Os04g0680000

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Gene Name

Os04g0680000

Description

Transcription factor Tfb2 family protein

Version

NM_001060819.1 GI:115461367 GeneID:4337426

Length

5260 bp

Definition

Oryza sativa Japonica Group Os04g0680000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:35125306..35130565

Sequence Coding Region

35125306..35125418,35125511..35125678,35126296..35126364,35126855..35126977,35127026..35127200
,35127822..35127881,35127979..35128047,35128520..35128603,35128908..35128993
,35129589..35129679,35129759..35129839,35129921..35129995,35130122..35130230
,35130534..35130565

Expression

GEO Profiles:Os04g0680000

Genome Context

<gbrowseImage1> name=NC_008397:35125306..35130565 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:35125306..35130565 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccgcaggtaatggtggtcgcgcggaacttcatggacatggtggccgcgctgccggccgccaagctcgacatgctctacgactccgccttcatctgcgaggccgtgctcaggtcgctcccgccgctcgcgaagaagtacgcgctgcagatgctgtacgtgtcggcgccggtggccgctgcggccatggaggagtgggtgctcgacgagtacgccgccaagcacagggtcgccatcgataggctgctccaactgagggtatttgtcgaggtgcgcgatcgaagaaaggaggtgagctacaagatgaaccagaagttccagggcaacatgcaaaagtatttggttgatggtggaagtttaccaagggaacctataccatcgagtgtcactgcaaggttgcctacattggcagaattagagtcttttgctcttgagcagtgggaggtcaggatgacaaaagcttatgtttgcatatcgtactgtttgaatgctaccaatgttcactcccctagtaaaggaactcattcttttctctatgggaaaatagtgcttcttgctgcaattgatcaactcatctcaagtcgagagagggacaagtttcagctcatccatgatgagaacttttcagcgaggtcttctgagttcaagctgatggagacaaatgctcaactttggtacatcatgagagaatacatctcatcagcagaggaacgtggtgtggaccccacggagttgatatcatttctattggaacttagttttcatacattaggagaggcttatagcttgaatactctgaccgatgtccaaagaaatgctattagggatctggcggagttgggactggtcaaacttcagcagggttttgtagttgtggagacaaatttccggatgtatgcgtactcaacttccagattacattgtgaaattctgcgccttttttcaagagtggagtatcaacttccaaacctaattgtgggatctattacaaaagaaagtctttatggtgcttttgagaatgggattaccgctgaacagataatttcattccttcagcagaatgctcatcctcgtgttgctgacaagatacctgcagtcccagagaacgttacagatcagattaggttgtgggaaacggatcgtaacagggttgatatgaccctatcgcatttatatgaagattttccaagcaaggatatgtttgatcaatgctgtgattatgcaagagatcatgggtgcttgctgtgggaggatgcgaagaagatgagattaattgtacgagtggagttccattcagaaatgcatgattactccgtgcaagagaggagcgattag</cdnaseq>

Protein Sequence

<aaseq>MPQVMVVARNFMDMVAALPAAKLDMLYDSAFICEAVLRSLPPLA KKYALQMLYVSAPVAAAAMEEWVLDEYAAKHRVAIDRLLQLRVFVEVRDRRKEVSYKM NQKFQGNMQKYLVDGGSLPREPIPSSVTARLPTLAELESFALEQWEVRMTKAYVCISY CLNATNVHSPSKGTHSFLYGKIVLLAAIDQLISSRERDKFQLIHDENFSARSSEFKLM ETNAQLWYIMREYISSAEERGVDPTELISFLLELSFHTLGEAYSLNTLTDVQRNAIRD LAELGLVKLQQGFVVVETNFRMYAYSTSRLHCEILRLFSRVEYQLPNLIVGSITKESL YGAFENGITAEQIISFLQQNAHPRVADKIPAVPENVTDQIRLWETDRNRVDMTLSHLY EDFPSKDMFDQCCDYARDHGCLLWEDAKKMRLIVRVEFHSEMHDYSVQERSD</aaseq>

