Os04g0685600

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Revision as of 11:36, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0685600| Description = Exo70 exocyst complex subunit family protein| Version = NM_001060855.1 GI:115461439 GeneID:4337464| Length = 6088 bp...")
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Gene Name

Os04g0685600

Description

Exo70 exocyst complex subunit family protein

Version

NM_001060855.1 GI:115461439 GeneID:4337464

Length

6088 bp

Definition

Oryza sativa Japonica Group Os04g0685600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:35421904..35427991

Sequence Coding Region

35422249..35422357,35423153..35423299,35423399..35423508,35423631..35423730,35423832..35424032
,35424398..35424603,35425228..35425440,35425509..35425647,35426094..35426330
,35426412..35426617,35427388..35427483,35427624..35427764

Expression

GEO Profiles:Os04g0685600

Genome Context

<gbrowseImage1> name=NC_008397:35421904..35427991 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:35421904..35427991 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagacccttgcgcagcgcgcggcgttgctgcgggagtcgctgcagaagagccagtccgtgaccgacgccgtcgtctccatcctcggctccttcgacagccgcctctccgcgctcgacgccgccatgcgccccatccaggtgaggacgcacgccgtgcggacggcccacgagaacatcgaccggacgctgcgctccgccgatgtcatcctcacgcagttcgatcgaactcgagaggcagagcgtgaaatacagaaggggccacatgaaaatcttcaaggttttctagatgcagttgatcggttgagaagtattgagcgtttctttagctcaaataggagctaccgaagcagtgatggtgtgctcaaccatgtgaatgccctcctttctaaggcccttgtgaagatggaagatgaattccagaagcaattgactcagcgcagcaaacctatcgagcctgatcgtctttttgattgccttccaagtacgcttcgaccatcatctgaatctcatcctgaaggtggaaaaaaccaatcacattctgaaaatcagcaaaactcggaagcagctgtatacagcccccctgctcttattgagccaaggttcattccttttctggctaaattagcacaacagttggtacaagcgggatgccaacaacaatgctcagaaatatacagcgaagcccgtgcctctgctttagagtcaagtttgaagagcttgggtgttgaaaaactgagcaaagatgaagtgcagaaaatgccatgggaaattttggagtctaaaatagggaattggattcacttcatgcgaattgctgttaaacttctttttgccgcggaacgtcagctttgtgaccaggtttttgagtgcagtcaatctttgagggataagtgctttgctcaaataactaggaatagtttggctacactactcagctttggagaggcaattgctatgagtaaaagatcaccagagaagctgtttgtgctgctagacatgtatgaaataatgtgtgaacttcaagcagatattgacaccatctttgttggagaatcatgctctcaaatgcgtgagtctgcattgagtttgacaaaatgcttagcacaaactgcacagaagactttcagtgactttgaagaagctgttgaaaaggacgcaacaaagaatattcatattgatgggacagtgcatcctttgacgagctacgtgattaactatgtcaaatttttatttgactaccagtcaactctaaaacagctcttccaggagttcaaaggggaagatggaacaggttctgagttggccactgtaaccatgagtatcatgcaggctttacagaataatctggatgcaaaagcaaaacaatacaaggatccagctttgatgcacatatttttgatgaataacattcattatatcgtgaaatctgtccgcagatcagaagccaaagatttattgggggatgactggattcaaaggcatcgaagaattgtacaacaaaatgcaaatcattatagaaggattgcttggtcaaaggtcttgcaatgcctctctggtcaaggtttgacttcatcaggaggtagtggtcaagtaggaagtgagggaggcaatagcagtggagcttcaagagctgcggtcaaagagagattcaggtctttcaatgtgctatttgaggagatttatcaaaagcagtgtggctggtctgttccagatacggagttgcgtgagtcactaagacttgcagttgctgaaatcctgttgcctgcatacagatctttcctaaagcgctttgggcctctcatcgagaacagcaaggcacccggaaaatatgtcaagcacacaccagagcaagttgagctactgcttgccaatttgtttgaaggaaaacaagagcgtacttga</cdnaseq>

