Os05g0112101

From RiceWiki
Revision as of 10:03, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0112101| Description = Epsin, N-terminal domain containing protein| Version = NM_001187248.1 GI:297723626 GeneID:9270026| Length = 2024 bp|...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os05g0112101

Description

Epsin, N-terminal domain containing protein

Version

NM_001187248.1 GI:297723626 GeneID:9270026

Length

2024 bp

Definition

Oryza sativa Japonica Group Os05g0112101, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:626696..628719

Sequence Coding Region

626902..628647

Expression

GEO Profiles:Os05g0112101

Genome Context

<gbrowseImage1> name=NC_008398:626696..628719 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:626696..628719 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgatccgcaaggcgctgggcgccgtcaaggaccagacctccatcggcatcgccaaggtctccgccgccatcgcgccggagcttgacgtcgccatcgtccgcgcgacgtcgcacgaggacgcccccgcggaggaccgccatgtccgcgaggtggtcaccctcaccgcgcactcccgcccctacaccgccgcctgcgccgcctccctctcgcgccgcctctccaggacgcgcgactacgtcgtcgccgccaagtgcctcgcgctcgcccaccgcctcgtcgccgacggcgacccgcacttccgccacgagctcgtccgccccgcgggccgccgcggcgagccgatgctcgcgctcctcgccgagttccgcgacgaagcgcactccgcgtcgtgggaccactccgccttcgtccgcgcctacgcgctctacctcgaccaccgcgcccgcttcctcatatccctcctccccgcgccgcgcaccgtgcgcttcgccgacgagacgggatcgccgccgcgggggtcgacggcggcgacggtgcaagagatggacaccgaggcgctcctgggccgggcgctgcagctccgccagctgctcgaccgcgtcctcgcgtgccgcccatccggcggcgcgaggcaaagccgcgtcgtgctcgccacgctctacccggtggtcaaggagagcacgcagctctgctccgacgtcgccgtcgtgctcgccgtcctccttgaccgcttcttcgacatggactaccccgactgcgtcaaggtcttcgaggcacacgtcagcaccgccaagcaaaccgacgacctcctcgccttctacggctggtgcgacgacgtccgcctcgcccgcccggccgacttcgccgacgtcaagcgcatcgacgacaagctcctcgagacgctcgagcagttcgtgcgagagcgcggcagggcgggtcacagctcgccgcctccatggcagcagcagcagcagcaaactgcccagagcgacgagctcgacatgaacggcatcaaggcgctcccggcgccggagcatcacgccgctgagccatcgcgatcggcgccggagaaagttgcaccagaacaaatggcgccgccgccgccgccgccgcagactggcgacctcgtcgacctcagggaacccgtggtggaagacgagcaggagaacaagctcgcgctggcgctcttctccggcacggagaacggcgggtgggtggccttcccgtcggacgacgcggccgaggtgacgtcggcgtggcagacgccggcggcggaggccggcaaggcggagtgggagctcgccctggtggagacggcgagcaagctgtcgcggcagaaggcgtccatgggcggcgggctggacccgctgctgctgcacgggatgtacgaccagggcgccgtccggcagcaggtgggcgcgcacgaggcggcgacggggagcgcgagcagcgtggcggcgccgcgccgcgcgcccgtgctggcgctgccggcgcccgacggcacggcgcgaaccaccggcggcgacccgttcgcagcgtcgatgggcgtgccgccgccggcgtacgtgcagatggcggagatggagaggaagcagcagctgctggtgcaggagcagcagatgtgggcgcagtacaggcagggcggcatgcagggtcaggtcgccatggacaggctcgccgccggcgccatgccggtgcagtacgggatgcccatggcgtcggcgtacggtggctactactga</cdnaseq>

