Os04g0672100

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Revision as of 11:34, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0672100| Description = Similar to Phytosulfokine receptor precursor (EC 2.7.1.37) (Phytosulfokine LRR receptor kinase)| Version = NM_0010607...")
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Gene Name

Os04g0672100

Description

Similar to Phytosulfokine receptor precursor (EC 2.7.1.37) (Phytosulfokine LRR receptor kinase)

Version

NM_001060758.1 GI:115461245 GeneID:4337364

Length

3766 bp

Definition

Oryza sativa Japonica Group Os04g0672100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:34697339..34701104

Sequence Coding Region

34697682..34700720

Expression

GEO Profiles:Os04g0672100

Genome Context

<gbrowseImage1> name=NC_008397:34697339..34701104 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:34697339..34701104 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagaggttactactgcttcttccatttcttggtggtgtccgttctgctccacgtccatggcggccgctccgagagccagacgtgcgaccccaccgacctggcggcgctcctggccttctccgatggcctggacacgaaggccgccgggatggtcgggtggggccccggcgacgccgcctgctgctcgtggacgggcgtgtcctgtgatctcgggagggtggtggcgctggatctctccaaccggagcctctcccggaactcgcttcgcggcggcgaggcggtggcgcggctcggccggctgccgagcctgcggcgcctcgacctcagcgcgaacggcctcgccggcgcgttcccggcgggcggcttcccggcgatcgaggtggtgaacgtctcctccaacgggttcaccgggccgcaccccgcgttccccggcgcgccgaacctgacggttcttgatatcaccggcaacgccttctccggcggcatcaacgtcaccgcgctctgcgcttcgccggtcaaggtcctgcggttctcggcgaatgccttctctggtgatgtgccggccggctttggtcagtgcaagctgctcaacgacctcttccttgatggcaatggccttactgggagcctccccaaagatctgtacatgatgccagcgctgagaaaactaagtttgcaggagaataagctctccggcagcctcgacgacgacctcggtaacctcactgagattacgcagattgacttgtcatataacatgttcaatggcaatatccctgatgtgtttgggaaattgaggagcttggagtccttaaacttggcttccaaccaattgaatggcacattgcctctatccctgtcgagctgcccgatgcttagagtggtcagcctgaggaacaattcgctgtccggtgagattaccattgactgcagattgctcacgaggctgaacaactttgatgctgggaccaacaagctgcgtggtgctataccgcctcgccttgcctcgtgcactgagttgaggacgctgaaccttgcaaggaacaagcttcagggggagctaccggagagcttcaagaatttgacatcactgtcatacctttctcttacggggaatggttttaccaacttgtcatcagcattgcaagtcttgcagcacctgcccaacttaactagcttggtgctcaccaataacttccgtggtggtgaaaccatgccaatggacggcatcgaagggttcaagagaatgcaggttcttgtcctggcgaactgtgcactcttgggcacggttccaccttggctgcagagcttgaagagcctcagtgtgctggatatttcatggaacaatttgcatggggagatcccgccatggttaggcaacctcgacagtcttttctacatcgatctgtccaacaactcattcagtggggagcttcctgcaacctttacacagatgaagagtttaatttcaagtaatggctcaagtgggcaggcgtcaacaggagacctcccattattcgtcaagaagaattcgacttccactggtaaaggcttgcagtacaaccaactcagtagcttcccgtcatcactgatcctctcaaataacaagcttgttgggccaatattgccagcctttggccgtctagtgaagcttcatgtgctggacttgagctttaacaatttttctgggccaattcctgatgagttatcaaatatgtcgagcttggaaatattggatttagcccacaatgatctcagtgggagcataccatcatctctaacgaagctgaactttctgtccaagtttgatgtttcgtacaacaatttgtctggagatatcccggcaggaggccaattctccacgttcactagtgaggattttgcaggcaatcacgcactacactttcctcggaattcctccagcacaaagaattctcctgatacggaagcaccacatcgtaagaagaacaaagcaacccttgtggcccttggacttggtactgcagtgggggttatttttgtcttgtgtattgcttctgtggttatatcaaggattattcattcaagaatgcaggagcataatccaaaggcagtagcgaatgctgatgactgctcagagtctccgaactcaagcttggtgctgcttttccagaacaacaaggatcttggtattgaagatatattgaagtcaaccaacaactttgatcaagcctatatagttggttgtggtggttttggacttgtttacaagtcaacactaccagatgggaggagagttgcaatcaagcggctttcaggcgattactctcagattgagcgggagtttcaagctgaagtggaaacactatcacgtgcccagcatgacaaccttgttctgctagaaggctattgcaagataggcaatgacagactactgatctatgcatacatggagaatggcagcttggattactggcttcatgagagggctgatggtggtgccctgctggattggcagaagaggctacggattgcacagggatcggcaagggggctggcatacttgcacctgtcgtgtgagccccatatattgcaccgagatatcaagtcaagcaatatcctcttggatgagaactttgaagctcatttggctgatttcgggttggcaaggctcatatgcgcatacgagacgcatgtcacaacagatgtagtgggaaccttgggctacattccacctgaatatgggcagtcacctgtggctacttacaagggtgatgtgtacagctttggaattgttcttctggagctactcactgggcggcggcctgtggacatgtgcaggccaaaagggagcagagatgtagtgtcctgggtgcttcagatgaagaaggaagacagggaaactgaagtatttgatccaaccatatatgacaaggagaatgaaagccagttgatcagaatcctggagatagcactgctttgtgtgactgctgctcctaagtcaagaccaacatcgcagcagctagtcgaatggcttgaccatatcgctgaaggttaa</cdnaseq>

