Os04g0680400

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Revision as of 11:35, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0680400| Description = Similar to Allantoinase (EC 3.5.2.5)| Version = NM_001060821.2 GI:297603584 GeneID:4337428| Length = 4695 bp| Defin...")
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Gene Name

Os04g0680400

Description

Similar to Allantoinase (EC 3.5.2.5)

Version

NM_001060821.2 GI:297603584 GeneID:4337428

Length

4695 bp

Definition

Oryza sativa Japonica Group Os04g0680400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:35137888..35142582

Sequence Coding Region

35140089..35140091,35140510..35140635,35140893..35141048,35141138..35141248,35141454..35141564
,35141769..35141867,35142045..35142173

Expression

GEO Profiles:Os04g0680400

Genome Context

<gbrowseImage1> name=NC_008397:35137888..35142582 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:35137888..35142582 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggaggaagcagcgatcaaagatctgcaacgtgcgatgaaagacacggagatagggggtcggtcagaaggagctcatattcacatagttcatctctcagatgcaaaacttctcttgggcttcttaaggatgcaaaacaaaatggtgcaagggttagtgtagaaacctgtcctcattacctggcgttttcagctgaagaagttcctgatggagatactcgctttaaatgtgctcctcctatacgcgattcaaccaacagagataatctctgggaagctctgcttgatggacacatagacatgttgagctcagaccattcaccatcagctcctgatctcaaactcatggaggaaggtaacttcttaagggcatggggaggcatatcatctttgcagtttgttctccctgtaacatggtcgcatgggaaaaaatacggtatcagtttgaatcaactggcatcatggtggagcgaaaggcctgctatgcttgcagggttaaagaaaaagggtgctgttctgccgggataccgtgctgatattgtggtatggaaacctgaggctcaattccatcttgatgacagccatcctgtctaccataagcatcggaatatttcggcatatttgggaaagcagctttcagggaagatactgtccacctttgtgggtgggaatcttgtgttcgctgaagacaaacatgcaaaggctgcatgtggtgctccaatcctcgccaaataa</cdnaseq>

Protein Sequence

<aaseq>MGGSSDQRSATCDERHGDRGSVRRSSYSHSSSLRCKTSLGLLKD AKQNGARVSVETCPHYLAFSAEEVPDGDTRFKCAPPIRDSTNRDNLWEALLDGHIDML SSDHSPSAPDLKLMEEGNFLRAWGGISSLQFVLPVTWSHGKKYGISLNQLASWWSERP AMLAGLKKKGAVLPGYRADIVVWKPEAQFHLDDSHPVYHKHRNISAYLGKQLSGKILS TFVGGNLVFAEDKHAKAACGAPILAK</aaseq>

