Os04g0689300

From RiceWiki
Revision as of 11:36, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0689300| Description = Phosphatidylinositol-specific phospholipase C, X region domain containing protein| Version = NM_001060879.1 GI:115461...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os04g0689300

Description

Phosphatidylinositol-specific phospholipase C, X region domain containing protein

Version

NM_001060879.1 GI:115461487 GeneID:4337489

Length

2955 bp

Definition

Oryza sativa Japonica Group Os04g0689300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:35667155..35670109

Sequence Coding Region

35667230..35667568,35667643..35667729,35667795..35668018,35668107..35668407,35668494..35668592
,35669627..35669764,35669840..35670058

Expression

GEO Profiles:Os04g0689300

Genome Context

<gbrowseImage1> name=NC_008397:35667155..35670109 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:35667155..35670109 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgccgcgtcgacgttccctctggctctgctgctcgccattgttgccgcatgctgcgtcgccgggggcgagggcggcgcgctggtgggcgacacgtgcacggcgtcgtcggcgtcgagctgcggggcggggatgcggtgcgccacctgctcaccgctgcccgggatgggaccacccgtgtgctcgcggacaacgccccttgaccccaaggcgcacgggacggacctcgcgttcaaccggtacacatggctcacgacgcacaactccttcgccatcgttggctcgccgtcgcgcaccggcacgcccatcatcgcgccgcccaaccaggaggacaccgtcaccgcgcagctcaagaatggcgtgaggggcctgatgctcgacgcgtatgacttccagaacgaagtgtggctctgccactcgttcggcgggaaatgctacaacttcgctgcctatcaacgcgcgatggacgtgctaaaggagattggggcgttcctggatgcgaacccatcggaggtgataacggtgttcgtggaggactacgctggtccggggagcctgggcaaagtggtgggcgggtcagggctgagcaagtacctgttcccgcctgccaagatgcccaagggcggaggcgactggcctctgctcaaggacatgatcgcccagaaccaccgcctgctcatgttcacgtccaagaggggcaaggacggcagcgacgggttggcgtacgagtgggactacgtcctggaaacccagtatgggaacgatgggctggtgggcgggtcgtgcccgaagcgagcggagtcgatggcgatggactccaccaagcagtcgctgatcctgatgaacttcttcagcaccaacccgagccagagctgggcctgcggcaacaactccgcgccgctcgtcgccaagctcaaggcctgctacgacgcctccgccaagcgctggcccaacttcatcgccgtcgattactacatgaggagtaagggcggtggagctccgttggcgaccgacgtggccaacggccgccagcaatgcggctgcgacagcatagcatactgcaagcctgggtcagcgttcgggagctgcagtttgtcatcgcctcctgcagcgccaccaaagatggctgctgcttcaccgccggcagcggctccagcaccagcaccagagatggctcctagttcaccgccggcagaaccaccagagacggcgacggaggctgctggttcagcggtgcgaccggcgtccatcaagttagagaaggacgacacgacgggcacatcgccagcggacaccgccaaatcctcctcctctaatcgctctcctcatccgtccagctgcagcttcctctttggattattattgccatctcttctcctcctccacctttatatttcagattga</cdnaseq>

Protein Sequence

<aaseq>MAAASTFPLALLLAIVAACCVAGGEGGALVGDTCTASSASSCGA GMRCATCSPLPGMGPPVCSRTTPLDPKAHGTDLAFNRYTWLTTHNSFAIVGSPSRTGT PIIAPPNQEDTVTAQLKNGVRGLMLDAYDFQNEVWLCHSFGGKCYNFAAYQRAMDVLK EIGAFLDANPSEVITVFVEDYAGPGSLGKVVGGSGLSKYLFPPAKMPKGGGDWPLLKD MIAQNHRLLMFTSKRGKDGSDGLAYEWDYVLETQYGNDGLVGGSCPKRAESMAMDSTK QSLILMNFFSTNPSQSWACGNNSAPLVAKLKACYDASAKRWPNFIAVDYYMRSKGGGA PLATDVANGRQQCGCDSIAYCKPGSAFGSCSLSSPPAAPPKMAAASPPAAAPAPAPEM APSSPPAEPPETATEAAGSAVRPASIKLEKDDTTGTSPADTAKSSSSNRSPHPSSCSF LFGLLLPSLLLLHLYISD</aaseq>

