Os05g0110600

From RiceWiki
Revision as of 10:03, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0110600| Description = Rab5-interacting family protein| Version = NM_001060976.1 GI:115461682 GeneID:4337590| Length = 1726 bp| Definition...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os05g0110600

Description

Rab5-interacting family protein

Version

NM_001060976.1 GI:115461682 GeneID:4337590

Length

1726 bp

Definition

Oryza sativa Japonica Group Os05g0110600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:544544..546269

Sequence Coding Region

544830..544868,544956..545085,545870..545973,546073..546183

Expression

GEO Profiles:Os05g0110600

Genome Context

<gbrowseImage1> name=NC_008398:544544..546269 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:544544..546269 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaggaagacgaagccgtcgaagcagtcgcgcgcgcaggcgcagcagaacggcggcgccggacactccaagctcgccaggtacttcgacccggaggcctcctgggacaaggatcaactgctggacgccgtgcactggatccggcaggtgctcggcctcgcctgcggcctgctctggggagccgtccccctcgtcggcgccatctggatcgcactgtttgtgactatttctactgggctcgtttactggtactatgcatacctgttgaagattgatgaggaagactttggaggccatggagcactacttcaggagggaatgtttgcctctttcactcttttcctgctttcatggacactcatatacagtttggttcacttttga</cdnaseq>

Protein Sequence

<aaseq>MRKTKPSKQSRAQAQQNGGAGHSKLARYFDPEASWDKDQLLDAV HWIRQVLGLACGLLWGAVPLVGAIWIALFVTISTGLVYWYYAYLLKIDEEDFGGHGAL LQEGMFASFTLFLLSWTLIYSLVHF</aaseq>

Gene Sequence

<dnaseqindica>1402..1440#1185..1314#297..400#87..197#ccaaccaaaccagctccatccatagacttgttgactgctccctcgcgatcccatctccgccgccgccgccgccgccgccgagcgagatgaggaagacgaagccgtcgaagcagtcgcgcgcgcaggcgcagcagaacggcggcgccggacactccaagctcgccaggtacttcgacccggaggcctcctgggacaaggtatacttcctcctcctccttcttgccgccattaatggcggcctccggattctccttgcctgatggatgcttgcttggctgggctctcctttgcaaaaggatcaactgctggacgccgtgcactggatccggcaggtgctcggcctcgcctgcggcctgctctggggagccgtccccctcgtcggcgccatctggatcgcactgtgagttgctcacgcctccaatcccatctcgccctatgctggattcgtggatttgtagtcagatgtgtcttgttgagtctcttcctcacattgaggagttcaattgtagtgcagataggggatcagatttatcatatgttaataacttttctgctttttagttgggaattgggatctgcgctacaggaggtcattgtctacaaaatccaccttttgctttggtgtggattttggttgttttgacacctgtaactgcaagatcttagctcgatgatacgtgcacatctgctgccctagatgcatttaggttatcttcggtgaagattaactgtgcgttgaacctttaattgctgataattagaagaccctgaagctataagcaagcatgcgcaaacatccatcttgaatttagtataattagtgtgtgaaactgtgaatgctactaggttctttagattcatgtgctgtatcacttaagatgagcttttggcaatacaatttaatttggcctggagtacattgcaagcatgattatcgaacctgtcggtagctgagtaccctgaaaatttatgcagaattatcagtaattatttctgtttatatgacactagtaagcaataccttgcacagaattactgtaattattgtttcattattatactttcagtaattactgttttctttcttctgtatggcacagtgaactctgtaaagatcgttaattaataccagcatctgagcttttgatatgttcctcttaacatatgacatatattgtacacaggtttgtgactatttctactgggctcgtttactggtactatgcatacctgttgaagattgatgaggaagactttggaggccatggagcactacttcaggagggaatgtttgcctctttcactcttttcctggtaaaaagaaaaacataaccaatttctgtaactaccctgtttccgtttgttttggttcgaaactgaatttgcttctttttgctgcagctttcatggacactcatatacagtttggttcacttttgagaagctcctctgatgacatgttgcccatggatggaagtttgtgcaccatgtttggtcaggaaggaatcaccagaacagtgtagattaagggggccatttagagcaaactttgtattatgaaaaccgttaaaggcagtaatgttgtttcctttcagagtcccaatgtaattttgatagtatggttttaactcaatgaggtagaacattgcttgtctgaaaaacgtgcttaccgagttagaacatttgtactgtatcattcaattgcatccagccaataagcctttct</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0110600, RefSeq:Os05g0110600