Os04g0689400

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Revision as of 11:36, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0689400| Description = Protein kinase-like domain containing protein| Version = NM_001060880.1 GI:115461489 GeneID:4337490| Length = 5727 b...")
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Gene Name

Os04g0689400

Description

Protein kinase-like domain containing protein

Version

NM_001060880.1 GI:115461489 GeneID:4337490

Length

5727 bp

Definition

Oryza sativa Japonica Group Os04g0689400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:35670906..35676632

Sequence Coding Region

35670964..35671060,35671429..35671980,35672056..35672340,35672767..35673028,35673110..35673162
,35673252..35673319,35675063..35675152,35675234..35675318,35675554..35676083

Expression

GEO Profiles:Os04g0689400

Genome Context

<gbrowseImage1> name=NC_008397:35670906..35676632 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:35670906..35676632 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcccctcctccgcggcggcctcgtctccgtcgtcctgctcctgctcgcctcccccttcttcttctccgccaaccccgcagcaaccgccgtcggagattgccctttggattttagttgggccaacttcacattagcttcagccgcgtgctctgatcccacgcagcgggcggcatgctgccgatacatcaatgcattcgtcgccatttccatggctcgctacgccaatgccaccggcaggctgggtgtccctccggccttctctgagatatgtcttagctctgtatccgagacattcaagctacggggaatccccaccgatgctgatgtcttctgcgggctgggacccaagataagggtctcatatcagtgtgccggacgcgacaccgtccttgaaatgttgcaatccccaaatttcaatgacgttgttggaagctgcaggggtcctctatccttggatatcacttgcaagacctgcttgaattacggcattgtttacttgcatcgcctcattggctcggatgataacgttggtcttagcgtctgtcggaacgcggtttttgtcacgcttgcaactcaacagggcattttctcttacgacgacattgtcaagtgcttcttcggtgtacaagggatcacaatttttccagggccatcatctgttacatcgactccagcttcttctccaaatgtgacaacccctgttgatgctccagctccaaagaccaaaactgttctgcagaaacatcaccagccttaccggattacagtgatacctgggatagggatagcggttatattgcttgctgttctgctccaacttgtcttagtcatattgattcgtagaaagaacagggaattgaaaaatgcagaccttcatgctcagaacccagaaaatgcattctgtcagagtcaatcctggagatgtccagaaggtcaatcaccaatgttccaaaggtacagttacaaagagacaatgaaagcaacgaacaatttcagcacagttattggaaagggaggttttggaacagtctacaaagctcaatttagtgatggatctatagctgccgtaaaaaggatggacaaggtatcaagacaagctgaggaagaattctgccgagaaatggagcttttagctaggttgcatcatcgccatcttgtaaccctcaagggcttctgtatcgaaaggaaagaaaggtttcttgtctatgagtacatggcaaacggaagcctaaaggatcacctacactcatctggaagaaaggcattaagctggcagtctagactacagattgcaatggatgtggccaatgctctggaatatctccatttcttttgtaaccctccactctgccatagagacatcaagtcgagcaacattcttttagatgagaattttgttgccaaggttgctgattttggccttgcacatgcatcaagaactggcgccatcagctttgaagctgtcaacacagatataagagggaccccagggtacatggatcctgaatatgtgataactcaagaattgacagagaagagtgatatatacagctatggtgtgctcctactggagcttgttactggtcggagagcaatccaagacagcaggaatttggttgagtgggcacagggacacttatcatccggaaagatcacacctgaatttgtggacccaacgatcaggggcttggttgacatggatcagctgcatttggtagttagcattgtccagtggtgtacccagagagaagggcgggagaggccatccattagacaagtactcaggatgctctcggagaggctggatccagggaatggcagctttggcgaaggcatggaagatgcagaagggggattttatcctcggaacagcaaatgtggcgtccaccggaacgagctgattccgcacagtggcgacatgaggtctctccattcctcctcgagcacaacaagatcctactgcagccgcagcatgttacttgaatgtggccaggctcactctccgccggaaaccctatga</cdnaseq>

Protein Sequence

<aaseq>MPLLRGGLVSVVLLLLASPFFFSANPAATAVGDCPLDFSWANFT LASAACSDPTQRAACCRYINAFVAISMARYANATGRLGVPPAFSEICLSSVSETFKLR GIPTDADVFCGLGPKIRVSYQCAGRDTVLEMLQSPNFNDVVGSCRGPLSLDITCKTCL NYGIVYLHRLIGSDDNVGLSVCRNAVFVTLATQQGIFSYDDIVKCFFGVQGITIFPGP SSVTSTPASSPNVTTPVDAPAPKTKTVLQKHHQPYRITVIPGIGIAVILLAVLLQLVL VILIRRKNRELKNADLHAQNPENAFCQSQSWRCPEGQSPMFQRYSYKETMKATNNFST VIGKGGFGTVYKAQFSDGSIAAVKRMDKVSRQAEEEFCREMELLARLHHRHLVTLKGF CIERKERFLVYEYMANGSLKDHLHSSGRKALSWQSRLQIAMDVANALEYLHFFCNPPL CHRDIKSSNILLDENFVAKVADFGLAHASRTGAISFEAVNTDIRGTPGYMDPEYVITQ ELTEKSDIYSYGVLLLELVTGRRAIQDSRNLVEWAQGHLSSGKITPEFVDPTIRGLVD MDQLHLVVSIVQWCTQREGRERPSIRQVLRMLSERLDPGNGSFGEGMEDAEGGFYPRN SKCGVHRNELIPHSGDMRSLHSSSSTTRSYCSRSMLLECGQAHSPPETL</aaseq>

