaggagcatcacgccggcggacagccggtaccacgccgcgctctgcgtcatggcgtccaaggtggcgtacgagaacgaggcgttcatccgcgacgtcgtcacccgccgctggcagatggagttcgtccagttcttcaactgctggaacggtaagcacagcatcaaggacaggttctgtacagctccatgcgcgcaccggcgcacgcacgcaacgtgtttgatgttatgcgtgtggtgtttgttgtattgtgcagagttcgagaacgcgtacacggcgcaggcgttcgtgttctgcgacaaggcggcggacgcggagctggtggtggtggcgttccggggcacgccggcgctggacgtggcgcggtggtgcgccgacgtggacccgtcgtggtacaagatcccgcggctggggcgcgcgcacgcggcgtacacgcacgcgctgggcgcgcagcggaacatcgggtggcccaagtgggtggagcacgtgaagggcaagccgcagcgggtgcacgcctactacgccatccgcgacgccgtgaagcggctgctggaggcgaacggcagggcgagggtgctggtcgccgggcatggctccggcggcgcgctggcggtgctgttcgcgacggtgctggcgtaccacaaggagaaggcggcgctggaccggctcgccggcgtgtacaccttcgggcagccgcgggtcggcgacgccatgctcgccatgttcgccgagaggaacctggacaggccgaggaagaggcacttccggatcacctacggcgacgacccgctgccgcgccttccgcacgagagctccgccgcgcacttcctccacttcggcatccgcctccacttcgacagcttatacaacctcaaggtgaacatccatgcctctcttctctagcttgatcactgtctggttatatttccttcagaaaaacgttcatttttttttctccttctgatcatatattgatcaatgcatgcttttacaagcacgtatataccagcttctgatacattggtactcgaggtattatattcaggcttaaacaggttaattttaacccaatgtagtatagaaaaaaccgatctgttggatcaaaggcaatagatgttcgttttttggtgtaggatacggtaataaaattctaggttagttgatactcatggaagaggattttgatccctcgaggggatattcgctcgttgtttgcatgtcactcaaatggttatgaaaaaatttgaaaaaatttaagaagatgtattaatatgtgatatatcactccacaaacatgcaagtaaaaattcaacttctacatctcgcaacgaaaaaaacaaatttgactctgaatatacgttaactagctgcggttcaatttgtttttttcgttacgagatgtagaaattgcatgtttgtggagtgttatatcacatgttaatacaccttcccaattttttccaaatttttttataaccatttaagtgacatgcaaagaacgaggggatatcccctcgagggattaaaacagtttcccgatactcatctataacatatactccttccattttttaatatatatatatatatatatatatatatgacaccgttaacttttatcgtgacatttaactattcattctattaaaaaatatataaatgttatttattttattgtgtcttgttttatcatcaaagaaactctaacattaatttatatttttataaatttacactaaatttttatataagacgaatggtttagacagacaaatcagaaacgggtgatgtactgatgttgaccggttggccccaaagaatgcttggtaaatttagctatacggtaaagaaatttctttcagattttgtgttcattttgagtggtacagcaagcacatcgtatgaacaatccagacagagaatccagtgaaagtgagcttttgttcggttcttatgacactagtacatgcaggcaggcagtcttgatggtggcctgaataatctcattgctgatgtaaggacacaaatttctggttgtatgcttcagatgtagtgatgagtagataaatgaagtgtggtggatagtgattgatgtagggaaattcaacgagaaccactgagccagagttgtacctgaattcagccccaagattcgttatcatcgtctgaatgaaaccaaatgaaaattaaacggaatacaatcttcttctgttctgcagttatctgcaatgtcctgtctgaaggttgtacatttggttgctgttcttcatgaaagatcttgttgctgcatgcatgtccccttccatgacacgatctctgaatattgctcatcaatcgtgctgtacgtgtaacttatgcaggtggtgaaggagttgccgggagatgggagctcgtcgtcgtcggcggcggagttcgcgacgagccgcatcaacgcggcgtgggagctggcccggagcgcgtacctggggtactggaggagcgcctactgccgggaagggtggctgctgatggcggcgagggcggcggcggtggcgctgcctggcctgccgttccacagggtgcaggactacgtcaatgccgtcacgctcgccggctcgaacattcccaaggacatgtgacgatgtatcgagtttctgaatgcaatgctgcagagactgcagctgcaggcatcaaacttggatgagagattgcaactgcaatataatggcagatgacgactgcatcgagcaggctatgggacttgtcacttgtgtaactgtaatgtgacgtacgtactggtagtaattaattacgggtgcaactgtatgttgtcgcgactaattctgcttctactgaataaacatgtagtgataagtgatatgcttgtgagttgtgacttgtaagcatttgatgtactgggacaagtactactagtataactatgagaagataaataattgaagttcttgtttt</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0657500, RefSeq:Os04g0657500