Os04g0664900

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Revision as of 11:33, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0664900| Description = Glycoside hydrolase, family 32 protein| Version = NM_001060708.2 GI:297603519 GeneID:4337313| Length = 2506 bp| Def...")
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Gene Name

Os04g0664900

Description

Glycoside hydrolase, family 32 protein

Version

NM_001060708.2 GI:297603519 GeneID:4337313

Length

2506 bp

Definition

Oryza sativa Japonica Group Os04g0664900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:34342550..34345055

Sequence Coding Region

34342700..34342912,34342990..34343083,34343188..34343591,34343680..34343761,34343884..34344553
,34344808..34344816,34344947..34345028

Expression

GEO Profiles:Os04g0664900

Genome Context

<gbrowseImage1> name=NC_008397:34342550..34345055 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:34342550..34345055 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtgccctgtgaacggaaagctgcagctgcacgatggcagaactgcctaccacttccagcctgccaagttctggcagaatgatccaaatgggcctctgtaccacaacggtttgtaccatttcttctaccagtacaacccgcacggcccgctctgggacaccggcaagctctcctggggccactccgtctccggcgacctcgtgaactgggccttcctcggcacggcgatcgaccccaccgacccgttcgatgtcaacggatgctggtcgggctccgccaccgtcctcctcggcggccgccccgccttcctctacaccggcagggacgccggcggcgtgcaggtgcagaacgtgtccttcgccaagaacccgctcgacccgctcctccgcgagtgggagaagcccagctgcaacccgatcatcgccttccccgccgacgtcatcaacaacaacttccgcgacccgacgacagcgtggctcggccgggatggcctgtggaggatggtcgtcgccgccgaggtcgccggcgccggctccgccctggtgtaccggagcgccgacttcctccgctgggagcggaacgccgcgccgatgcactcgtcggcggccgtccccgtcctggagtgcccggacttcttcccggtggcggagcacggcatcgacggcctcgacacgtcggcgaacggcggcggcaccggcgtgaagcacgtgctcaagctcagcgagttcgacacgcaccaggacttctacatggtggggcggaatcggcgtgtgcagtggctgtgggtcaacgagtacgacagcaaggccgacgacgtcgccaagggctgggccggcgtccaggcgttcccgaggaaggtgtggctggacggcgacgggaagcagctgctgcagtggcccgtcgacgagatcgagacgctaaggacgaagcgtgtcgggctgcagggcacggaggtgaaggccggcggcctgcacgagatcgtcggcgtcgcgagctcccaggccgacgtcgaggtggtgttcgagatcccgaacctggaggacgaggccgagagcttcgatcccgactggctggatccccacaagctgtgcaaggacaagggcgccgcctccgcgcacggcggcgtcggcccgttcgggctcatcgtcatggcctccggcgacctgcaggagcaaaccgccgtcttcttcagagtgttcaaacaccatggaaagtacaaggtcttcatgtgcactgacctcacaaggtcatcgacaaaagcagatgtgtacaaggacgcttacggaggattcgttgatgtggacatacagaaggacaagagcatatcactcagaacactgattgaccactcgatgattgagagcttcggaggcggtggccgagcgtgcatcacaacccgggtataccctgagcacgcagcaacaagcagcagtcacctgtacgtgttcaacaatgggtcaggcacggtgaatgtgtccaagctcgaggcgtgggagatggccacggcgaccgtgaactctgcagatgcattggacgcaataacgcgtagctga</cdnaseq>

Protein Sequence

<aaseq>MCPVNGKLQLHDGRTAYHFQPAKFWQNDPNGPLYHNGLYHFFYQ YNPHGPLWDTGKLSWGHSVSGDLVNWAFLGTAIDPTDPFDVNGCWSGSATVLLGGRPA FLYTGRDAGGVQVQNVSFAKNPLDPLLREWEKPSCNPIIAFPADVINNNFRDPTTAWL GRDGLWRMVVAAEVAGAGSALVYRSADFLRWERNAAPMHSSAAVPVLECPDFFPVAEH GIDGLDTSANGGGTGVKHVLKLSEFDTHQDFYMVGRNRRVQWLWVNEYDSKADDVAKG WAGVQAFPRKVWLDGDGKQLLQWPVDEIETLRTKRVGLQGTEVKAGGLHEIVGVASSQ ADVEVVFEIPNLEDEAESFDPDWLDPHKLCKDKGAASAHGGVGPFGLIVMASGDLQEQ TAVFFRVFKHHGKYKVFMCTDLTRSSTKADVYKDAYGGFVDVDIQKDKSISLRTLIDH SMIESFGGGGRACITTRVYPEHAATSSSHLYVFNNGSGTVNVSKLEAWEMATATVNSA DALDAITRS</aaseq>