Gene Sequence

<dnaseqindica>1..113#206..373#991..1059#1550..1672#1721..1895#2517..2576#2674..2742#3215..3298#3603..3688#4284..4374#4454..4534#4616..4690#4817..4925#5229..5260#atgccgcaggtaatggtggtcgcgcggaacttcatggacatggtggccgcgctgccggccgccaagctcgacatgctctacgactccgccttcatctgcgaggccgtgctcaggtgcccactccgcgccggccttgcccttggctgcggcgatgcgtttccgtgctgtatttcatcgcgagtgttttcgccacttcgttgtgcaggtcgctcccgccgctcgcgaagaagtacgcgctgcagatgctgtacgtgtcggcgccggtggccgctgcggccatggaggagtgggtgctcgacgagtacgccgccaagcacagggtcgccatcgataggctgctccaactgagggtatttgtcgaggtgcgcgatcggtaaggcctcatccatctccaccagcgctgggtgcttcaagtgcgccgcagacttgcaacttcctctatagatcagaagtcgatgaaccaactgtataatttcaatccagaatgtcagatttctggtgctaattttgccttagtggtttgccagcgctgtctttggcatgccggggggcctgatatgttatcatatatgtcaacttactgaaattttggtgtaactgtttggccctaaggatgctatgcaactagtaatgcttttatttattgtaaaaaggaaacagcaatatatttggcatgccacatttggtctgcaaagtgcaaactcttaaggtgaaatatgcaacagcattaagaattatgaatcaatgttggcatgagaagaaaccatcatgatgattatacccttggacgtgaacaagttttattcagctctagttggggtagtcgattatttttagctaattatactgctggaacatcaatttcatgtgtactttgtcacatgttctgtttcttgcatgtgcagaggcatagctaatatgaatcttatagcttactcagtttatgaattactttaattttactacatagtagactatgtttttctacagaagaaaggaggtgagctacaagatgaaccagaagttccagggcaacatgcaaaagtatttggttgatgggtaagttttagtaactactgagctacttttactgaaagccacatacttttctcatattttgagctaattgccttttccccgtcgaaactttatgatagtgtaagcatgtgctttatttccttatatatattatgtacaactcttaatattgtagagtaatccttactatatactccggcataccgttgcatgtatagaaaaatttctcctgcacacattacatgtagaaaatgaaaaagccacaatgtggtagcaatagggtggaaatagttcacaaatttaccgatgattgcactgaagaacagtaaaatcaaattgactaatttgtataaaaataaattactgtatgttacatgtttcatgttattcagttatttttcctgtgtgggcagcctgagctaataattaaagctttattgccatgtattttgttctgcgtgttgtagcatatcaaactagttgacgacattacagttttatttttctgcagtggaagtttaccaagggaacctataccatcgagtgtcactgcaaggttgcctacattggcagaattagagtcttttgctcttgagcagtgggaggtcaggatgacaaaagcttatgtttgcatgtatattttattttagggaaacactttctatctttttttgctcatcagatcgtactgtttgaatgctaccaatgttcactcccctagtaaaggaactcattcttttctctatgggaaaatagtgcttcttgctgcaattgatcaactcatctcaagtcgagagagggacaagtttcagctcatccatgatgagaacttttcagcgaggtcttctgagttcaaggtccatcttatttcctcccttgcttttggcagtgagttatgcataaaatacggacaatcaaattttgtaacaacaacaaagaatatgcagattgctgtagctctttcttttgttagtacaattagatgataaatccaatggctgtagctacatagatatacactaagaagaactagcaactactatacccaagatggtgtgggctgacagcagatggtcattggttaattggtttggtttatctgtgttcagtttacctgtaagtgaaatggggctgattggtctcttagtaatcctaataatccatcttttagcaggttgctttttttatttggatagttcagatttgcaccacatttctggaattttaaaagctactagagtttttttgccctgctatatattctctagctttattgtatatgctttcctcattgcatattcaaacaacaactgaacgatagagttcctgatctgatatattctgcagagatggtgaagctccaagattaactgagaacgggttccagtttctggtgtgtcattggctatcagttgatccaattatctaacagactgcagacttctatatttgtttctcactcttttctatttaaccagctgatggagacaaatgctcaactttggtacatcatgagagaatacatctcatcagcagaggtatcggttgcttgctctttctagagcttttgatgttacattgttgatttatttgttgtatttcctttgtgctgattgttttattactgttgaataggaacgtggtgtggaccccacggagttgatatcatttctattggaacttagttttcatacattaggagaggtaagttaaccacttttaaaagactgtggtgatgcttctttttttttcaaaaatcgttttaaaaagtgaccagctccagtttttcttttacagaaattaaaatataatttccctcaataatagtaggttatattgatataagaaataaacacggccacattttacgcagattatagtttatgagaggattgggtaaattgtagtggtatatgaaacggagcatctcaaagattttctattggtttctgatctatctaacagaatagggacatcaatctaacatgcctgcttaataatgcttactagttcagacagtaccagagatttagtgcttaaaaagaggttatcagtctgtagattaatgttattaactaagcattatctttcatctgttgtggagtccaagctttgtggcctggttcatctgttgcaaattcgcttcaacatgctgtttaacttattcatgcttcaggcttatagcttgaatactctgaccgatgtccaaagaaatgctattagggatctggcggagttgggactggtcaaacttcagcaggtaaaactttgatttagtcttttccctagtcaacttgatgaatacaaatgtcaagagttaagccatggcagggtcgaaaggacagctggttcatacctacaaaactggctacaaatctctcagcaagcttgtcagattcatcgtctaacaaagaggtttcagaacattttatatccttgctattacagttattcatgacgtccaaatctttcataacctcaatctactcgtcacctaagcaacaacaaatgaagatgaaaatactttctgttaataattacattgtatgatgttggtgctgtagggttttgtagttgtggagacaaatttccggatgtatgcgtactcaacttccagattacattgtgaaattctgcgccttttttcaaggtacgtgtggtgctagatgattggcataacttagctcaactatgtactggttttttaactactgaattactgatccatagcttctgttgcatccttgaacgactttcctctatttattattaacattttgccatatgtttggcatgcaaaagagcgacggcagggagctaagggctctatacccttcatcacattttctttagttaaccagcgtaactctgccaattgtcatgcgagtatatgccataatcttgatttttggctatgctctagtagaatggtgattggtcactgctgtttcagtgactgataccgtttatcttggttgagtagatgccttcatcttgactgaattgactcaggaatgccaactgtttcactggaatccagtactaaatcaaggtagtaggaaacacaatacagtgaagatgactgtattaataactgtgttgtaagtaatattgcttattaattttacaggacacttgcttaaggttttattaaaatgacagtaatagtggcgactgtagattttaccttatattactgtcatcctccattcttcattgaatgttcaataaggatatttttgcagagtggagtatcaacttccaaacctaattgtgggatctattacaaaagaaagtctttatggtgcttttgagaatgggattaccgctgaacaggtatcacttggagtatgaatttctgcatgatccattatatagatactcagagtcattcttgttttgtgttgtttttcagataatttcattccttcagcagaatgctcatcctcgtgttgctgacaagatacctgcagtcccagagaacgttacagatcaggtacaactgaacaaggcaatgttttcatccatggccaaccgtatttgccaaagtaattgaattggtaattcctccatgcagattaggttgtgggaaacggatcgtaacagggttgatatgaccctatcgcatttatatgaagattttccaagcaaggtaaagcccagcatatttaacttggaaatagtactgggacaatattgagttgcttataccatgttggtgtgtgcttttcatattagtgtaaacgctaacatatttattctactgttgcttgtgcaggatatgtttgatcaatgctgtgattatgcaagagatcatgggtgcttgctgtgggaggatgcgaagaagatgagattaattgtacgagtggagttccattcagaaatgcgtgagttcctccggaggctaagataaatcaactatagtttgcataatttattcaatctatgtactcctatattcctgcacagtaagaactttatcaatgactgttgtgcaccaatttggcccattgtcacacatgaatatatccactggctgcatcatgttaaggagttggaactcgctgaacttttgagttaactgctgttaccctgtttattattacggagtgctccatccgtccagtccaaattagttgttttaggatagatcacattttattctagatatttttctttacttattctagatgattactccgtgcaagagaggagcgattag</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0680000, RefSeq:Os04g0680000