Protein Sequence

<aaseq>MRGYYCFFHFLVVSVLLHVHGGRSESQTCDPTDLAALLAFSDGL DTKAAGMVGWGPGDAACCSWTGVSCDLGRVVALDLSNRSLSRNSLRGGEAVARLGRLP SLRRLDLSANGLAGAFPAGGFPAIEVVNVSSNGFTGPHPAFPGAPNLTVLDITGNAFS GGINVTALCASPVKVLRFSANAFSGDVPAGFGQCKLLNDLFLDGNGLTGSLPKDLYMM PALRKLSLQENKLSGSLDDDLGNLTEITQIDLSYNMFNGNIPDVFGKLRSLESLNLAS NQLNGTLPLSLSSCPMLRVVSLRNNSLSGEITIDCRLLTRLNNFDAGTNKLRGAIPPR LASCTELRTLNLARNKLQGELPESFKNLTSLSYLSLTGNGFTNLSSALQVLQHLPNLT SLVLTNNFRGGETMPMDGIEGFKRMQVLVLANCALLGTVPPWLQSLKSLSVLDISWNN LHGEIPPWLGNLDSLFYIDLSNNSFSGELPATFTQMKSLISSNGSSGQASTGDLPLFV KKNSTSTGKGLQYNQLSSFPSSLILSNNKLVGPILPAFGRLVKLHVLDLSFNNFSGPI PDELSNMSSLEILDLAHNDLSGSIPSSLTKLNFLSKFDVSYNNLSGDIPAGGQFSTFT SEDFAGNHALHFPRNSSSTKNSPDTEAPHRKKNKATLVALGLGTAVGVIFVLCIASVV ISRIIHSRMQEHNPKAVANADDCSESPNSSLVLLFQNNKDLGIEDILKSTNNFDQAYI VGCGGFGLVYKSTLPDGRRVAIKRLSGDYSQIEREFQAEVETLSRAQHDNLVLLEGYC KIGNDRLLIYAYMENGSLDYWLHERADGGALLDWQKRLRIAQGSARGLAYLHLSCEPH ILHRDIKSSNILLDENFEAHLADFGLARLICAYETHVTTDVVGTLGYIPPEYGQSPVA TYKGDVYSFGIVLLELLTGRRPVDMCRPKGSRDVVSWVLQMKKEDRETEVFDPTIYDK ENESQLIRILEIALLCVTAAPKSRPTSQQLVEWLDHIAEG</aaseq>

