Os04g0681500

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Revision as of 11:35, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0681500| Description = EF-Hand type domain containing protein| Version = NM_001060825.1 GI:115461379 GeneID:4337432| Length = 2850 bp| Def...")
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Gene Name

Os04g0681500

Description

EF-Hand type domain containing protein

Version

NM_001060825.1 GI:115461379 GeneID:4337432

Length

2850 bp

Definition

Oryza sativa Japonica Group Os04g0681500, complete gene.

Source

Oryza sativa Japonica Group 

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:35187232..35190081

Sequence Coding Region

35187355..35187644,35187737..35187978,35188970..35189072,35189181..35189244,35189362..35189525
,35189616..35189709,35189815..35189952

Expression

GEO Profiles:Os04g0681500

Genome Context

<gbrowseImage1> name=NC_008397:35187232..35190081 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:35187232..35190081 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgggcgcggcggcgatggccctgttgctctcgaccagcgtgctgctcgtcctgtgccttctccccgtcgacccggctgccccgccggtcgccgccatcccgcaccgccgatcggggcgccacgacgtgccgttcggccgtcacgccgcgttcggcccgttcgccaccgaggtcgagctgctgctccacggcggcggcgccgtcccggacatcaggacgtgccgcgacacgctcgaccgcctccccgactggtcccacttcgacgccgagctcggccccctggaacggtacttcgggtcggacggggagctgaacgtgaaggagcggctgctgtacctgttcccgatgctggaccgggcgcccaaggacggcggcgtcagctgcggcgagctggaggcctggctgcgccggcaggcggcggaccgtctcgacgccgtcgcgcggagggagctcaagaggcacgacaaggacggagacggcgtcgtcacgctgcgcgaatacctcgccgtcgaccacgatcaacacattgattggaccgacacggagcacggcgaaccaggatggtggctgcataagttcataagcgcggatagagatcatagcggcgccatggacttcatagagctcaacgacttcttgcatccagaagatagcagccaggagaaagtgaaattatggctgttgaaggataaattaagtggaatggatcacgatagagacgggaaattaagtttggatgagtttatcagtcagtttcacatgatcgaccacaactccattgtagagcatagtgctgatgatgatactagttgtgctgaagctgagaagaagtttcgagagctcgattctaacaatgacggctatttgacagtggaagaagcacgtccagtaatccagagcctcatctcgggagagttttcatatgctaaatcacatgcaaagcttttgatgaaggctgatgataacaaggacaacaagttgtcactagaagagatgctgaaccactacctatctttctacaatattgtttacatggatgatcactatgactacgatgacattggcaacaatatccacgatgagcttaggtga</cdnaseq>

Protein Sequence

<aaseq>MAGAAAMALLLSTSVLLVLCLLPVDPAAPPVAAIPHRRSGRHDV PFGRHAAFGPFATEVELLLHGGGAVPDIRTCRDTLDRLPDWSHFDAELGPLERYFGSD GELNVKERLLYLFPMLDRAPKDGGVSCGELEAWLRRQAADRLDAVARRELKRHDKDGD GVVTLREYLAVDHDQHIDWTDTEHGEPGWWLHKFISADRDHSGAMDFIELNDFLHPED SSQEKVKLWLLKDKLSGMDHDRDGKLSLDEFISQFHMIDHNSIVEHSADDDTSCAEAE KKFRELDSNNDGYLTVEEARPVIQSLISGEFSYAKSHAKLLMKADDNKDNKLSLEEML NHYLSFYNIVYMDDHYDYDDIGNNIHDELR</aaseq>