Gene Sequence

<dnaseqindica>2202..2204#2623..2748#3006..3161#3251..3361#3567..3677#3882..3980#4158..4286#acgcagaaaaggacaggaggtctcgtcacgagcgcgaggaggaggaggaggaggacgacgatggcgatggcggcggcgaagggcagggtcctgccgctgctggcggtggcggcggcgctcgcggcggcgctcctctaccgcgcgcccttttccaaggtctccgggagattccctttcccccggtattcgaatctgcgatctcttctctcgtacgagaaagctgaggagaatccctttgtctttgcagagcctgggcggtgaggggtgcagccttctcccccacgaccacttctggatcgccagcgagcgcgtcgtcacgctcggacgggtcaggccccgccgcaggtgatgacctcgatcgacgacaagtggactgattgattattactctgatgatgatagagcagttgaatgctttgggttttcagagtgagcgagtccatgtcgctgacggattcttcttgttgtggattgtgtgtgtctgtgtgtgtgtgcagtggaggtgaagggagggctgatcaacgcgatcgccgtcggggattaccggagcttcctgctccggcgaccggtggtggactacggtgacgcggttatcatgcccggactgatcgatgtgtaggcttcgatctctagcgacttgccagaatcaatcacttatacgaacgattgcttgaaactagtggtgtgactgcactgcactgttctgatttcaggcacgcgcatcttgatgagccaggacgtgctgagtgggaggggttctccactggtacaagagcagcagctgcaggtgcagctttttatcagtcattatcaatctaaatcaagttaaccctcattaacgtgttggcttgtcaatctaaataaagttaatccttgcgtactaatgtcggggatgctctaaataaggcacgtttcttagttcttatccctctcatgtgggatgcattctgaattcggtacggcaacatccctcgcatatggtgggatgtgttctgaatactatactgccactgggactgttgttttatcattttcgtattcttggattgagacatgagaccgagttagtagggagtaatcaattttctttttcttttcaataacagaaagagatcagactttttgctcaaagtttcacggtttgttcatttcaggtggcattacaacattagtggacatgcctcttaatagctacccgtcaactgtttctgaagaaactctcaagctgaaggtcagtgtttctttatcgtaccaatatcagtatataaagcatcaaattgctactacctgctttctctttagtcaacactgacattacgtgcttgattatcagttggatgcagctaaggataaactacatgttgatgtaggtaagttgcaatgcaatagttacacgtttcagtatcattgcacattagcaagtagagaaccaagggaggtaaaaacagctcatccaccataataacagtaattctgcatctaaacttgtttcatggtccgaccttttttgacttgtctgctgttctcaaacagggttctggggaggcctcgttccagagaatgccctcaatccaagtgcactagagagcctattaaatgcaggcgtcttagggctcaaggtttgttcatacttacaagagtaatcactcaacttctgttgttctacatgtttattcatcttctcaacttgttaaagaagccttagtttcaggcatgcaaagctccaaagtaagtttggttagtactaggatcccacaggtttattcacgtccttttcatgtcattgtaacgtccttatcatgccatcatgtcactctgtttattctattttactttaaataagcaaatgatagaatgatacactgattgatcttttttttcttgatttagtcatttatgtgcccctcaggtataaatgacttccccatgacaaattcaactcatattgaggtgcgctgctttgacaattctgttatttattaccttgcgaccacaagagttccataattcagcttatcaactccctgaagagttcatattcctgtttttgtactgtaggagggcctggttacattggcaaagtacaaaaggccgttacttatccatgcagaacgcatacccgatgttcagaatgaagatgggatcgatggtgaactagatcctaaagcctatacgacatatcttaaatctagaccaccagcatggtaatttgagtcagttattgcctgagttattgcactcagtccttggcataggccggtctggctgagtgcgtcgtgtaacaaaaactctattcttctaatatattgacgtgcaatccttttgcgcgttcgcgaaaaaaaaattgcctgagtgaatcatagtctagtctgtgtgttaatcagaatgcacaattctgattttaaactatatggctgtctggaaagcatatgtacaacaaatcaatgagaataccatggcattatgctgttttagtacatagtatgcaatcgtgtaaaaaaagcttaaccaatagccatcactgaaaagaaccgaagtactcacaacttaacaccttttttttttccttttgagctgatcacaacttcaaacttcactaattctattgccatttatatctagggaggaagcagcgatcaaagatctgcaacgtgcgatgaaagacacggagatagggggtcggtcagaaggagctcatattcacatagttcatctctcagatgcaaaacttctcttgggcttcttaaggtatgatgtcattatcaaatggacagaccagaacgtattaatgattcatctgtttttgtgaagtcatgaaagaaagttctgtctcaaccaaacaaaagaatattatattcacaatcgccgagaacattttacattgcttatctaaactgattatttattgttgatgaaaaagcttatgcacagtggagtacgatttattcaaatgacttatggttttcttggtccatttattactccaattttttatatggttgtaggatgcaaaacaaaatggtgcaagggttagtgtagaaacctgtcctcattacctggcgttttcagctgaagaagttcctgatggagatactcgctttaaatgtgctcctcctatacgcgattcaaccaacagagataatctctgggaagctctgcttgtacgccattcttcttattatgattggtttgttgaactttactaaactgttataggctaactggccaactattatatggctaacattaggatggacacatagacatgttgagctcagaccattcaccatcagctcctgatctcaaactcatggaggaaggtaacttcttaagggcatggggaggcatatcatctttgcaggtaagttttttagtgcatatgaataaatgtaccgtgccaagagtgccaagtaacgattttattttcccctaatcttaatacaaattggtcaacgttccaccgctggcccgtgaaaaacattttgagtaaaatcataatggtgaagtgtgaaggcctccagattgtgcttgcatagtagtaattagtttggtatgaacatttgcagtttgttctccctgtaacatggtcgcatgggaaaaaatacggtatcagtttgaatcaactggcatcatggtggagcgaaaggcctgctatgcttgcagggttaaagaaaaaggtaatgggctaatgtcatcttttttagcaaaatgcatggcatcattgtgccatactactgttcttactggatgacacttgtgtaacttaaaaccagctaatggttatgattaatgttttcatctttgtttatatcatcatctgttgtctcactcgatacagtacatgctgatattgctaaaaagaaattaaactcaatttgtagggtgctgttctgccgggataccgtgctgatattgtggtatggaaacctgaggctcaattccatcttgatgacagccatcctgtctaccataagcatcgggtttgctttctaactcgaacccgttagaattccacttgtttccatataaaatgtcggaccatgtggaacttttgacctcttcctcaacaatcagctagaaaatgctacaaattgaagatcacattttatatgtgaagtctggattctatgtgtaaagtttatttcacatttttgcagaatatttcggcatatttgggaaagcagctttcagggaagatactgtccacctttgtgggtgggaatcttgtgttcgctgaagacaaacatgcaaaggctgcatgtggtgctccaatcctcgccaaataaaattcaggtgtagtagtgagatgcttctgtttagctcactgcacacaagtatcgaaaatatttatgttaatacatattgctcctgttcttgtctttcaggtggatccagtgcttacagttgttgatttgtagtgtatatgatcgtatgcgctacacattttgatttgcggcaaaactgcaaatggcaatgtccctgtgtgtataatttagcccggctcttccattgttatataccactctccattcgattgtgctacattgtacttcatgtggacagcgtatagtgattgtattttttatattattcagatactcctgtaatctagtttacgtggaagtgtaattcagttactttatcagctgtttatgtagatgaactggaataataaacgcgtgatgttagaaatgc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0680400, RefSeq:Os04g0680400