Gene Sequence

<dnaseqindica>385..3423#gaagaggttgggaggaagaagaacggctgctgatgagagccgcattggagtcaaaaccaaccgtctctttctctcctctgactttcccccactctcctcctcttcttcttcttcctcctgtgatgccatcctcctctttcggcgcctcacaatcttgcgatccagctcatgtggcggacggaatgagagggaatttcccgttcttgcgctcctggatttcttgcccagaggaggagtcttgactcttgcgagcgtgttcgttcttggtgattagattcatgctgcctcgttgcaaggtggtgtgagttgttttcctggattcttgaagttgttcatgccctgcaggaagaaggggttcattttctgattccgtcgacggcggagatgagaggttactactgcttcttccatttcttggtggtgtccgttctgctccacgtccatggcggccgctccgagagccagacgtgcgaccccaccgacctggcggcgctcctggccttctccgatggcctggacacgaaggccgccgggatggtcgggtggggccccggcgacgccgcctgctgctcgtggacgggcgtgtcctgtgatctcgggagggtggtggcgctggatctctccaaccggagcctctcccggaactcgcttcgcggcggcgaggcggtggcgcggctcggccggctgccgagcctgcggcgcctcgacctcagcgcgaacggcctcgccggcgcgttcccggcgggcggcttcccggcgatcgaggtggtgaacgtctcctccaacgggttcaccgggccgcaccccgcgttccccggcgcgccgaacctgacggttcttgatatcaccggcaacgccttctccggcggcatcaacgtcaccgcgctctgcgcttcgccggtcaaggtcctgcggttctcggcgaatgccttctctggtgatgtgccggccggctttggtcagtgcaagctgctcaacgacctcttccttgatggcaatggccttactgggagcctccccaaagatctgtacatgatgccagcgctgagaaaactaagtttgcaggagaataagctctccggcagcctcgacgacgacctcggtaacctcactgagattacgcagattgacttgtcatataacatgttcaatggcaatatccctgatgtgtttgggaaattgaggagcttggagtccttaaacttggcttccaaccaattgaatggcacattgcctctatccctgtcgagctgcccgatgcttagagtggtcagcctgaggaacaattcgctgtccggtgagattaccattgactgcagattgctcacgaggctgaacaactttgatgctgggaccaacaagctgcgtggtgctataccgcctcgccttgcctcgtgcactgagttgaggacgctgaaccttgcaaggaacaagcttcagggggagctaccggagagcttcaagaatttgacatcactgtcatacctttctcttacggggaatggttttaccaacttgtcatcagcattgcaagtcttgcagcacctgcccaacttaactagcttggtgctcaccaataacttccgtggtggtgaaaccatgccaatggacggcatcgaagggttcaagagaatgcaggttcttgtcctggcgaactgtgcactcttgggcacggttccaccttggctgcagagcttgaagagcctcagtgtgctggatatttcatggaacaatttgcatggggagatcccgccatggttaggcaacctcgacagtcttttctacatcgatctgtccaacaactcattcagtggggagcttcctgcaacctttacacagatgaagagtttaatttcaagtaatggctcaagtgggcaggcgtcaacaggagacctcccattattcgtcaagaagaattcgacttccactggtaaaggcttgcagtacaaccaactcagtagcttcccgtcatcactgatcctctcaaataacaagcttgttgggccaatattgccagcctttggccgtctagtgaagcttcatgtgctggacttgagctttaacaatttttctgggccaattcctgatgagttatcaaatatgtcgagcttggaaatattggatttagcccacaatgatctcagtgggagcataccatcatctctaacgaagctgaactttctgtccaagtttgatgtttcgtacaacaatttgtctggagatatcccggcaggaggccaattctccacgttcactagtgaggattttgcaggcaatcacgcactacactttcctcggaattcctccagcacaaagaattctcctgatacggaagcaccacatcgtaagaagaacaaagcaacccttgtggcccttggacttggtactgcagtgggggttatttttgtcttgtgtattgcttctgtggttatatcaaggattattcattcaagaatgcaggagcataatccaaaggcagtagcgaatgctgatgactgctcagagtctccgaactcaagcttggtgctgcttttccagaacaacaaggatcttggtattgaagatatattgaagtcaaccaacaactttgatcaagcctatatagttggttgtggtggttttggacttgtttacaagtcaacactaccagatgggaggagagttgcaatcaagcggctttcaggcgattactctcagattgagcgggagtttcaagctgaagtggaaacactatcacgtgcccagcatgacaaccttgttctgctagaaggctattgcaagataggcaatgacagactactgatctatgcatacatggagaatggcagcttggattactggcttcatgagagggctgatggtggtgccctgctggattggcagaagaggctacggattgcacagggatcggcaagggggctggcatacttgcacctgtcgtgtgagccccatatattgcaccgagatatcaagtcaagcaatatcctcttggatgagaactttgaagctcatttggctgatttcgggttggcaaggctcatatgcgcatacgagacgcatgtcacaacagatgtagtgggaaccttgggctacattccacctgaatatgggcagtcacctgtggctacttacaagggtgatgtgtacagctttggaattgttcttctggagctactcactgggcggcggcctgtggacatgtgcaggccaaaagggagcagagatgtagtgtcctgggtgcttcagatgaagaaggaagacagggaaactgaagtatttgatccaaccatatatgacaaggagaatgaaagccagttgatcagaatcctggagatagcactgctttgtgtgactgctgctcctaagtcaagaccaacatcgcagcagctagtcgaatggcttgaccatatcgctgaaggttaaggttcagtcaagttcttaaatggtttcagtttgatcgatcaagatccatcctgatagtttcttaagatgattagttctgtaaataatatttacatagcgtgaaatgccaagagttcaatttccttctcatgccacccttcaagtaatagttcatatcatcctctttcctttcttcataaggtggttgcaagatcaccacaatgtaaaaaatgcattgtaggtttaaaccctcaggataacaccctagcagttacataaccggcttttctacagatttattgtatgttctgtaatttcagctactgctatggtatgaatgaacttttgtggggcatttgttttc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0672100, RefSeq:Os04g0672100