Gene Sequence

<dnaseqindica>124..413#506..747#1739..1841#1950..2013#2131..2294#2385..2478#2584..2721#agccgaggcgggatcgatcttccaccgtgccgttgccagtgccaccgggggtgggtgagcaccgtcacggcgtcacctcccctcccctccctccggccggcatgacgatcgagggaaccatatatggcgggcgcggcggcgatggccctgttgctctcgaccagcgtgctgctcgtcctgtgccttctccccgtcgacccggctgccccgccggtcgccgccatcccgcaccgccgatcggggcgccacgacgtgccgttcggccgtcacgccgcgttcggcccgttcgccaccgaggtcgagctgctgctccacggcggcggcgccgtcccggacatcaggacgtgccgcgacacgctcgaccgcctccccgactggtcccacttcgacgccgagctcggccccctggaacggtgcgtgcgccgctcgccgcgctgcagaactcggtggtcttccacgcgcgcacgcggagtgcttgatgttttgcgcgcatggatggatgcaggtacttcgggtcggacggggagctgaacgtgaaggagcggctgctgtacctgttcccgatgctggaccgggcgcccaaggacggcggcgtcagctgcggcgagctggaggcctggctgcgccggcaggcggcggaccgtctcgacgccgtcgcgcggagggagctcaagaggcacgacaaggacggagacggcgtcgtcacgctgcgcgaatacctcgccgtcgaccacgatcaacacattggtacggacaactgtaattttagtgtcagtgtctgcacggtttttgttgacgcgtcgccacgctttaagcacgttatatgcagtccgcagcggcacccgacaacacgtcgtcgcaagggaggtagatgtaccgaatgaacacccaggagggaccccgtcagagtgaacgcgcgtcagtttatcctagtctcggcaggccagctagaacattctctaacatcatagagacgagagacgataagcaattgggggttgagaggtgaatagacttgggtacaagtagcaagaggaagggagatgtagaatgtagaggttagggcattcacaatgtgggaatatgggtgggtattacgacaccaaagtagacctcatacattgtgaggggatttttagggtggtctctagctaaagttgtccatatgcttatagcctgctcttatggcattaaaagaataaaaaataacttcactctctcaatgacaaagagaaaagaagagatggatggagagagaaacaacgattttttttaaaaagtgtgggtcccatcttaaggttggtcccaccttaataccaccctagtacatacacactgctgatgcccttatgggcaatagattgattttgatgattgattggttgttttttcaatctgccttagcctctatagttataggaggggtgatcttacgtttacatgactctttttcacgtttggaaagctttacaatcaagaaaaccctaagattaaggaaagaaaaatgaaaaaactcaattcgattcgaactatgtgctgaaggtctgaccgcccagacatacgtggtctgaccgtagtttattgtttggtctaaccggctatacattggcggtcagaccagtcttcacgggaaagctttggtatttttcatatttggtttgaacttgctataaatctaaactagtgccaaatttaagcgttaacaatttcattgggttatgagttattaactgcatagattggaccgacacggagcacggcgaaccaggatggtggctgcataagttcataagcgcggatagagatcatagcggcgccatggacttcatagagctcaacgagtaccacactcatttctgaacctttttttagattgttgagtacatcggaaattcaatagattaaactctcctaacccttggtctatgtgtgttgcatatatactatagcttcttgcatccagaagatagcagccaggagaaagtgaaattatggctgttgaaggataaattaaggcaagcagtgtccaaacacttgcatatacttataatgttgctaattacggtccactaatatgataaattgatgtatttgatttatctttttcatctgcatggatgcatggaatacagtggaatggatcacgatagagacgggaaattaagtttggatgagtttatcagtcagtttcacatgatcgaccacaactccattgtagagcatagtgctgatgatgatactagttgtgctgaagctgagaagaagtttcgagagctcgattctaacaatgacgggtaatacttgaaacagaagaaaatagcaccactttgtgtagtgaatatttgcaagataacccttttttactccacctttccccttttcagctatttgacagtggaagaagcacgtccagtaatccagagcctcatctcgggagagttttcatatgctaaatcacatgcaaagcttttgatgaaggtgactaactaaccataccaaatataactagtaagcaattttcactatttaattgataaccactataaactacctttttttttggcaaatatgataatgacataggctgatgataacaaggacaacaagttgtcactagaagagatgctgaaccactacctatctttctacaatattgtttacatggatgatcactatgactacgatgacattggcaacaatatccacgatgagcttaggtgacaaatttagccaagacggtatatataaactgttccctatgacaaacaaattatcatgataaaagctgtaaattatgacaaacaatatgaacgtgtacatatgggtaactacacgcgtaagtaatctgac</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0681500, RefSeq:Os04g0681500

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os04g0681500&oldid=17581"