Os04g0664800

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Revision as of 11:33, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0664800| Description = Similar to Cell wall invertase (EC 3.2.1.26)| Version = NM_001060707.2 GI:297603517 GeneID:4337312| Length = 2499 bp...")
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Gene Name

Os04g0664800

Description

Similar to Cell wall invertase (EC 3.2.1.26)

Version

NM_001060707.2 GI:297603517 GeneID:4337312

Length

2499 bp

Definition

Oryza sativa Japonica Group Os04g0664800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:34339471..34341969

Sequence Coding Region

34339540..34339776,34339857..34339950,34340087..34340490,34340591..34341483,34341596..34341604
,34341750..34341903

Expression

GEO Profiles:Os04g0664800

Genome Context

<gbrowseImage1> name=NC_008397:34339471..34341969 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:34339471..34341969 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgttggctggattgcccctctccgtctttgccatcgctgtccatttttgccttgttttctcctcctcctcttctcctccggtttgccctgcaaacggccaccgtgaccgaacggcgtaccacttccaacccgccaagaactggcagaacgatccgaatgggcctgtgtactacaatggcatgtaccacctcttctaccagtacaacccgcacggcgcgctctgggacgtcggcaacctctcctgggggcactccgtctccggcgacctcgtgaactgggccgccctcgacaacgcgctcgatcccacagcgccattcgacgccaatggttgcgcgtcggggtcagtcaccatcctccccgacggcgtgcccgtcgtcatgtactccggcatcgacgcccgccgccggcaggtccagaacgtcgcgttccccaagaaccctcgcgacccgctcctccgcgagtggaccaagcccgggtacaacccggtcatccctgtccccgccgacgtctcgccggacaatttccgggaccccaccaccgcctggctcggcagcgacggcctgtggcggttcgccatctccgccgtggccgacggcgtgggcgcgacgctcgtgtaccggagcgccgacttcctgcggtgggagcgcaacgcggcgccgctgcacgcctcgcgggacgcggtcatggccgagtgccccgacctgttccccgtcgccgagcacggcgaggacgggctcgacctcgacgcgtcggcgatcggcggcgccggcgccggcgtgaggcacgtcctcaaggtcagcatgccggacaccctcgaggactactacatggtcggacggtacgacgacgcggacgacacgttcaccgtgccgccggaggacctggaagcccacggcgatgactaccggcggtggcggcggatcgaccacggccacctgtacgcgtccaagacgttctacgacgcgggcaagaaacggcgcgtgctgtgggcgtgggtgaacgagtccgacagcgaggccgacgacgtcaccaagggctggtccggccttcagtcgtttccgcgggcggtgtggctggacgagggcgggaggcagctggtgcagtggccggtggaggagatcgagacgctgaggcggaaacgcggcgttctgctcggcggaaacgaggtggaggcgggcgggctgcgcgagatcggcggcatcgcgggctcgcaggcggacgtggaggtagcgttcgagatcgcgagcctcgcgggcgccgaccgcctcgagcccgaccatttgcgtgaccccgacgcgctgtgcggggagaatggcgcggcggtgcacggcggaatcggcccgttcgggctgctcgtcatggcatccggcgacctgcgcgagcgcaccgccgttttcttcagggtgttcaggctctcgcacgggtacacggtcctcatgtgcacggacctgacacggtcaacttcaagagcaggggtgtacaagccatcccacggaggattcgtggacatagacatagagaaggacagggctatatcgcttcgaaccctgatcgatcattcgatcgtggagagttttggcggtggggggcggacgtgcatgacggctcgagtgtaccctgaacatgtagcaacggggagcagccacctgtacgtgttcaacaatgcgtcagatgcggtgaaggtgtccaagctggaggcatgggagctcgcgacggctagtgtcaatgctggagacgacgggctgatttcgtatggtggtcctgtatgtgctgctcaagtgcagtaa</cdnaseq>

Protein Sequence

<aaseq>MALAGLPLSVFAIAVHFCLVFSSSSSPPVCPANGHRDRTAYHFQ PAKNWQNDPNGPVYYNGMYHLFYQYNPHGALWDVGNLSWGHSVSGDLVNWAALDNALD PTAPFDANGCASGSVTILPDGVPVVMYSGIDARRRQVQNVAFPKNPRDPLLREWTKPG YNPVIPVPADVSPDNFRDPTTAWLGSDGLWRFAISAVADGVGATLVYRSADFLRWERN AAPLHASRDAVMAECPDLFPVAEHGEDGLDLDASAIGGAGAGVRHVLKVSMPDTLEDY YMVGRYDDADDTFTVPPEDLEAHGDDYRRWRRIDHGHLYASKTFYDAGKKRRVLWAWV NESDSEADDVTKGWSGLQSFPRAVWLDEGGRQLVQWPVEEIETLRRKRGVLLGGNEVE AGGLREIGGIAGSQADVEVAFEIASLAGADRLEPDHLRDPDALCGENGAAVHGGIGPF GLLVMASGDLRERTAVFFRVFRLSHGYTVLMCTDLTRSTSRAGVYKPSHGGFVDIDIE KDRAISLRTLIDHSIVESFGGGGRTCMTARVYPEHVATGSSHLYVFNNASDAVKVSKL EAWELATASVNAGDDGLISYGGPVCAAQVQ</aaseq>