Gene Sequence

<dnaseqindica>2542..2880#2381..2467#2092..2315#1703..2003#1518..1616#346..483#52..270#gcaccaacgcgcgcaacggatgaaccatccgcctgcatcgatcttcctgcgatggccgccgcgtcgacgttccctctggctctgctgctcgccattgttgccgcatgctgcgtcgccgggggcgagggcggcgcgctggtgggcgacacgtgcacggcgtcgtcggcgtcgagctgcggggcggggatgcggtgcgccacctgctcaccgctgcccgggatgggaccacccgtgtgctcgcggacaacgccccttgaccccaaggcgcacgtacgtacacatcactcctctatcatttcgcaatgcagcaaccaaattcctcctcaatccattgatgcattgcaggggacggacctcgcgttcaaccggtacacatggctcacgacgcacaactccttcgccatcgttggctcgccgtcgcgcaccggcacgcccatcatcgcgccgcccaaccaggaggacaccgtcaccgcgcagctcaaggtctacatctctctctctctctcgccaataaataaataaatattcgaaattataccattctttcttcaccgattttacaaagcatatatatacacgcttataaacgattggtacaagtatattactccattgtcgtatagtgaggtatccatctatatccatctgtgcctgcatactggggtactgcacacggggctctgctactgtatcatagcctgctgtcttttgtgctcgtcgcacataatcgtcggtgcactttatcctctagagagaggtgtcatgtagtatatattctctctctacacaacaaacaaatcagaatcattcaccacaacgcaacgcaacgcatcacggtgtccgtttgctcggtacacatcaaaaggaggcaaaagtaaaaggctgatgctttggtctcaaggtacatttggccacgccacaccgcaccttttgtcaacgtgcatgcgcacccattccccaccaagcccaaattctaccgtttgctgcttacagtttaatttgcatactgtacacaaattgtcgattattgtactttctggtcactcagtgcaagtgatgccagcaagatagattaggcggcttgtctagtttcttagaaagaactacgactatatgataaacagcagttcattcaaccctgtattatctttggccgaaaactatagcatttctgtcaaaaacgagttttggtccgtccaggattaaccatttaagtggtatttatcgatttaactatttaatgtcgattgtaatgcaacacttaaaaattagaaaaattaaaacgatactcggtcaattggaaatttccgtcattattttcatccctattgaccagtgtgtggccttgcaatgcatatctgcacagtacagctgaaagatctgctcatcttcattacaaaactgctactattacgatacttgtagtcctagtagtactagctagcttacagaatcctgtttaatcattactattccgtttgataattaacgtcctagtacgtgctagtgcattgcagaatggcgtgaggggcctgatgctcgacgcgtatgacttccagaacgaagtgtggctctgccactcgttcggcgggaaatgctacaacttcgctgcctatgtaagcctgcattgctctgactgactgactgacgatagaaacctatacgattttgttgttgtttatatgtcgtggattgatcacagcaacgcgcgatggacgtgctaaaggagattggggcgttcctggatgcgaacccatcggaggtgataacggtgttcgtggaggactacgctggtccggggagcctgggcaaagtggtgggcgggtcagggctgagcaagtacctgttcccgcctgccaagatgcccaagggcggaggcgactggcctctgctcaaggacatgatcgcccagaaccaccgcctgctcatgttcacgtccaagaggggcaaggacggcagcgacgggttggcgtacgagtgggactacgtcctggaaacccagtgtacgtaaaagcacactgttgcttaattggtcgtcgtctgcatcgtgatgtctcctgatgttattgatcgatggtacatcacatgcagatgggaacgatgggctggtgggcgggtcgtgcccgaagcgagcggagtcgatggcgatggactccaccaagcagtcgctgatcctgatgaacttcttcagcaccaacccgagccagagctgggcctgcggcaacaactccgcgccgctcgtcgccaagctcaaggcctgctacgacgcctccgccaagcgctggcccaacttcatcgccgtcgattactacatggtccgctcccataatcattctgcctctgtttctgactaactgactgacgacccatccacgtgcagaggagtaagggcggtggagctccgttggcgaccgacgtggccaacggccgccagcaatgcggctgcgacagcatagcatactgcaaggttcttataatatccatcctttgtctccatcggttttctttctcaacccatatttatatatgttgtatacgcagcctgggtcagcgttcgggagctgcagtttgtcatcgcctcctgcagcgccaccaaagatggctgctgcttcaccgccggcagcggctccagcaccagcaccagagatggctcctagttcaccgccggcagaaccaccagagacggcgacggaggctgctggttcagcggtgcgaccggcgtccatcaagttagagaaggacgacacgacgggcacatcgccagcggacaccgccaaatcctcctcctctaatcgctctcctcatccgtccagctgcagcttcctctttggattattattgccatctcttctcctcctccacctttatatttcagattgatcgatgaggcttttatccatctcatcaattcgatggtgctaatatacttttattcatggatggactccatgatcc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0689300, RefSeq:Os04g0689300