Os04g0679000

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Revision as of 11:35, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0679000| Description = Similar to Sorbitol transporter| Version = NM_001060812.1 GI:115461353 GeneID:4337418| Length = 1996 bp| Definition...")
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Gene Name

Os04g0679000

Description

Similar to Sorbitol transporter

Version

NM_001060812.1 GI:115461353 GeneID:4337418

Length

1996 bp

Definition

Oryza sativa Japonica Group Os04g0679000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:35072707..35074702

Sequence Coding Region

35072707..35072941,35073330..35074702

Expression

GEO Profiles:Os04g0679000

Genome Context

<gbrowseImage1> name=NC_008397:35072707..35074702 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:35072707..35074702 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggcttcgtgccaccgaggcggcgacgggcaacggcggcggcatgaggagccttccggatttcttggggaggaagagcaagtacgtgcgcatggacgacgtgctcccggatgagcagggagatggcggcggcggcggcggcgtcgttcgtgtccgcggcggcggcggcagcgggagatacgtctttgcctgctctgtcttcgcctccctcaaccatgtcctgctcggctacgatgttggtgtgatgagtggctgcatcatattcatccagaaggacctccacatcagtgaagtgcagcaagaagtgctcgtcgggtgcctcagcttcatctccctcctcggcagcctcgccgccgggaggacgtccgacgccgtcggccggaaatggaccatcgggctcgccgctgccgtgttccaggccggcgcggccgtcatgacgctcgcgccgtccttcgccgtgctcatgatgggccggctgctggccggcatcggcatcgggatcgggatcatggtggcgccggtgtacatatcggagatcacgccggccacgctgcgggggtcgtacgcctcgttcccggagatcttcatcagcctcggcatcctcctcggctacgtctccaacctcgccttctccggtctccccgaccacatcaactggcgagtcatgctcgccgccggcatcgtcccttccatctccgtcgcgttcgtgctgctggtgatcccggagtcgccgcggtggctcgtcatgcagggccgggccgccgaggcgcgcgcggtgcttctcaaggtcaccgatggcgaggacgaggcgcaggagaggctcgccgagatcgaggaggcggcgcgcgtcacggccaccggcaacggcaaggccgtgtggcgcgagctcctgaggccgtcgccggtgatccgccgcatgctggtgaccggcatcggcgtgcagctcttccagcagatcaccggcatcgacgcgctggtctactacagcccgacgatattccgggacgccggcatcaccaccgagagccagctgctcgccgccaccgtcggcgtggggctctccaagacggtgttcatcgtgatcgccatcgtcctcgtcgaccgcgtcgggcggaagccgctgctgtacgtcagcacggccgggatcaccgcgtgcctggccgcgctcgccgcgtcgctctccctgctcgcgcacggcgcgctgccgcgggcggcggcgatcggggcggccatcctgacggtgtgcggcttcgtggcgttcttctcggtggggatcgggccgatcaacatggtgctgagctcggagatctacccgctgcggctgcgcgcgcaggcggtggcgctcggcttcgccgtgaacaggctgaccagcggcgcggtggccatgtcgttcctgtccatctgcggcgccgtgtccgtcgcgggtgccttcgccgcgttcgccgccatctcggcgctgtccgtggtgttcgtccacgtgttcgtgccggagatgagcggcaagtcgctggagcagatcgagtccctgttcggcgccggcgccggcgccggcgaggtggagctcggtgacgcggaacatctggtacaagggaaagaaatgagctga</cdnaseq>

