Os05g0110700

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Revision as of 10:03, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0110700| Description = Kinetochore-Ndc80 subunit Spc25 family protein| Version = NM_001060977.1 GI:115461684 GeneID:4337591| Length = 3713 ...")
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Gene Name

Os05g0110700

Description

Kinetochore-Ndc80 subunit Spc25 family protein

Version

NM_001060977.1 GI:115461684 GeneID:4337591

Length

3713 bp

Definition

Oryza sativa Japonica Group Os05g0110700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:546832..550544

Sequence Coding Region

547138..547149,547829..548055,548555..548683,548779..548868,549113..549226
,549395..549541,549615..549680,550242..550440

Expression

GEO Profiles:Os05g0110700

Genome Context

<gbrowseImage1> name=NC_008398:546832..550544 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:546832..550544 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaagccggaggcaccgccgccggcacacgaggaggaggaggaggggcggagctgtgccggcagatggcggcgcagctggcggcgtaccagcgcgggatggccgtcgaaagggagcgccaagcttccacctccgccaactaccgcgccgcgcttctctcctcccgctccatcgcccgtcaaaccatctcccgccaagaggaactgagtggactcaaccttcagttgcggaatttggaagatggtcttgcagaagcattgtctgttaaggccggcaaggagtcaaagtaccaacttaccaaagagacgatttcaagcactgcggctataaatgagaagcttgagggcatggttacagatcagcggaacaagagagatcaccatgctgcagtcatatcgaatcacctcgaggctgttgaagctcttgaagcaaagtttattgaggatgaaacacggatgaagaaaatagaagaagctgtaatctggtacagcaagttccttggtttccaggttgttggaggagaaggtgtaaagttcatcttcaacaaaatagacttgcaaagccctgataaggagtactcggttaccttaaagcttgccaaagatcgatataacttacttcaatgtgatccaagtataaaagattctgaagagttgatgaaggatttgaacctcactaacgatctgttcaagtttgtaagaatcgtcagagaaaggttccaggctgaggctgctactgtgaatggaggtcttctcatgagttcagttgtttgtccagatgcttcctctataccagtttcacctccaatgttaatgccacttgactctagaactgaaaatgttcttgataagagtctttctcagagtaagaacaaggggcggaatctaccttctaaaagaggagctgctgccctatcagcagcatctcctggttctgcggtatctattgtgcggcgctccccacattttgtgggaatcaggtga</cdnaseq>

Protein Sequence

<aaseq>MEAGGTAAGTRGGGGGAELCRQMAAQLAAYQRGMAVERERQAST SANYRAALLSSRSIARQTISRQEELSGLNLQLRNLEDGLAEALSVKAGKESKYQLTKE TISSTAAINEKLEGMVTDQRNKRDHHAAVISNHLEAVEALEAKFIEDETRMKKIEEAV IWYSKFLGFQVVGGEGVKFIFNKIDLQSPDKEYSVTLKLAKDRYNLLQCDPSIKDSEE LMKDLNLTNDLFKFVRIVRERFQAEAATVNGGLLMSSVVCPDASSIPVSPPMLMPLDS RTENVLDKSLSQSKNKGRNLPSKRGAAALSAASPGSAVSIVRRSPHFVGIR</aaseq>

