Os04g0679600

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Revision as of 11:35, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0679600| Description = CBS domain containing protein| Version = NM_001060816.2 GI:297603580 GeneID:4337422| Length = 1402 bp| Definition =...")
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Gene Name

Os04g0679600

Description

CBS domain containing protein

Version

NM_001060816.2 GI:297603580 GeneID:4337422

Length

1402 bp

Definition

Oryza sativa Japonica Group Os04g0679600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:35106439..35107840

Sequence Coding Region

35106545..35107415,35107494..35107819

Expression

GEO Profiles:Os04g0679600

Genome Context

<gbrowseImage1> name=NC_008397:35106439..35107840 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:35106439..35107840 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtgctgcaatctcacgatgtatcggatctctgcatcggcaagccgccggtgaggtggctgccgccgtcctccaccgtcgccgatgccatcgccgagatcgaggccggcggcggccggggtccggacgctgccgtcgccgtgtgggacgggacgaagggggaagtggatggcagggtgtgcatggccgacgtgcacctcttcctctgcggcggcgacggcgaggcggccagcctggcttccccggccgccgcgcttcaggccacgctctccgacctcctcgccgccggcgcgccgcccgtccgccgcatcgagccccacgcgagtgtggtggaagcggtggacgccttcttggacggcgcgcactgcctcgtcgtgccgatccgggagcggtggcggcgcgcggcggcggcgggggagatgtgcatgtgctggctcacggtggaggacgtcgtgcgcttcttcgtcggctgcatcggcctcttcgccccgacgggcctcgctctgcggtttctcagctcaggcatcagtccgcgaggccacgctcccgtcgccgccggcgacagggcgctctccgccgtgccgctcctcagcgccgcgctggcgacgcactcctccgtcgccgtcatcacgggcgcaggcatcgccccccgcctcgccggcgaggtgtcgccgtcggcgctctgctcctgcgacgtatccgtcgcggcggccatcgccgcgctctcggctggcgacctcacggccttcctccaccgcagcgacctccggtgccgccgcaacctccccggcatggtcgacctcctgtacgccggcgacccttcgtcgtggcccccctccccctcctcctcttcctcctcctcgtcgtcatcgtcgtcgttatcctccttctcgtcttcctccgacgacgaggcggaggacgggtacaaacactatgcgccagcgccgtgcgcgcggcgagacaacaacaggcagatcatcgcgtgccacccggggagctcgctggtggcggtgatggcgcaggcggtcgcgcaccgcgtgacgcaggtgtgggtggtggacttcgacgacggcgagctggtcggcgtcgtccgcttcctcgacgtgctctgggttcttcgcgaacacctcaaccaaccacccctgatctacccatcgaatttctcatcaattaatcccagtactaagcttcgttga</cdnaseq>

Protein Sequence

<aaseq>MVLQSHDVSDLCIGKPPVRWLPPSSTVADAIAEIEAGGGRGPDA AVAVWDGTKGEVDGRVCMADVHLFLCGGDGEAASLASPAAALQATLSDLLAAGAPPVR RIEPHASVVEAVDAFLDGAHCLVVPIRERWRRAAAAGEMCMCWLTVEDVVRFFVGCIG LFAPTGLALRFLSSGISPRGHAPVAAGDRALSAVPLLSAALATHSSVAVITGAGIAPR LAGEVSPSALCSCDVSVAAAIAALSAGDLTAFLHRSDLRCRRNLPGMVDLLYAGDPSS WPPSPSSSSSSSSSSSSLSSFSSSSDDEAEDGYKHYAPAPCARRDNNRQIIACHPGSS LVAVMAQAVAHRVTQVWVVDFDDGELVGVVRFLDVLWVLREHLNQPPLIYPSNFSSIN PSTKLR</aaseq>

Gene Sequence

<dnaseqindica>426..1296#22..347#gctgtacgtgtgtatcgttgcatggtgctgcaatctcacgatgtatcggatctctgcatcggcaagccgccggtgaggtggctgccgccgtcctccaccgtcgccgatgccatcgccgagatcgaggccggcggcggccggggtccggacgctgccgtcgccgtgtgggacgggacgaagggggaagtggatggcagggtgtgcatggccgacgtgcacctcttcctctgcggcggcgacggcgaggcggccagcctggcttccccggccgccgcgcttcaggccacgctctccgacctcctcgccgccggcgcgccgcccgtccgccgcatcgagccccacgcgaggtcgcgcgcacgccacgtgtatcgatcttgaccgccggcgccacatgcgtttcgtctgacgaaatttgttggttacagtgtggtggaagcggtggacgccttcttggacggcgcgcactgcctcgtcgtgccgatccgggagcggtggcggcgcgcggcggcggcgggggagatgtgcatgtgctggctcacggtggaggacgtcgtgcgcttcttcgtcggctgcatcggcctcttcgccccgacgggcctcgctctgcggtttctcagctcaggcatcagtccgcgaggccacgctcccgtcgccgccggcgacagggcgctctccgccgtgccgctcctcagcgccgcgctggcgacgcactcctccgtcgccgtcatcacgggcgcaggcatcgccccccgcctcgccggcgaggtgtcgccgtcggcgctctgctcctgcgacgtatccgtcgcggcggccatcgccgcgctctcggctggcgacctcacggccttcctccaccgcagcgacctccggtgccgccgcaacctccccggcatggtcgacctcctgtacgccggcgacccttcgtcgtggcccccctccccctcctcctcttcctcctcctcgtcgtcatcgtcgtcgttatcctccttctcgtcttcctccgacgacgaggcggaggacgggtacaaacactatgcgccagcgccgtgcgcgcggcgagacaacaacaggcagatcatcgcgtgccacccggggagctcgctggtggcggtgatggcgcaggcggtcgcgcaccgcgtgacgcaggtgtgggtggtggacttcgacgacggcgagctggtcggcgtcgtccgcttcctcgacgtgctctgggttcttcgcgaacacctcaaccaaccacccctgatctacccatcgaatttctcatcaattaatcccagtactaagcttcgttgatgtacatacgaggacaaaaattgcgaccatgaactgaaccttttgttcatcttaaatttacgccatgtgtttcgtcggcggatgaacttgaaacgaaggaagagtc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0679600, RefSeq:Os04g0679600