Gene Sequence

<dnaseqindica>2144..2356#1973..2066#1465..1868#1295..1376#503..1172#240..248#28..109#aaagtctcgtcctgttcatcttctccaatgtgccctgtgaacggaaagctgcagctgcacgatggcagaactgcctaccacttccagcctgccaagttctggcagaatggtaatgtacaccttgcccttattgttctatcattgtctgcttgaatcatggcgaagttcataacttgtttgtcaaatcgtgtttggatctctgaatttggatggacactgccgctggcgaaactgaacagatccaaatggtacgatgccccttcttcctcctccatcattttcttttcttccattatattcagtcattcagaatgagtccatgcacgaactcttcactcttgtgagcttaaaaacctgtaatcgaaaggtattagtccacataattaagcatattttaccatacacaataaagtttggatgatcattgccaatcatcaggttgtcttggtcatgatcagcataattgcccagtaatggcagtaattttccattgaaatggcagggcctctgtaccacaacggtttgtaccatttcttctaccagtacaacccgcacggcccgctctgggacaccggcaagctctcctggggccactccgtctccggcgacctcgtgaactgggccttcctcggcacggcgatcgaccccaccgacccgttcgatgtcaacggatgctggtcgggctccgccaccgtcctcctcggcggccgccccgccttcctctacaccggcagggacgccggcggcgtgcaggtgcagaacgtgtccttcgccaagaacccgctcgacccgctcctccgcgagtgggagaagcccagctgcaacccgatcatcgccttccccgccgacgtcatcaacaacaacttccgcgacccgacgacagcgtggctcggccgggatggcctgtggaggatggtcgtcgccgccgaggtcgccggcgccggctccgccctggtgtaccggagcgccgacttcctccgctgggagcggaacgccgcgccgatgcactcgtcggcggccgtccccgtcctggagtgcccggacttcttcccggtggcggagcacggcatcgacggcctcgacacgtcggcgaacggcggcggcaccggcgtgaagcacgtgctcaagctcagcgagttcgacacgcaccaggacttctacatggtggggcggtacgacgacgaggggacaccttctcgccggaggagcctgaccgcggcgacaactgccggagatggcgctgcctcgactacggccaggcgtacgccgccaagtcgttcttcgacgcgcgcaggaatcggcgtgtgcagtggctgtgggtcaacgagtacgacagcaaggccgacgacgtcgccaagggctgggccggcgtccaggtcacctcccgctcgccaccatgcacgccggcgacgtcgccatcgatctgattcggcgacgaactgaatatcttgagctgccgtgcaggcgttcccgaggaaggtgtggctggacggcgacgggaagcagctgctgcagtggcccgtcgacgagatcgagacgctaaggacgaagcgtgtcgggctgcagggcacggaggtgaaggccggcggcctgcacgagatcgtcggcgtcgcgagctcccaggccgacgtcgaggtggtgttcgagatcccgaacctggaggacgaggccgagagcttcgatcccgactggctggatccccacaagctgtgcaaggacaagggcgccgcctccgcgcacggcggcgtcggcccgttcgggctcatcgtcatggcctccggcgacctgcaggagcaaaccgccgtcttcttcagagtgttcaaacaccatggaaagtacaaggtcttcatgtgcactgacctcacaaggtaattgaaagttgaaactcctccaagccaattaaaacttaaaatttgtgacccaaacgattaccaatttttgcacaattttcgctgaaattgcatacttgtaggtcatcgacaaaagcagatgtgtacaaggacgcttacggaggattcgttgatgtggacatacagaaggacaagagcatatcactcagaacactggtaaaattctgtcactaaaatcttagttcttcagtacgtaaaccatgcgcatgaactgaaatcgaacgaaaattcagattgaccactcgatgattgagagcttcggaggcggtggccgagcgtgcatcacaacccgggtataccctgagcacgcagcaacaagcagcagtcacctgtacgtgttcaacaatgggtcaggcacggtgaatgtgtccaagctcgaggcgtgggagatggccacggcgaccgtgaactctgcagatgcattggacgcaataacgcgtagctgaaacgtcttagtatgcatggcttggctaattcgatcaatggttactgtgctgtggccgatcgattttatcatttatcattcatcagtcacacgaccttcaaggccatagcctgcctgtctggaggtttattgccttattcccaggataaaa</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0664900, RefSeq:Os04g0664900