Protein Sequence

<aaseq>METLAQRAALLRESLQKSQSVTDAVVSILGSFDSRLSALDAAMR PIQVRTHAVRTAHENIDRTLRSADVILTQFDRTREAEREIQKGPHENLQGFLDAVDRL RSIERFFSSNRSYRSSDGVLNHVNALLSKALVKMEDEFQKQLTQRSKPIEPDRLFDCL PSTLRPSSESHPEGGKNQSHSENQQNSEAAVYSPPALIEPRFIPFLAKLAQQLVQAGC QQQCSEIYSEARASALESSLKSLGVEKLSKDEVQKMPWEILESKIGNWIHFMRIAVKL LFAAERQLCDQVFECSQSLRDKCFAQITRNSLATLLSFGEAIAMSKRSPEKLFVLLDM YEIMCELQADIDTIFVGESCSQMRESALSLTKCLAQTAQKTFSDFEEAVEKDATKNIH IDGTVHPLTSYVINYVKFLFDYQSTLKQLFQEFKGEDGTGSELATVTMSIMQALQNNL DAKAKQYKDPALMHIFLMNNIHYIVKSVRRSEAKDLLGDDWIQRHRRIVQQNANHYRR IAWSKVLQCLSGQGLTSSGGSGQVGSEGGNSSGASRAAVKERFRSFNVLFEEIYQKQC GWSVPDTELRESLRLAVAEILLPAYRSFLKRFGPLIENSKAPGKYVKHTPEQVELLLA NLFEGKQERT</aaseq>

