Os05g0111000
| Gene Name |
Os05g0111000 |
|---|---|
| Description |
Similar to Gag polyprotein [Contains: Core protein p15 (Matrix protein) |
| Version |
NM_001060980.1 GI:115461690 GeneID:4337594 |
| Length |
4473 bp |
| Definition |
Oryza sativa Japonica Group Os05g0111000, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 5:571398..575870 |
| Sequence Coding Region |
571506..571798,573103..575665 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008398:571398..575870 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008398:571398..575870 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggagccgcagctgacgccgggggcggtgcaggcgatagcggagcacccggacgggacggggacgatccagccggtgctgcaggtggtggacgtgcggcccgtcaccaccaagaacgcgccgcccacgcccaagcccgccgagcgcttccggatgatgctctccgacggcgtcaacacgcagcagtccatgctcgccaccgccctcaaccccctcgtcaaggacgccacgctccgccccggcaccgtcgtccagctcaccgacttcatgtgcaacaccatccagggtaaaaggattattattgttgtgaaacttgatgttctgcaaaatgactgcattgtaattgggaaccctaaacactatgaaccaaagagtctaactaaggagcaagaccctaacttacaggccagtgtggctcaaaccaataatggaacctattctggtggcgcaagcatgctgggcccctccgttgcgccaagggcagagcaggctgctagcaacagttcatatggtggaccttataatagtgctcaaggaatgttgggttcttctattggcaggacagttgaacctggtcctgcaaatgtttctgctgttggctcttacggtgcaatatcagcacagaacacaacgaatgccaacatgatgcagcctacatctcagctgaacataatgaatgccaacacgatgcagcctacatctcagctgaacacaatgaatgccaacacgatgcagcctacatctcagctgtcctcgttgaaccctaatcaaaaccaaaggtttgcagctcctgcttcgggtggagtctttggccctcctggcaatgcttatgggcagccttcacgtccttcatatcagcagccacctccagtgtatatgaatagagggcctgcctctaggaatgactctgcaactcgtatcatcccaattaccgcgttgaatccataccagcctaagtggacaatcaaggcaagggtgacagcaaagtctgatatcaggcattggagcaatgccaggagttcaggaacagttttctcgtttgatcttcttgatgcacaaggtggagaaattcgtgcacaatgctggaaagaatcggctgataagttttttggccaaattgaggttggtagggtgtatttgatatctagaggatcactgaagcccgcccagaagaagtataacactttgaaccatgattatgaaataactctggatatcgggttatcaactgtcgaggtttgctctgatgatgataacagcatccccaggctgcagtacaatttccggcagatcagcgaactagagaatatggctaacgagaccattgttgatttacttggtgttgttacatcagttagcccttctgcaacaataatgaggaagatcggcactgaaacccggaaaaggtctattcaactgaaggacttgtctggccggagcattgaagtaacattatggggaaacttctgtgatgctgagggtcagcagttgcagttgcagtgtgattctggttcgaaccctataattgcttttaaaggtgcccgtgtgggtgattttaatggcaaatcagtgagcacaattggttcaacccagttaattataaatccagactttcctgaggtggaaaggctgaggcagtggtacatgacagaaggaaaaactgctccttgcatttctttatctcgagaaatgcttaatatgggccggactgatgcccgcaaaacaattgcacagatcaaggatgaaaatttgggacgattagagaagccagactggatcactgttaaggctgcaatctcccatgtgactactgagagtttttgttatccagcttgcccaaagctcttgcccgtcgggaggcagtgtaataaaaaggcaataaataatggtgatgggatgtggcattgtgaccgatgtgatgagagttttcaaaatcctgaatataggtacatgcttaggttccagatccaagaccacactggtagtacctatgctagtgcgttcgatgaggcaggtgagcagatttttggtcgcaaggcaggagaacttttctcgataagaaatgtcgaccaagatgatgcacaatttgcagagatcatagaaggggtccggtggcatctatatctattcaaactgaaggtcaaggaagaaacctacaatgatgagcaaagcttgaaatgcaccgctgtcaaggttgaaaaactggacccatcaaaagagagcaacgtcctacttggagcgattgacaaccttttactggacccaaaggggcaaagtgatcttgcccctaatgctggtttcaccgatccggtaggcggtcacggtgcgcctacatctagcaatgcctatgccatgaatactggtggcgtgaatcagtttgggcagcaagcgagtataagcgccgggatgtctactccactagcagcaacacgaaacttgcagacatgcagcatttgtggagcaaatgggcacagcgcccagatctgccatgtgggtgcagatatggatatgcaggaaacatcagccggtggaagctccatgggtaactacaactccatcgctggcaacggcagctcggagtgttacaaatgtaaacagcccgggcactatgctagagactgtccagggcagtccactggtggcttggagtgtttcaaatgtaaacagcctgggcacttttctagagactgtccagtgcagtctactggtggctcggagtgtttcaaatgtaaacagcctgggcacttcgctagagattgtccagggcagtctactggcgcccagcaccagacatatgggaataatgttgcagcatcaaggggttacaataggcaatcctttgttggtggctactga</cdnaseq> |
| Protein Sequence |
<aaseq>MEPQLTPGAVQAIAEHPDGTGTIQPVLQVVDVRPVTTKNAPPTP KPAERFRMMLSDGVNTQQSMLATALNPLVKDATLRPGTVVQLTDFMCNTIQGKRIIIV VKLDVLQNDCIVIGNPKHYEPKSLTKEQDPNLQASVAQTNNGTYSGGASMLGPSVAPR AEQAASNSSYGGPYNSAQGMLGSSIGRTVEPGPANVSAVGSYGAISAQNTTNANMMQP TSQLNIMNANTMQPTSQLNTMNANTMQPTSQLSSLNPNQNQRFAAPASGGVFGPPGNA YGQPSRPSYQQPPPVYMNRGPASRNDSATRIIPITALNPYQPKWTIKARVTAKSDIRH WSNARSSGTVFSFDLLDAQGGEIRAQCWKESADKFFGQIEVGRVYLISRGSLKPAQKK YNTLNHDYEITLDIGLSTVEVCSDDDNSIPRLQYNFRQISELENMANETIVDLLGVVT SVSPSATIMRKIGTETRKRSIQLKDLSGRSIEVTLWGNFCDAEGQQLQLQCDSGSNPI IAFKGARVGDFNGKSVSTIGSTQLIINPDFPEVERLRQWYMTEGKTAPCISLSREMLN MGRTDARKTIAQIKDENLGRLEKPDWITVKAAISHVTTESFCYPACPKLLPVGRQCNK KAINNGDGMWHCDRCDESFQNPEYRYMLRFQIQDHTGSTYASAFDEAGEQIFGRKAGE LFSIRNVDQDDAQFAEIIEGVRWHLYLFKLKVKEETYNDEQSLKCTAVKVEKLDPSKE SNVLLGAIDNLLLDPKGQSDLAPNAGFTDPVGGHGAPTSSNAYAMNTGGVNQFGQQAS ISAGMSTPLAATRNLQTCSICGANGHSAQICHVGADMDMQETSAGGSSMGNYNSIAGN GSSECYKCKQPGHYARDCPGQSTGGLECFKCKQPGHFSRDCPVQSTGGSECFKCKQPG HFARDCPGQSTGAQHQTYGNNVAASRGYNRQSFVGGY</aaseq> |
| Gene Sequence |
<dnaseqindica>109..401#1706..4268#aaaaaccctcccccgaattcgaaatcgaatcgcctcccacatctctctctctcgcggaagcttctggaaggttcggaggcggcggcggcggaggcggcggggacgacgatggagccgcagctgacgccgggggcggtgcaggcgatagcggagcacccggacgggacggggacgatccagccggtgctgcaggtggtggacgtgcggcccgtcaccaccaagaacgcgccgcccacgcccaagcccgccgagcgcttccggatgatgctctccgacggcgtcaacacgcagcagtccatgctcgccaccgccctcaaccccctcgtcaaggacgccacgctccgccccggcaccgtcgtccagctcaccgacttcatgtgcaacaccatccagggtaaaaggtcagcaaaccaccacaacacgcgccccccttcctctcttcccctctgatgagactcttgcagtctttttggtttggatgtttccgcgagaaagattggatcttgatgtgttagttcatctggttactgttttgagaaaaaagatttggtcttgcggcgatgcgcgggttgggagaggagggctctgtgtttaggtttctttggattgcgatgtttgcaatccagattggatagttcaagaaatgacgggttataattggtgcatgccttcaggtgtttgttctagatggcctgtgtcagtttccacttaactgtaatgccttctcagataaggagaatagttgcttcttttcccctttggggtgttcgttatgtaaagatgccaatgcaacgaaatatttgtctgttactacattgttgggattctgtgatttacatctagatctaattcgcacagtagtctttatgtcaacatgggggacagtgagaaggtcacattgctttttcaagcattaatttttttcttctactcagtataccttgttcgttctggtctgtctggcatgcgattacggagttctcaacttttcattaagttacagttgaacaggctgtccttattttgaatcatcatggtaaaattgggggctattgtgttgattcattgtattgaactctcaaatgaatgttttgtttaagtatgtacggtggcttgcatgtgatctcatcttatctgtaggttctaaggaaggtttgcttttccatctctacattgatttcagatgcgcttttatctttgtcatgtttcatccaacgagattttatcactttggggttctattgttagcagttgtccaatgtcgacaaatattcaacctgcaaatatgtttcaacttgcaactaatttgctggctaggttggttagtaaaagtgtactgtattttgagtaatttctcagagtattgtctttcatttaggtttccattaaaccattgaacaagtcacaacggcatgttgcaatgggctgaactgtagaactatcattcataactaagtgtgcaaaccttgctttttctgtaggggtgtgtttatcttttcactgtttcatcaccctcaattgagaaatcttacctatttatggtttatgtgctcatttctgtgtatcagtttggttgatgtgatttagaactggcctaatgccttctaaaaggaacatcctatttggaacttcagattattttttcttcatttttatgaatcactatgaccactatagttgacaattcttcaattctttttttcaggattattattgttgtgaaacttgatgttctgcaaaatgactgcattgtaattgggaaccctaaacactatgaaccaaagagtctaactaaggagcaagaccctaacttacaggccagtgtggctcaaaccaataatggaacctattctggtggcgcaagcatgctgggcccctccgttgcgccaagggcagagcaggctgctagcaacagttcatatggtggaccttataatagtgctcaaggaatgttgggttcttctattggcaggacagttgaacctggtcctgcaaatgtttctgctgttggctcttacggtgcaatatcagcacagaacacaacgaatgccaacatgatgcagcctacatctcagctgaacataatgaatgccaacacgatgcagcctacatctcagctgaacacaatgaatgccaacacgatgcagcctacatctcagctgtcctcgttgaaccctaatcaaaaccaaaggtttgcagctcctgcttcgggtggagtctttggccctcctggcaatgcttatgggcagccttcacgtccttcatatcagcagccacctccagtgtatatgaatagagggcctgcctctaggaatgactctgcaactcgtatcatcccaattaccgcgttgaatccataccagcctaagtggacaatcaaggcaagggtgacagcaaagtctgatatcaggcattggagcaatgccaggagttcaggaacagttttctcgtttgatcttcttgatgcacaaggtggagaaattcgtgcacaatgctggaaagaatcggctgataagttttttggccaaattgaggttggtagggtgtatttgatatctagaggatcactgaagcccgcccagaagaagtataacactttgaaccatgattatgaaataactctggatatcgggttatcaactgtcgaggtttgctctgatgatgataacagcatccccaggctgcagtacaatttccggcagatcagcgaactagagaatatggctaacgagaccattgttgatttacttggtgttgttacatcagttagcccttctgcaacaataatgaggaagatcggcactgaaacccggaaaaggtctattcaactgaaggacttgtctggccggagcattgaagtaacattatggggaaacttctgtgatgctgagggtcagcagttgcagttgcagtgtgattctggttcgaaccctataattgcttttaaaggtgcccgtgtgggtgattttaatggcaaatcagtgagcacaattggttcaacccagttaattataaatccagactttcctgaggtggaaaggctgaggcagtggtacatgacagaaggaaaaactgctccttgcatttctttatctcgagaaatgcttaatatgggccggactgatgcccgcaaaacaattgcacagatcaaggatgaaaatttgggacgattagagaagccagactggatcactgttaaggctgcaatctcccatgtgactactgagagtttttgttatccagcttgcccaaagctcttgcccgtcgggaggcagtgtaataaaaaggcaataaataatggtgatgggatgtggcattgtgaccgatgtgatgagagttttcaaaatcctgaatataggtacatgcttaggttccagatccaagaccacactggtagtacctatgctagtgcgttcgatgaggcaggtgagcagatttttggtcgcaaggcaggagaacttttctcgataagaaatgtcgaccaagatgatgcacaatttgcagagatcatagaaggggtccggtggcatctatatctattcaaactgaaggtcaaggaagaaacctacaatgatgagcaaagcttgaaatgcaccgctgtcaaggttgaaaaactggacccatcaaaagagagcaacgtcctacttggagcgattgacaaccttttactggacccaaaggggcaaagtgatcttgcccctaatgctggtttcaccgatccggtaggcggtcacggtgcgcctacatctagcaatgcctatgccatgaatactggtggcgtgaatcagtttgggcagcaagcgagtataagcgccgggatgtctactccactagcagcaacacgaaacttgcagacatgcagcatttgtggagcaaatgggcacagcgcccagatctgccatgtgggtgcagatatggatatgcaggaaacatcagccggtggaagctccatgggtaactacaactccatcgctggcaacggcagctcggagtgttacaaatgtaaacagcccgggcactatgctagagactgtccagggcagtccactggtggcttggagtgtttcaaatgtaaacagcctgggcacttttctagagactgtccagtgcagtctactggtggctcggagtgtttcaaatgtaaacagcctgggcacttcgctagagattgtccagggcagtctactggcgcccagcaccagacatatgggaataatgttgcagcatcaaggggttacaataggcaatcctttgttggtggctactgaagtattttgcaagggaagaagcagcagcagcagcagcatcttgattttgttcatcttggatggcatcggtgtatcgtgtatagttgttaaacctgccttatgtttatgcctttattacctccaatgtccactgggcagggaaccttgtgatctggactttgtatcgctaccttaaaaagtatattgtccttgtctgcaatcttgt</dnaseqindica> |
| External Link(s) |