Gene Sequence

<dnaseqindica>59..155#524..1075#1151..1435#1862..2123#2205..2257#2347..2414#4158..4247#4329..4413#4649..5178#cactctctctccttcaacactgagctgagctccacactccgcgccgccatccagccaaatgcccctcctccgcggcggcctcgtctccgtcgtcctgctcctgctcgcctcccccttcttcttctccgccaaccccgcagcaaccgccgtcggaggtcagttaccttctccatccatcgattgccttatttactctagcagagtagcagtatttgtgatccgctccccatgcgactgattactgtactaatcactacctgccttcctgctttcgatactgctcatgcccgatttgatcttcccaaccctatataccatccccatcttctgtagtacgaatataatgcccagtgtttcatgccgcttaattgctactcacttgataactgcacgttttcttcttctacctgagttcctactcacttgattcaatgcacatcatcagacgcttacccattttctgttgcttcccaattactagcactacttttctctctactaaatccaccgcgtttctctgcagattgccctttggattttagttgggccaacttcacattagcttcagccgcgtgctctgatcccacgcagcgggcggcatgctgccgatacatcaatgcattcgtcgccatttccatggctcgctacgccaatgccaccggcaggctgggtgtccctccggccttctctgagatatgtcttagctctgtatccgagacattcaagctacggggaatccccaccgatgctgatgtcttctgcgggctgggacccaagataagggtctcatatcagtgtgccggacgcgacaccgtccttgaaatgttgcaatccccaaatttcaatgacgttgttggaagctgcaggggtcctctatccttggatatcacttgcaagacctgcttgaattacggcattgtttacttgcatcgcctcattggctcggatgataacgttggtcttagcgtctgtcggaacgcggtttttgtcacgcttgcaactcaacagggcattttctcttacgacgacattgtcaagtgcttcttcggtgtacaagggatcacaatttttccaggtattactaacttactactgatgcattctgattaagtttaaagatgaccactctctaacttggggaatttaccagggccatcatctgttacatcgactccagcttcttctccaaatgtgacaacccctgttgatgctccagctccaaagaccaaaactgttctgcagaaacatcaccagccttaccggattacagtgatacctgggatagggatagcggttatattgcttgctgttctgctccaacttgtcttagtcatattgattcgtagaaagaacagggaattgaaaaatgcagaccttcatgctcagaacccagaaaatgcattctgtcagagtcaatcctggagatgtccagaaggtttgtgcacttgattctattcaactaatctatatctaacaccatatttcacattactaaaaatgctttaagctagtaaaaaggtggaatttggtcttagcttgtttatggtcagtaaatcatggtaatcagatagtgtgatgtctgcctgaaacttgcttaggttgttacgctacgttgttatgcccaatgttgatgcgcgcataagatgttctaatatcagtgtttatcaactgctttatgcattcctgcgtcaaacctgttatgtgaaaaaaaatctaaaagaaagtctgctatttatgagttataatgttgtgcatcaacaagtatagctttgggctttagcatggcagtaataaaaactaaaccgatcacctcatcattctgttgtctcttatcgaaaccaaagtgttaccttcttttcaggtcaatcaccaatgttccaaaggtacagttacaaagagacaatgaaagcaacgaacaatttcagcacagttattggaaagggaggttttggaacagtctacaaagctcaatttagtgatggatctatagctgccgtaaaaaggatggacaaggtatcaagacaagctgaggaagaattctgccgagaaatggagcttttagctaggttgcatcatcgccatcttgtaaccctcaagggcttctgtatcgaaaggaaagaaaggtacgctggtatctttttgtcctattgtactacagaagtacagattttacactgtggtcatattatatatgtacttgtcaggtttcttgtctatgagtacatggcaaacggaagcctaaaggatcacctacactgtatgattgctttgtatatcttgaatcttctgtacatataatttatattttttaattgctgttaagttgtccaatttgaattgctacagcatctggaagaaaggcattaagctggcagtctagactacagattgcaatggatgtggccaatgctctggtatgtttgctttagttaatgaatctgcttccttggccttatgaatgtccttttgtgtagtttagtcaaaacatgagaaatgcaccattgagcaagcatacatcaagttgggtctctacagttcaacactgctctagcacctgcagtttttaactgttgttttacttaacactagatctgtgctcaaattttgttgctttaccttttgggcctaggttaatgacattatttgattccagtgaagtgcacatattaaagctgctacaacatctagatgaaaagtgcacttcatgagatactaggtgagaaatcacaacggaatttctcatgagaaaaaaaagttattattgaatcagcgcgagaaacacacatctcttgcctcctcttctggtctcaacaagatagaagtctactgaagttttagtttctcaaatactggtactaaagtttgagaagacatcaaatccattttttagagattgcccctgtctgaaagtcctattttgcaatttgatctaataatgtactccctcttataaggatttctaggttgtttagtggagattaagattgagaagaaaagactttagcgcccctcaataaatatggataggagggggtaatatgggaaaaaattgaatgggatgtgattaatgggacaagtagtactgtgcatagtgctagaaatccttagatttttttaacaagattcaaatgctagaagttcttatattttggaatggagggagtacattatttcgtgtagaagaacgtgatagcattttgccccctcctgggctcaatttctaggtgagccactgctacagtagcatgtaggaggatcagccattcttgtttgcatgggaaatattgtgacgagcagccattcttgtttgcatgggaaatattgtgacgagtataaaactactgaccaataaatattgttctgacttttgtatgtggtcctgctgtatataacttgtcaatttgacatggttgaccttttttttttgtggaccatttgctactaaagaaatcttcagtggtctggaattatggtgctttctttgcatttcacaaattagcttttgcacttctgccctaagcccatcgtgtcgagagagggtatcattgactaattacacatagccaactttactcaagctgaggcatttgaagttctgaacttgttttggactgtagaacgttgcttcggactggtaactcccaatgtgttattccgtccgtttcatattataagtcgatatgacttttttcttagtcaaacttctttaagtttaaccaagtttatagaaatatatagcaacattttcaacataaaacaaaccatcaaaatatattaaattttagtttcaataaaactagtttggtgttatagatgttgctaaatttttctatgaatttggtcaaacttaaataagtttgactaagaaaaaagtcaaagtgacttataatatgaaacggacggagtactatgttttttccatctgctttcttctggcttgagctggcattgcttgtttacctgccattatgtaatgcactttgagaagaaccagggtgaaaattcctggattttgttgtccagaattacacttgagcaattgagctatgttcaataagttccattgatatttcacgtatttgtgcatcgcatataactcccttttctgtacatcttacctgcattatggtggataatcatgtttgttcgtcatgcaggaatatctccatttcttttgtaaccctccactctgccatagagacatcaagtcgagcaacattcttttagatgagaattttgttgccaaggtttggtcatgtgatatgatgatagcttctggctgtaatgatttgccgtcgctgaaaaaccctgctgaatcttgtatttaggttgctgattttggccttgcacatgcatcaagaactggcgccatcagctttgaagctgtcaacacagatataagagggaccccaggtaaattttataacatgattaaattaaaatagctatttagcagattgaattcgtatttattgcctaaaaaaatcatttttagtgatattttaccacggatctgcattgagtaataggagaacagttgacaactgttacganattgcattaatgtaaaatagatttgagaaatggcactctccatacacnaacattgaggacaatttgctcatctctcttactgaatcaactgcagggtacatggatcctgaatatgtgataactcaagaattgacagagaagagtgatatatacagctatggtgtgctcctactggagcttgttactggtcggagagcaatccaagacagcaggaatttggttgagtgggcacagggacacttatcatccggaaagatcacacctgaatttgtggacccaacgatcaggggcttggttgacatggatcagctgcatttggtagttagcattgtccagtggtgtacccagagagaagggcgggagaggccatccattagacaagtactcaggatgctctcggagaggctggatccagggaatggcagctttggcgaaggcatggaagatgcagaagggggattttatcctcggaacagcaaatgtggcgtccaccggaacgagctgattccgcacagtggcgacatgaggtctctccattcctcctcgagcacaacaagatcctactgcagccgcagcatgttacttgaatgtggccaggctcactctccgccggaaaccctatgactccacgtcattgcggttcacttgtagccatgaaatttttgctctatcatattcttgaggcctctctgttgcgtacgtgctttcacggtgaagcaagtcatagcatccgacttataccgagagcagcttctggtgaaaattaagttttggtgagagtgaattggcagatgctatgatgtgcaatttgctgctgtctgtgtagtgtggttggttggtgtggcaaagtcagaagccagaagcgaagactactgttattattggttgatactggaggcaaaaccacgcatgcacatactattatatggtgttgcagattaattttaccagatctgctgttctggtttctcaagtctgtacttggcaattctttatagaactgttactgcgacggtgtgttttcttgtttgtattttttttttcttttgctgtgagacatgtcactgtgagcttgttggcaaatggttgcaagcggcacgaggttttgggccagtgggcagagaaacaaatccagacaaaacctcgagatcccatccttgctggatgcatgct</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0689400, RefSeq:Os04g0689400