Gene Sequence

<dnaseqindica>5635..5743#4693..4839#4484..4593#4262..4361#3960..4160#3389..3594#2552..2764#2345..2483#1662..1898#1375..1580#509..604#228..368#actttccttcccagctgcgctaagcaatccccacccaccaccgctgcagctgcagttgcttcctctcctcccctctcttctcgccgtcggtggggtcctcctccaccctgtctctctcctcccccccagatccacccctgccccttcccgaaccttcgggaaccatctgggaggagtaagcaaccgcccaagctgtagcgtcagcggcggccggcgggggaggagcgatggagacccttgcgcagcgcgcggcgttgctgcgggagtcgctgcagaagagccagtccgtgaccgacgccgtcgtctccatcctcggctccttcgacagccgcctctccgcgctcgacgccgccatgcgccccatccaggtacacctgctctctgctctgctcgctcctcgccccccccccctcctccctcctagggttcttcgccgtttgattccttctaggctgctgttctgatgccgctgcctctcctctgctgctgtgtgcatatgtgtgtgcaggtgaggacgcacgccgtgcggacggcccacgagaacatcgaccggacgctgcgctccgccgatgtcatcctcacgcagttcgatcgaactcgagaggtgctccatcgcttcaaccccagatttccctacttcttactagtactacatatgctattaacaatatgtgtgccccgcccgcttgtggttggttggaacttggaattgtaactgcttgttccgtggctgatgaatgcggggaacgggtagttggtgtgactgtgatcagtccattttctgatctgcatctcctggcactgggcgtatgcttagttgcaagcttgcacggtggattagcccttcattttttaagtttctaaaatgcatctttgctcccgaatatgaaccagcagtgctcaggagtgctgtggagcatgcccaatccttctcattttctcgaaggagcttcactcccctttgtcctttctctggatggtctttgatgtttcgcctgcatgttggtgggggcaattatagcttgaattatagtttgtatacatcactgtgaggcagcgtattgttggtttggtaccacatggtccacatgtatttgttatagatacattaggaaggagaattctccattgcatgtggcggtatgcatataaattgttttcttcaacatgaattacagtaagtatttgtatttcaatatgtgccttgatggctgcccatattgggtttggcaactaaatggttggacatggattttccttttgaccgatttttgaagaccttgaatccaaaaaatgtacctagctatttttcagtgttggattactttggagaaaggtccgatttcagttattgacttattgtcatctgtgcaggcagagcgtgaaatacagaaggggccacatgaaaatcttcaaggttttctagatgcagttgatcggttgagaagtattgagcgtttctttagctcaaataggagctaccgaagcagtgatggtgtgctcaaccatgtgaatgccctcctttctaaggcccttgtgaagatggaagatgaattccagaagcaattgactcagcgcaggttgtgtctcattattagtttaaatgtttttaaccccaacatcatctaacttgcattttgcaccctcctgactgattccagcaaacctatcgagcctgatcgtctttttgattgccttccaagtacgcttcgaccatcatctgaatctcatcctgaaggtggaaaaaaccaatcacattctgaaaatcagcaaaactcggaagcagctgtatacagcccccctgctcttattgagccaaggttcattccttttctggctaaattagcacaacagttggtacaagcgggatgccaacaacaatgctcagaaatatacaggtaaaaggaagataaatattttcaggctatatatctattcatcacttcatggatactagacactaaatttgttgtaatatctggaaattttttgttctgtttgtccttttgatgctcacatgaataatgaaacgggttgaaaatacatatgtttgtctagattgattgattgaagatagaagcaaggctaggcgagctattttcatacttgtcaatttgagtatatttataaacttttttggcctttgtgaaaaccatgaaaaatgatttttttagtttggactgccagttccagctgaaaggaaaaacaaaatgttctccctgtgaataagtttaaagcacttgtctcctgcattcctttatatatttttcttgtttatatggcctatgtgctaactacctcctatgcggcaaaatactcaagcactttctcctcttgtgcacagcgaagcccgtgcctctgctttagagtcaagtttgaagagcttgggtgttgaaaaactgagcaaagatgaagtgcagaaaatgccatgggaaattttggagtctaaaatagggaattggattcacttcatgcgaattgctgtaaggatttttctcttatctactgtatggtgcaacatgcctctggtgacaccttttgctttaaacaggttaaacttctttttgccgcggaacgtcagctttgtgaccaggtttttgagtgcagtcaatctttgagggataagtgctttgctcaaataactaggaatagtttggctacactactcagctttggagaggcaattgctatgagtaaaagatcaccagagaagctgtttgtgctgctagacatgtatgaaataatgtgtgaacttcaagcagatgtaagtttctgattcataccatagctatctattaattgtttcattggccagccacaacccttttgtgcagaactgcgaaatgataagtgtgtgcatgctgagttaagatctgtttttaagtttctaaaaattttgagctccttatgccatcggaccaatttatggttgacgtaatcctgcagtactgatctcaacagcttgatatttttgggttgataaaattgcaaaagaaacatatgattaaatgatattgtgaatgctttgtgaaaaaaggggcaaaatgccaaacttctcactgcagatttcaaagtatgagaagtgcatggggcattatcatacttatatgacacagtgtggtgccatatttccaaaatttctctgttggtccatctatattgaagttcgccgttttaccagaaatcaattttcaccaaggtctttggaacttggactttcttgtttgcatattctttaatgaaaaacgacttcactagacaaatgttatagtaactaactaactatggagaatttagactgtcaactgaatgtaaatttattttagatatggtgctattttcttgacacggaaataagtaatatctacattttttatggattgtgtagattgacaccatctttgttggagaatcatgctctcaaatgcgtgagtctgcattgagtttgacaaaatgcttagcacaaactgcacagaagactttcagtgactttgaagaagctgttgaaaaggacgcaacaaagaatattcatattgatgggacagtgcatcctttgacgagctacgtgattaactatgtcaaatttttatttgagtaagtatatgatcatgtgcacttaatctttcctgtaatttgatagttgcattgctatactttcttgcatttcttcttcaatcctatccaccagtatgctgatatttgtgttttgcaatcgttgctgctgtatctcttctattggatagccttctaattcaccaagaccagattatttttccccagctgtatacgacaacaaatagatcactccaatgtagctgaacttcttttgtaccgttcttgcaaacattatctatatccaattttgtacctattaaatgctctttcagaatgtcttgttttgtcaagctgcaactggctatagctttgcaaaaaaaatgacaacatttaatctttcgcagctaccagtcaactctaaaacagctcttccaggagttcaaaggggaagatggaacaggttctgagttggccactgtaaccatgagtatcatgcaggctttacagaataatctggatgcaaaagcaaaacaatacaaggatccagctttgatgcacatatttttgatgaataacattcattatatcgtgaaatctgtccgcaggtatgttcttatgaagtaaggtataaacaaattcgcaatagccaataggttagtaactggatgagtgggtatagtttaatgctctcttttctttcttccagatcagaagccaaagatttattgggggatgactggattcaaaggcatcgaagaattgtacaacaaaatgcaaatcattatagaaggattgcttggtcaaaggtccatttgctagacatatttgaacaaaactcactgtttgtttctcttgcattttgttaccattgttgatgtttaataggaagagtgagcctaaagatctatgcattattccgattttacaggtcttgcaatgcctctctggtcaaggtttgacttcatcaggaggtagtggtcaagtaggaagtgagggaggcaatagcagtggagcttcaagagctgcggtcaaagagaggttggtcatgtacactaattattccagcttgcttttcgatgaatgatgttttaccatacaatttctgaaacagtgttttgcccactattttgtaaccagattcaggtctttcaatgtgctatttgaggagatttatcaaaagcagtgtggctggtctgttccagatacggagttgcgtgagtcactaagacttgcagttgctgaaatcctgttgcctgcatacagatctttcctaaagcgctttgggtatgtttctttgaaacttcattacatgtaaataatatattaatgcatggacaaggaccataactaatcctttattttctattcaaactctcctgctcatgtttttgtttctggcagtttgtcaaatgtgagttggtgcattttcttgtttgtgccagttatattatttaattaggtttaaaaaaaccatgaagattatatttacctaccaatttggtgctttatgaattcaaaattatttactagcattacaaatttacaatataaattgcaaaggcgttatccctagaaggctagaacctgatacacttcacggctgtttaggagacactccttattctccttttgatttctatctagacctgaatcctgactgtttaggctggcacttaattatgagtttgttagtagaaataacagcagcccctgactaagatcttagtcagtagtaggaattagagtgttccgggtgctttcaccaggcccagctttggtgcataccacatgccactgatatcagacctggacctgaccgactgtccctcggcaaaataattgttgcttgcatctcctctgctttgccgtttaagaaagagactttaacaaatttgcctgtcctaaaaccggcgtagccctggtccacagaattttgatgattgagcattgccatctgttcatttgtttaataccatgaattttccctcttttcttttatttctatgtttctatggatatgtatgttcactagactcaagagttcttgtccctggagcttatgagacttgtaatctataggcctctcatcgagaacagcaaggcacccggaaaatatgtcaagcacacaccagagcaagttgagctactgcttgccaatttgtttgaaggaaaacaagagcgtacttgattggggtatgtggctgcttaatatacaccagcgacgatgtgatgtcattctctgtaaattgggaccctggtagcattgcttttgtttgtgtagcgctgctgctcagaaccgttgctatgtgcacctttccttgctggggtgcatgatttgtatagatactgtcctagttgccatttattgtttttgttgatttggtaggtgctaggttcgttctgatatgttggaaactcgtgttagtgcattcattattcagtatcagcagtgtgcaataattgtccaatgttaatgcaacctctagtgcctccattttgcagttgcgggagtatagtcgcaactgtttcccac</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0685600, RefSeq:Os04g0685600