Os04g0681900

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Revision as of 11:35, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0681900| Description = Similar to Acyl-CoA binding protein| Version = NM_001060827.1 GI:115461383 GeneID:4337434| Length = 2853 bp| Defini...")
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Gene Name

Os04g0681900

Description

Similar to Acyl-CoA binding protein

Version

NM_001060827.1 GI:115461383 GeneID:4337434

Length

2853 bp

Definition

Oryza sativa Japonica Group Os04g0681900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:35210522..35213374

Sequence Coding Region

35210785..35210952,35211276..35211373,35211467..35211558,35211825..35211931,35212114..35212219
,35212837..35213276

Expression

GEO Profiles:Os04g0681900

Genome Context

<gbrowseImage1> name=NC_008397:35210522..35213374 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:35210522..35213374 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggcggcgactggcaggagcttgcccaggcggcggtaatcggcctcctcttcgccttcctcgtcgccaagctcatctccacggtcatcgccttcaaggaggacaacctccgaatcacccgctccacgccgaccttcccctccgccgcggacacccccgccgccccggccccacctccggcctccctcgacggcggccatggggacaccagcgacggcagcggcagcgacagcgacagcgactgggagggcgtggagagcacggagctcgacgaggatttcagcgctgcctccgcgttcgtcgccgcctccgctgcgtctggcacgagcgtccccgagcaagcccagcttcagctctatgggctctacaagatcgccaccgaggggccctgcaccgcgccgcagccgtccgccctcaagctcaaggcccgcgccaagtggaatgcttggcataaattgggtgctatgccgacagaagaagctatgcagaagtacatcacagttgtggatgagctattccctaactggagcatgggttcgagcacgaaaaggaaagatgaagataccacagtatctgcttcaagttcgaagggaccaatgggacctgtatttagcagtttaatgtatgaggaggaagatcagggaaatgactctgaacttggcgatatccatgtttcagcaagggaaggagcaattgatgacatagcgaagcatctggctgctggtgtagaagtcaacatgagagatagtgaaggcagaactccactgcattgggctgtcgaccgtggccatctaaattctgttgagattcttgtcaatgcaaatgctgacgtgaatgctcaggacaatgaaggacaaacagcgcttcactatgctgtcctctgtgagcgagaagatattgctgagttgcttgtcaagcatcatgctgatgttcaaatcaaggatgaggatgggaacacggtgcgggagttatgcccttcaagctggtcttttatgaacctggcaaactga</cdnaseq>

Protein Sequence

<aaseq>MGGDWQELAQAAVIGLLFAFLVAKLISTVIAFKEDNLRITRSTP TFPSAADTPAAPAPPPASLDGGHGDTSDGSGSDSDSDWEGVESTELDEDFSAASAFVA ASAASGTSVPEQAQLQLYGLYKIATEGPCTAPQPSALKLKARAKWNAWHKLGAMPTEE AMQKYITVVDELFPNWSMGSSTKRKDEDTTVSASSSKGPMGPVFSSLMYEEEDQGNDS ELGDIHVSAREGAIDDIAKHLAAGVEVNMRDSEGRTPLHWAVDRGHLNSVEILVNANA DVNAQDNEGQTALHYAVLCEREDIAELLVKHHADVQIKDEDGNTVRELCPSSWSFMNL AN</aaseq>