Protein Sequence

<aaseq>MSIRKALGAVKDQTSIGIAKVSAAIAPELDVAIVRATSHEDAPA EDRHVREVVTLTAHSRPYTAACAASLSRRLSRTRDYVVAAKCLALAHRLVADGDPHFR HELVRPAGRRGEPMLALLAEFRDEAHSASWDHSAFVRAYALYLDHRARFLISLLPAPR TVRFADETGSPPRGSTAATVQEMDTEALLGRALQLRQLLDRVLACRPSGGARQSRVVL ATLYPVVKESTQLCSDVAVVLAVLLDRFFDMDYPDCVKVFEAHVSTAKQTDDLLAFYG WCDDVRLARPADFADVKRIDDKLLETLEQFVRERGRAGHSSPPPWQQQQQQTAQSDEL DMNGIKALPAPEHHAAEPSRSAPEKVAPEQMAPPPPPPQTGDLVDLREPVVEDEQENK LALALFSGTENGGWVAFPSDDAAEVTSAWQTPAAEAGKAEWELALVETASKLSRQKAS MGGGLDPLLLHGMYDQGAVRQQVGAHEAATGSASSVAAPRRAPVLALPAPDGTARTTG GDPFAASMGVPPPAYVQMAEMERKQQLLVQEQQMWAQYRQGGMQGQVAMDRLAAGAMP VQYGMPMASAYGGYY</aaseq>

Gene Sequence

<dnaseqindica>73..1818#ggatgaacacctcgtcgcgagctcgccattgccactgcccattgctctgctcgctgctccatcgccggcgccatgtcgatccgcaaggcgctgggcgccgtcaaggaccagacctccatcggcatcgccaaggtctccgccgccatcgcgccggagcttgacgtcgccatcgtccgcgcgacgtcgcacgaggacgcccccgcggaggaccgccatgtccgcgaggtggtcaccctcaccgcgcactcccgcccctacaccgccgcctgcgccgcctccctctcgcgccgcctctccaggacgcgcgactacgtcgtcgccgccaagtgcctcgcgctcgcccaccgcctcgtcgccgacggcgacccgcacttccgccacgagctcgtccgccccgcgggccgccgcggcgagccgatgctcgcgctcctcgccgagttccgcgacgaagcgcactccgcgtcgtgggaccactccgccttcgtccgcgcctacgcgctctacctcgaccaccgcgcccgcttcctcatatccctcctccccgcgccgcgcaccgtgcgcttcgccgacgagacgggatcgccgccgcgggggtcgacggcggcgacggtgcaagagatggacaccgaggcgctcctgggccgggcgctgcagctccgccagctgctcgaccgcgtcctcgcgtgccgcccatccggcggcgcgaggcaaagccgcgtcgtgctcgccacgctctacccggtggtcaaggagagcacgcagctctgctccgacgtcgccgtcgtgctcgccgtcctccttgaccgcttcttcgacatggactaccccgactgcgtcaaggtcttcgaggcacacgtcagcaccgccaagcaaaccgacgacctcctcgccttctacggctggtgcgacgacgtccgcctcgcccgcccggccgacttcgccgacgtcaagcgcatcgacgacaagctcctcgagacgctcgagcagttcgtgcgagagcgcggcagggcgggtcacagctcgccgcctccatggcagcagcagcagcagcaaactgcccagagcgacgagctcgacatgaacggcatcaaggcgctcccggcgccggagcatcacgccgctgagccatcgcgatcggcgccggagaaagttgcaccagaacaaatggcgccgccgccgccgccgccgcagactggcgacctcgtcgacctcagggaacccgtggtggaagacgagcaggagaacaagctcgcgctggcgctcttctccggcacggagaacggcgggtgggtggccttcccgtcggacgacgcggccgaggtgacgtcggcgtggcagacgccggcggcggaggccggcaaggcggagtgggagctcgccctggtggagacggcgagcaagctgtcgcggcagaaggcgtccatgggcggcgggctggacccgctgctgctgcacgggatgtacgaccagggcgccgtccggcagcaggtgggcgcgcacgaggcggcgacggggagcgcgagcagcgtggcggcgccgcgccgcgcgcccgtgctggcgctgccggcgcccgacggcacggcgcgaaccaccggcggcgacccgttcgcagcgtcgatgggcgtgccgccgccggcgtacgtgcagatggcggagatggagaggaagcagcagctgctggtgcaggagcagcagatgtgggcgcagtacaggcagggcggcatgcagggtcaggtcgccatggacaggctcgccgccggcgccatgccggtgcagtacgggatgcccatggcgtcggcgtacggtggctactactgagcaagatggcatgatccgcgcgccattgatgagagttcaagttcgatcaagttgtgaataagaagtagtaatccgctcttgcgagattgattgggtttgattgattcgtaaagagaagcgatgagcgcttgtatacgtatactacgtttgcgatcgattatacagtgtacatgaaaacattactgataaaagattcagttttgatt</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0112101, RefSeq:Os05g0112101