Gene Sequence

<dnaseqindica>2194..2430#2020..2113#1480..1883#487..1379#366..374#67..220#aatttgcaaactctactgttttgtttgatagttttgctagctgctgcttcactctactgttcggccatggcgttggctggattgcccctctccgtctttgccatcgctgtccatttttgccttgttttctcctcctcctcttctcctccggtttgccctgcaaacggccaccgtgaccgaacggcgtaccacttccaacccgccaagaactggcagaacggtgcgtatgcaattacctctctgagtttctgtgaattcttgcccaaaaatactatcaattcccgttctctgatagtgtatactgtattttcatttggatatatctggatgaactgaaccatgtgggaacggatgaaaccaattagatccgaatggtacgtgttttttttactgatactctgctcatatttctgtcttcttcaatccatggtaatttgtaccttaattagggcgtagtgaccattaggttgttcttaatatgatcagggcctgtgtactacaatggcatgtaccacctcttctaccagtacaacccgcacggcgcgctctgggacgtcggcaacctctcctgggggcactccgtctccggcgacctcgtgaactgggccgccctcgacaacgcgctcgatcccacagcgccattcgacgccaatggttgcgcgtcggggtcagtcaccatcctccccgacggcgtgcccgtcgtcatgtactccggcatcgacgcccgccgccggcaggtccagaacgtcgcgttccccaagaaccctcgcgacccgctcctccgcgagtggaccaagcccgggtacaacccggtcatccctgtccccgccgacgtctcgccggacaatttccgggaccccaccaccgcctggctcggcagcgacggcctgtggcggttcgccatctccgccgtggccgacggcgtgggcgcgacgctcgtgtaccggagcgccgacttcctgcggtgggagcgcaacgcggcgccgctgcacgcctcgcgggacgcggtcatggccgagtgccccgacctgttccccgtcgccgagcacggcgaggacgggctcgacctcgacgcgtcggcgatcggcggcgccggcgccggcgtgaggcacgtcctcaaggtcagcatgccggacaccctcgaggactactacatggtcggacggtacgacgacgcggacgacacgttcaccgtgccgccggaggacctggaagcccacggcgatgactaccggcggtggcggcggatcgaccacggccacctgtacgcgtccaagacgttctacgacgcgggcaagaaacggcgcgtgctgtgggcgtgggtgaacgagtccgacagcgaggccgacgacgtcaccaagggctggtccggccttcaggtcagcgcgcccgtcacgatcaacatatacaatggcaacgcaatcgcaaccctgtgtgctcagtgctcactggctcgatcgtgcgatctgttttatgcagtcgtttccgcgggcggtgtggctggacgagggcgggaggcagctggtgcagtggccggtggaggagatcgagacgctgaggcggaaacgcggcgttctgctcggcggaaacgaggtggaggcgggcgggctgcgcgagatcggcggcatcgcgggctcgcaggcggacgtggaggtagcgttcgagatcgcgagcctcgcgggcgccgaccgcctcgagcccgaccatttgcgtgaccccgacgcgctgtgcggggagaatggcgcggcggtgcacggcggaatcggcccgttcgggctgctcgtcatggcatccggcgacctgcgcgagcgcaccgccgttttcttcagggtgttcaggctctcgcacgggtacacggtcctcatgtgcacggacctgacacggtaagtgtaaaaaaactgacatcttactcgggctgggctaggagaaatccccgtattttgggccaggccgcctgaaggctgaaacgtttagtcgagatctcatgtctgttcttgggccaattttctatttgtacaggtcaacttcaagagcaggggtgtacaagccatcccacggaggattcgtggacatagacatagagaaggacagggctatatcgcttcgaaccctggtgagttcacttcacattttgagcgctcacctgacaaacatttggcactgataacatgctcgacctaacgaattgggcagatcgatcattcgatcgtggagagttttggcggtggggggcggacgtgcatgacggctcgagtgtaccctgaacatgtagcaacggggagcagccacctgtacgtgttcaacaatgcgtcagatgcggtgaaggtgtccaagctggaggcatgggagctcgcgacggctagtgtcaatgctggagacgacgggctgatttcgtatggtggtcctgtatgtgctgctcaagtgcagtaatagctgctggcatatgctctatagtactccctctatttcgaaatgtttgacactattgactttttagca</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0664800, RefSeq:Os04g0664800