Gene Sequence

<dnaseqindica>2423..2590#2002..2099#1817..1908#1444..1550#1156..1261#99..538#atcacccaagtcctcttctctcttctcttctccgccgccgcctccatccgcggcgcatcccatctcgccccggcgactcgtcggcgtcggcgtcggccatgggcggcgactggcaggagcttgcccaggcggcggtaatcggcctcctcttcgccttcctcgtcgccaagctcatctccacggtcatcgccttcaaggaggacaacctccgaatcacccgctccacgccgaccttcccctccgccgcggacacccccgccgccccggccccacctccggcctccctcgacggcggccatggggacaccagcgacggcagcggcagcgacagcgacagcgactgggagggcgtggagagcacggagctcgacgaggatttcagcgctgcctccgcgttcgtcgccgcctccgctgcgtctggcacgagcgtccccgagcaagcccagcttcagctctatgggctctacaagatcgccaccgaggggccctgcaccgcgccgcagccgtccgccctcaagctcaaggcccgcgccaagtggtagattcgatccccctgcctccctgatcttttttctcttctggatttagttcaagcatctgttagagtcgggctccgcttaacccccactgtttcagttcgagggtttagggaaatggatcgaaatttatcgttatctaagtttaggttcagttactgctagaattgctgatcacgaaatctggtggtaggttttttgtgctttgcactgaccagaggagactcataaattcctgtgtgttaatcttgtagctatgattcttgttagaaacttaactcattgttattgcctctaggtttacaggtttggttcattggaagtgaaatctcctggtagctcgatgatctcacaaatagtagcattcctcagtcagatgctgcaattcaacttacttttgcattatgttgtttgatttattgtttcctgacttcctttggtggttttgaatttacccttttgaatttggcactggagtctgaattaagatatctactgtttgcagctaacttttattaacatcatactgtttgtcttttgcgctgtctatctctgtcaattttaaagacttaatctagtttacaagtatcctaattttcatatggtgtcaatatccaaggaatgcttggcataaattgggtgctatgccgacagaagaagctatgcagaagtacatcacagttgtggatgagctattccctaactggagcatgggttcgagcacggtaattctcttatgtcctcttgtactgttcgtattttgctacttgggatcccatcactgtattggcttattttatagtctgctttacatgattcctgaaaaaaaaaacaccgctcaatttgtgctagttgggatcccatcactatattggcttatttgataatctgatttacatgatttcagaaaaggaaagatgaagataccacagtatctgcttcaagttcgaagggaccaatgggacctgtatttagcagtttaatgtatgaggaggaagatcagggaaatgactcgtaagttttcgacacgaagtatatcctgtacctttggtcttattattatgtgttaaaacggccttgattcaagttcagttaggtttgtatttgggcatcgtctcttatggctgataaatcatagcaaataacaatgacatgattaattatttcatgaagtatgcaactaattatctccatgttggtgctattaagcattatttattcagtcatctagttacatgacagtgtttccatgattgcaacaaacttatctgtaactgcagtgaacttggcgatatccatgtttcagcaagggaaggagcaattgatgacatagcgaagcatctggctgctggtgtagaagtcaacatgagaggtttgtgttctgaactgttcaccattatgttctctttgtagcttaggcttagcatagctcatctaagcatagtttcatttatgatggtttcagatagtgaaggcagaactccactgcattgggctgtcgaccgtggccatctaaattctgttgagattcttgtcaatgcaaatgctgacgtgaatgctcaggtacttgactctacctttaatgcttcactcagtgcattctagtagaattcacgcgctgataaagttggtgagtatgtaattggagcaagaagctggtaatatatcttggcgtggcattttcattgggattacattatgtactacattgaataaaaagttgctattcattgtggccatataatagtgtcaataaatatgagattgccacggctaggtactactagtggatatatattggtttgataggcactgcttccctgaaaaagtctaaacattataatgagatcaatgagcaacactgtccatgtcccttttatattcaggacaatgaaggacaaacagcgcttcactatgctgtcctctgtgagcgagaagatattgctgagttgcttgtcaagcatcatgctgatgttcaaatcaaggatgaggatgggaacacggtgcgggagttatgcccttcaagctggtcttttatgaacctggcaaactgacgacacgatgccctctgcactcttttggttgcctaccagcaagaaaccgcactgtctatgttagccaaactagatgagttgttttacgaacctcatcgaataggtcactgtcaaaaggatatttctgtattagtgaaaggagattatcttgtactgcctatacagtttacactgctagtttgtttgtgctgaacatcaatgttggccaggtctgtaaatcatgggcacctaatttctgaatgagcatgatcggacttctcttc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0681900, RefSeq:Os04g0681900