Protein Sequence

<aaseq>MGLRATEAATGNGGGMRSLPDFLGRKSKYVRMDDVLPDEQGDGG GGGGVVRVRGGGGSGRYVFACSVFASLNHVLLGYDVGVMSGCIIFIQKDLHISEVQQE VLVGCLSFISLLGSLAAGRTSDAVGRKWTIGLAAAVFQAGAAVMTLAPSFAVLMMGRL LAGIGIGIGIMVAPVYISEITPATLRGSYASFPEIFISLGILLGYVSNLAFSGLPDHI NWRVMLAAGIVPSISVAFVLLVIPESPRWLVMQGRAAEARAVLLKVTDGEDEAQERLA EIEEAARVTATGNGKAVWRELLRPSPVIRRMLVTGIGVQLFQQITGIDALVYYSPTIF RDAGITTESQLLAATVGVGLSKTVFIVIAIVLVDRVGRKPLLYVSTAGITACLAALAA SLSLLAHGALPRAAAIGAAILTVCGFVAFFSVGIGPINMVLSSEIYPLRLRAQAVALG FAVNRLTSGAVAMSFLSICGAVSVAGAFAAFAAISALSVVFVHVFVPEMSGKSLEQIE SLFGAGAGAGEVELGDAEHLVQGKEMS</aaseq>

Gene Sequence

<dnaseqindica>1..235#624..1996#atggggcttcgtgccaccgaggcggcgacgggcaacggcggcggcatgaggagccttccggatttcttggggaggaagagcaagtacgtgcgcatggacgacgtgctcccggatgagcagggagatggcggcggcggcggcggcgtcgttcgtgtccgcggcggcggcggcagcgggagatacgtctttgcctgctctgtcttcgcctccctcaaccatgtcctgctcggctacggtgagcccctctcctgaatttgactgttcttgattcagatttggttgtattacacataatcaggggtttattttctgattaaagcaagatttgcagctagtaaaatatggggattgtatgtcatgttaatatgcttttagaagatgaagtgtttgaaaagttatcatcactgacagcccactctgcttcagattcagatgaaatgtaaattttgaccggtaatttggttcagatacttgttatggttgttaatctttatctgagtctctctctcagacagccattgacattgtttgtctcgtgaacaatcgatcaaactttcaaatggatgaaatatctttgcacaaattgtcaaatcctgtgttacatcgtggctgttaattttcagatgttggtgtgatgagtggctgcatcatattcatccagaaggacctccacatcagtgaagtgcagcaagaagtgctcgtcgggtgcctcagcttcatctccctcctcggcagcctcgccgccgggaggacgtccgacgccgtcggccggaaatggaccatcgggctcgccgctgccgtgttccaggccggcgcggccgtcatgacgctcgcgccgtccttcgccgtgctcatgatgggccggctgctggccggcatcggcatcgggatcgggatcatggtggcgccggtgtacatatcggagatcacgccggccacgctgcgggggtcgtacgcctcgttcccggagatcttcatcagcctcggcatcctcctcggctacgtctccaacctcgccttctccggtctccccgaccacatcaactggcgagtcatgctcgccgccggcatcgtcccttccatctccgtcgcgttcgtgctgctggtgatcccggagtcgccgcggtggctcgtcatgcagggccgggccgccgaggcgcgcgcggtgcttctcaaggtcaccgatggcgaggacgaggcgcaggagaggctcgccgagatcgaggaggcggcgcgcgtcacggccaccggcaacggcaaggccgtgtggcgcgagctcctgaggccgtcgccggtgatccgccgcatgctggtgaccggcatcggcgtgcagctcttccagcagatcaccggcatcgacgcgctggtctactacagcccgacgatattccgggacgccggcatcaccaccgagagccagctgctcgccgccaccgtcggcgtggggctctccaagacggtgttcatcgtgatcgccatcgtcctcgtcgaccgcgtcgggcggaagccgctgctgtacgtcagcacggccgggatcaccgcgtgcctggccgcgctcgccgcgtcgctctccctgctcgcgcacggcgcgctgccgcgggcggcggcgatcggggcggccatcctgacggtgtgcggcttcgtggcgttcttctcggtggggatcgggccgatcaacatggtgctgagctcggagatctacccgctgcggctgcgcgcgcaggcggtggcgctcggcttcgccgtgaacaggctgaccagcggcgcggtggccatgtcgttcctgtccatctgcggcgccgtgtccgtcgcgggtgccttcgccgcgttcgccgccatctcggcgctgtccgtggtgttcgtccacgtgttcgtgccggagatgagcggcaagtcgctggagcagatcgagtccctgttcggcgccggcgccggcgccggcgaggtggagctcggtgacgcggaacatctggtacaagggaaagaaatgagctga</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0679000, RefSeq:Os04g0679000