Os04g0682500

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Revision as of 11:35, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0682500| Description = Peptidase T2, asparaginase 2 family protein| Version = NM_001060832.1 GI:115461393 GeneID:4337439| Length = 3840 bp|...")
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Gene Name

Os04g0682500

Description

Peptidase T2, asparaginase 2 family protein

Version

NM_001060832.1 GI:115461393 GeneID:4337439

Length

3840 bp

Definition

Oryza sativa Japonica Group Os04g0682500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:35239363..35243202

Sequence Coding Region

35239417..35239644,35239911..35239961,35240261..35240381,35240468..35240552,35240953..35241034
,35241124..35241253,35241736..35241899,35242030..35242193,35242537..35242657
,35242731..35242832,35242937..35243026

Expression

GEO Profiles:Os04g0682500

Genome Context

<gbrowseImage1> name=NC_008397:35239363..35243202 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:35239363..35243202 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccggcggcgatggcggcggcggcgggggagacgagagcgagtttgtgggggtaggcggcggcggaggaggaggaggagaaggagaagggaaccagagcccccccaaccgtaggttcttcgtggccgtgcacgtcggcgccggcttccacgcgccggcgaacgagaaggcgtaccgccgagccatgaagcgcgcttgcctcgccgccgccgcagtgctccgcgagggaaatggcacaagccttgatgcggttgcagctgccattcaagtattggaggatgatcccatcacaaatgctggacgcggttcaaatttgactgagagtggtcatgtggaatgcgatgcaagtatcatggatggttctactactacctttggagctgttggagctgtgcaaggtgtaaagaatcccatccaaattgctttgcacttggcaagggaacagatggtaggaccttcactgcttggtcggataccccctatctttttggttggtgaaggagcatgccagtgggcaaaatcgaaggggttgaacctacctgaagccacatcagagggaaatagttggttggtgactgagagtgcaaaagcacagtggggaaaatacagatcattgcttgcaagtgccaaggaatcagttaatcatagcactggttctggttcagaatctagttcagtacagttggaagcaccaggagctgaagctgaggatattactggtgtaaagaagatgaagatgatcacacgatcaatcatggaggatgatcaagactgcgtgatggatactgttggtgctgtttgtgttgatgcttatggaaatatagcatcaggagcatccagtggtggcattgcactaaaggtagatggacgggttggtttggctgctatgtatgggtctgggtgctgggcctcatccaaagggccctttggcacaccgtttatagttgggtgttgtgcaactggagccggtgaacacttgattagaggatttgctgcacgtgaatgttgtatctcatcatcattgatacaatctggccctgcttctgcttgtaccaaagttctgcgccaagcggttcaaagcagcagcgagatgtctcatgatacaggcgctgggttgttgctaattcaggctgatgttctaaacagaagggaggtatctgcattgggagccgctgaacttgttgctgcctattcctccccttcatttggtgttggttatctcggaagctatatgaacagtcctaaggttgcaatgcttagatcttcaaaagctgcacccaatacgataaaccattttgctactcgtgtcaactttgacgcacaatctgaccaatga</cdnaseq>

Protein Sequence

<aaseq>MAGGDGGGGGGDESEFVGVGGGGGGGGEGEGNQSPPNRRFFVAV HVGAGFHAPANEKAYRRAMKRACLAAAAVLREGNGTSLDAVAAAIQVLEDDPITNAGR GSNLTESGHVECDASIMDGSTTTFGAVGAVQGVKNPIQIALHLAREQMVGPSLLGRIP PIFLVGEGACQWAKSKGLNLPEATSEGNSWLVTESAKAQWGKYRSLLASAKESVNHST GSGSESSSVQLEAPGAEAEDITGVKKMKMITRSIMEDDQDCVMDTVGAVCVDAYGNIA SGASSGGIALKVDGRVGLAAMYGSGCWASSKGPFGTPFIVGCCATGAGEHLIRGFAAR ECCISSSLIQSGPASACTKVLRQAVQSSSEMSHDTGAGLLLIQADVLNRREVSALGAA ELVAAYSSPSFGVGYLGSYMNSPKVAMLRSSKAAPNTINHFATRVNFDAQSDQ</aaseq>