Gene Sequence

<dnaseqindica>3396..3407#2490..2716#1862..1990#1677..1766#1319..1432#1004..1150#865..930#105..303#gggttcgaactcctcacttcaacccgcactccggccaccgtcggctgccgccgatccctccgccgccgacgccggacgccgccagtgcccagggagttggtagcatggaagccggaggcaccgccgccggcacacgaggaggaggaggaggggcggagctgtgccggcagatggcggcgcagctggcggcgtaccagcgcgggatggccgtcgaaagggagcgccaagcttccacctccgccaactaccgcgccgcgcttctctcctcccgctccatcgcccgtcaaaccatctcccgccaaggcaacgccctcccctaatccctccccccaccccctcaatctctctcgtttcaataaacaccccccatttttttttgtgcgaaatgaactttggacgcgtgtctgatgtatcttcgattttattttatttggaaaatgtggttggtacttggtactgaatgtgaattgaatttgagtgaattgaagtaactctacccggtttcccctccgatgagtgctgaaatttttgtgttaaatattgctgaatttcagctagcaatacattccgatgagtttcctaataggactttgtattacaggattatcgttttctcttatagtttcctagtaggacttctaatcttttatctgttagggctcctacatttctcctttatatatcccttgtaagccatatgggaaggggttgtccgccttgttatcccctgcgtttttagcacctcaatagtgatcattgatcattgccagtcggtgtccatggtctttttcctgtaagggtgttcgacgataaaatttgtgtttctgttgtgcatttattttcataacattttggatggtgcagaggaactgagtggactcaaccttcagttgcggaatttggaagatggtcttgcagaagcattgtctggtaaattaaactgcacttcgctgccaaatggttcatggtatgcctgaaatcttggtgtaaactgtatttacagttaaggccggcaaggagtcaaagtaccaacttaccaaagagacgatttcaagcactgcggctataaatgagaagcttgagggcatggttacagatcagcggaacaagagagatcaccatgctgcagtcatatcgaatcacctcgagggtaacttacctatcattttagggctatgttttgggttttttttttttgttgctgtggcttatttaaggtttttcaaaacattatattgctagtcttagaaaatgtctttcttgaactgtgcacatatagtgttcatacgatagtgatatacttcatgtactgtggcagctgttgaagctcttgaagcaaagtttattgaggatgaaacacggatgaagaaaatagaagaagctgtaatctggtacagcaagttccttggtttccaggttgttggaggagaaggtgagtgatgaatcagctcaatgttcaagtaaattatgggataaattccttatgccttttaaatttcatcttatcctttatatgccacttatcagctcactgactcgtgggtttaaagcccacatgtcattgggacaacagtggcacataggggatgaagtgaactttactgaggaatataaggaatcgcccctaaattatgccaattccatctttcatggcatttgccctgttcttcctcaaggtgtaaagttcatcttcaacaaaatagacttgcaaagccctgataaggagtactcggttaccttaaagcttgccaaagatcgatataactgtgagttgaagttcctcatgaaacttggccaagtgtcttgaatgcttgattttttgagctgtacttgacattatctttttttttcctaacaacagtacttcaatgtgatccaagtataaaagattctgaagagttgatgaaggatttgaacctcactaacgatctgttcaagtttgtaagaatcgtcagagaaaggttccaggctgaggctgctactgtgaatggtactgaacattaactgtcagtatgaattgtcgttgcaatgaacatggtagggattaggggatagggcctttagtcctaactgaggtgtcctcaacccaagtggcacaatagcctttttaaatatgccatatccttagcagattgatctaattaccaaactacagatatgccatgattgccatcaagtactggaaccacataaatatgctatgtaattgatctactcctaagcattacccataagcttccctgttaacacttaacagccatctcacggaaaattacgactctcctccaagccgctgtgtactcagctccagctgcattgccgtgcaactggccataatgtgcactgtagacatgactagttttctctcccttcatgacttctcatcctcccttttctcatagtaccgatcctttgtttgctcccatatttatgcacacaggcttccttttttttggttgtaatctaactcgtgcaactgatttccgcaggaggtcttctcatgagttcagttgtttgtccagatgcttcctctataccagtttcacctccaatgttaatgccacttgactctagaactgaaaatgttcttgataagagtctttctcagagtaagaacaaggggcggaatctaccttctaaaagaggagctgctgccctatcagcagcatctcctggttctgcggtatctattgtgcggcgctccccacattttgtggtaaccatctcttctcctaaaatttgtttccagtttctgattatattttgaggagccaaaatagcagtgaggctcaagtgtcagtttagaatgttctactcacttcccacagatgttatagctgagtgggagaaccattttgattatgcatattcatggaggcaatatgcccttttgctttgatgcacatttgctcttttgcacaagttgagtttttagtagtaatagcctaatagggctttgctggttccttcctaggctcttgtgaactttgcattcaggcgattcaaaacttggtacgaatgatcattgaggtttacaccttttaggctagtcaaggatggtttttactactgggttagtaccctgtcaggaagaattgcaatctgcaatcttacatatgaattccttagatgaacaactgtcactgaattttgcaccatgcttattggaagttcttttcgggccattatcctatccataacatttcgagcattccaaatttatgtgcatgatgtatcatatttcaaggcagacaacaacatggatatgtgattttatttatttatttatttatttatttatttttttgcattctatgcatgaatgataagtgatactactaatcacagtgaaaggcggataatgaatcttgacaattttcacattgttcctgcagggaatcaggtgagttgtcagctgaggcaatttgttgtcacctgagcagactggctctttaactgatcaagcattgtagatccaagaaagtaactaaagtaatatcttcaaataattcatcaactgtcagggaactcattgccggttgtatgtatgattcaaattatcttgtcagatcttgtacttgatggcgttgtgtgttagtacttcccttatcaaatgaatcgcttgtttagcgagcagtgatctcatggtgtacttctatccaatgtactgaactgttatagtgttattatgggattttctctctctttttttt</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0110700, RefSeq:Os05g0110700