Gene Sequence

<dnaseqindica>55..282#549..599#899..1019#1106..1190#1591..1672#1762..1891#2374..2537#2668..2831#3175..3295#3369..3470#3575..3664#aaacgcataattccaaaactttctcgtcctaatcgcgacgagctcgaaacgaacatggccggcggcgatggcggcggcggcgggggagacgagagcgagtttgtgggggtaggcggcggcggaggaggaggaggagaaggagaagggaaccagagcccccccaaccgtaggttcttcgtggccgtgcacgtcggcgccggcttccacgcgccggcgaacgagaaggcgtaccgccgagccatgaagcgcgcttgcctcgccgccgccgcagtgctccgcgaggttttgtactttaccctatcccctacttaccccccactcgcctccttctcctcctgctctcgtgcttggttggttttgtatggcatggagctcggattgacgcgcgatccccaccaagtgttccatctgagcaatggattttgactggcgagcggatttatgttctagatggggtattgattgaagtagtgtgaaaatgtaatgctcgagcggcgtccatgtagctttgcagtggtgaattcctaaatctcttaatacttttgcagggaaatggcacaagccttgatgcggttgcagctgccattcaagtattggaggtttggatcatctctttctacgtattgttacaatgtctacacgtactatgcagtttagttcaaattttacaatgggtgacaaataggatggtgtatgatatatggccacattttgatatgtcaaaaggggggaaaaaggaagagtggttctatagatcatataagcagggtttgcagacctcctagatataagcgaatcgagggtgatacagtgtacttgtatgtagataaagggctaatggtgtttgttccaagcaaaagttgtcttagtttatccattctcatctatggctgattaggatgatcccatcacaaatgctggacgcggttcaaatttgactgagagtggtcatgtggaatgcgatgcaagtatcatggatggttctactactacctttggagctgttggagctgtgcaaggtacttgtagtaatttgcgataaatcaatcctcctgtgtaaaagttactatttgtgttaccacacgtcttatttcttgtagatcaggtgtaaagaatcccatccaaattgctttgcacttggcaagggaacagatggtaggaccttcactgcttggtcggataccccctatgtaatcacagaactcaaggctcttcaccttttgtttcatcatgacctttttcttttccagtaatttattgtccttgtacgtacaatttttcaccagttttgtgcaagtatttggggagtttgggctatttcatgttttcttttccaaaaaaacttttatctcatctttaatcatgtaatgaaaacaatggctcttacaactgaactatcagatagaaagccccctttgtcacttcgtttcatgttatactgcaaaattatgaatggaacaaggcataatggctatcttttcataatccatgtatgatagataatatatcatgcagtcatccactatgtctaaacctttcatatgtcttagctaaagctctttataactgaattattcttttggcctttagctttttggttggtgaaggagcatgccagtgggcaaaatcgaaggggttgaacctacctgaagccacatcagagggaaatagtgtgggtcccctcttctttatgtgaattgtgccatccaagtctgcatttgtacttgttttgaaatcccgtcttggtatattctcaaatagtggttggtgactgagagtgcaaaagcacagtggggaaaatacagatcattgcttgcaagtgccaaggaatcagttaatcatagcactggttctggttcagaatctagttcagtacagttggaagcaccaggtcttttttctcccttactgttgctcttatttcatctgtgtgttagtatctctaatcacttctatattgattaagtggttatttatcatatccacaacgcttctttggttgaagtatcttctaaaacttaattgcagtttaatttattctcgtatatgtgttaaattcatgcaaatgcacaccactccttttcacaaggtcttccaatagttgtctatgctacatatgctattgcgtgttcttctgtatgccggcattctcttgtgttcatctgcatgatttttggcctccataaacggtcatctagatgctaatgtctgtacgagattcctttcaaatatatataattcaacactcaaatatgcagcactaggtcccaggcttgtggtactgctcattatttgcttgtgctttctgtgtgcatcagtatatgtaataacgtacttggccagtccacatcacatgttgccatttcattttaggagctgaagctgaggatattactggtgtaaagaagatgaagatgatcacacgatcaatcatggaggatgatcaagactgcgtgatggatactgttggtgctgtttgtgttgatgcttatggaaatatagcatcaggagcatccagtggtggcattgcactaaaggtccagtggtcatttttttcattgtatgatacttaaatttgtttgaggaggactcttttatttatatttcttgtatgatgcctttgcatagagattccccaggccttcaataagcattggtttcttgcaggtagatggacgggttggtttggctgctatgtatgggtctgggtgctgggcctcatccaaagggccctttggcacaccgtttatagttgggtgttgtgcaactggagccggtgaacacttgattagaggatttgctgcacgtgaatgttgtatctcatcatcattgtatgctcatctctacaaatttgctcttattgatatacagttctgcactatacaattctcaccatgtcattcagcctcaatgaatttgcaaacatgtaggactgcttgcatcatatttacactggcttcagctttgctatcttaatctacagtttgagcactgttgtttgccgtcacttgatgtcttgatctagccagttctgtcattcctgttggccataacatgatctagggcagtccatgcttatggactcctaacctttctacataatctattaccataatttcgttacattcaacatcatattctcttttggttggaactcaatttgtattttctcaggatacaatctggccctgcttctgcttgtaccaaagttctgcgccaagcggttcaaagcagcagcgagatgtctcatgatacaggcgctgggttgttgctaattcaggctgatgttctaaacgtggtactttgctgatacgtctccctggggtttgcatggataatctttgatttaacaatataacattctgcagagaagggaggtatctgcattgggagccgctgaacttgttgctgcctattcctccccttcatttggtgttggttatctcggaagctatatgaacagtcctaaggtagtattaggggcttcccattctatgtgaaaagttgagtttactaaactgtctggagttttgggccaatcatttgatatagcatattttgatctattttgcaggttgcaatgcttagatcttcaaaagctgcacccaatacgataaaccattttgctactcgtgtcaactttgacgcacaatctgaccaatgatgtgctgttgttttaatggcgtgtgccactgcagtacctcttgtgaaaagagcatgttggtggtgcatgtagtctggtcttgtaccgaagatattgtttttggcctaacccaaaatttctgtcgttcctaatacttttttttttaccgatgaaatgctattttagtgtgatttgcc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0682500, RefSeq:Os04g0682500