Os05g0117864

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Revision as of 10:04, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0117864| Description = Similar to R kappa B| Version = NM_001187258.1 GI:297723646 GeneID:9268967| Length = 4159 bp| Definition = Oryza sa...")
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Gene Name

Os05g0117864

Description

Similar to R kappa B

Version

NM_001187258.1 GI:297723646 GeneID:9268967

Length

4159 bp

Definition

Oryza sativa Japonica Group Os05g0117864, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:925818..929976

Sequence Coding Region

926514..929879

Expression

GEO Profiles:Os05g0117864

Genome Context

<gbrowseImage1> name=NC_008398:925818..929976 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:925818..929976 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatcaggagacctttgcgcgcacgcttgccgagctacttaggggagacaacttccacttcgggagtccccttgctgccctcttcgacaggctcaaaggaggcctatgtgacccaaggattgctctttatcgccgcggtacccgctttgcagagcggcggaagcattactacaggctgcaaagctaccacaattccatggtccggggtctctgggacgtaaaggactgttggaagggttgccaggggtacaacattaacgagaagctaagggcactggatgccatgaaagcacagcaacagcagcagcagcagcagcagcagcagcaaaaagctcatcttggtttgggtggccgagctggatcagagactgactcggagagcagggagtatggggacccatccttgatgcggctgaagcctgataagacagtattgaagaaatcagggaagcctgagaaggagcggtctaagggtctgttgcgcttgggagcgccaaaaggtttgggcgaggagtacattggaggggctggccgtgatgctgctatggcactctccgagctttctcgccaagataacgcctatggctatgattcaggagtcatgcgcagagggaagcctcgcaggagtcagcaaggccttcattccgaggagttgggagatgacagggatttgcgaatgattcgttctcataggccaatgccgaagccaggaaagaaggaattggctgcaagctatgatggaaatttgtatggaaacaactaccacgagaaccaaaatggttcttcttactactatggcaggaatgccaatgctaatcagggagttaccgtagcagcagcatatgatcgtccatattttgatacagcaaagaatgcaaagtactctgacagagattggatgtatggtggacaaggtatgtcgagtaaagctctgaaaggggatgagatggattggccagctggtagctatgccggtagcatgaatgactggcagagagggcagtctgcaggcgattacaggagcagaaaaactcaagctggtcatggtctgaaggttaagtcttataaaagtattgagaaacaaattagtgatgcaaattttgggtctgatcatagaggcaagataccggggaagatcaaaggtaaatccactagtcagtatgacagaattggccagaagtactcgaggagcaatgctgtctacactcagagtgaggagacagaatccgattcatcggaaaagtttgaaggtggaggggacatggatcttaaaaggcagccagaacaccattctgggtctcatagaccagcatatagtgccaaaaaattgaacaagcttcctaaagcttccaaagtaaattatccaactgctactgaagattttgaaccctaccagagtaaagggactcacagagtaaatgttacagagtctgattatttacgtgatgtgcatgtcacagagacagaacagattagtgaaatgatgaggcctccagcagcaaggggtgaaagaaagcggaaagtaatggccagtgtcgatacacatgatcatggaaacactgagttgcctgacagcaatgagaatgctgatgaatcactcaggtcaccagagaatggtgagaggctagccagtggatcaggctgtgttgattctaatggtgatgttgaaaaaaagaagatgccattggcaagttgcagctctggatccaaaaagcagaaaagaagggttgaagctacaagcccggccgaacatggtgaggacgcgccatctgctccaaagttggtggagaacagcagtagctcaaagaagaaaggtaaaaagaagccagctgctccagaggctgtcacggatgcagttgttgtagatgaaccagctcctgtcttgccagaagtaaatgtggtagtggtagaacctgagaaaccaaagaaaaaatatgtaccaatcacaccaactatccacactgggttttcattctctattgtgcatcttctaactgctgtaaggaaggctatggccacccctactgaggatactctgtcggccaagcaacctgacggggaggagagcagaaaatgcttcaacaatgaagaacattgcaaaacgcctcaagatccaagtgcaacagagcaagcccaacagggtcatgaggctgtagatgccagtggtccagagaaagcccaacaaggtcacgagactgcagatgccagtgccgcagagcagaccacgccgagcaatttgccagcgttcaccgttcaagagattgttactcggattagatcaaatcccagtgaccctaatatacttgaaacacaagagccacttcaggatttagttcgaggagtattaaagatactctcatctagaacagctccactaggtgcaaagggatggaaagcactggtttcctatgacaagtcaaacaaaagctggctttgggttggcccactgccttctggttcttcagatggtgatcctaatgaagaaacttctcctgatgcatggggtataccacacaaaatgcttgtgaagttggttgacgcatttgctaactggctgaaaagtggtcaggaaacccttaagcagataggatcccttccaccacctccggcaccagatcctgcaaacttggatttgaaggaaaggttcaaggaccttagagcccagaaaagtctaaacacaattagtccaagctcggaggaagcaagagcgtatttccagcgtgaagaatttttgaggtactcaattcctgatagagccttttgctatactgctgctgatggggagaaatctatagttgctcccttgagaaggggaggtggcaagcctacagcaaaagctaggggacaccccatgctcttacctgatcgcccgcctcatgtcactattctctgtcttgtaagagatgctgctgccaggttgcctgcaagaactggaacaagagctgatgtgtgcacacttctcaaagattcacagtatctaaaccacgaagaatctaataaagaggctgctgttaaccaagttgtcagcggtgctcttgatcgtctgcattatgagcgcgatccttgtgtactgtatgacaatgacaaaaaattgtggacctacctgcacaggggtagagaggaggaagattttgaggatgatggcacatcgtctaccaaaaaatggaagagaccaaggaaagagtcggatcctgcagaccctggaaacgatgatttagaggatgatggtacccctactgcaagcgatgcgaaaaaacaaaagacagattctacagcatcaggagaagataaggatagtgaggatcctgcaattcaggacccttctgctggtgatttggaaggcgatcctgaccctgatcattag</cdnaseq>

Protein Sequence

<aaseq>MDQETFARTLAELLRGDNFHFGSPLAALFDRLKGGLCDPRIALY RRGTRFAERRKHYYRLQSYHNSMVRGLWDVKDCWKGCQGYNINEKLRALDAMKAQQQQ QQQQQQQQKAHLGLGGRAGSETDSESREYGDPSLMRLKPDKTVLKKSGKPEKERSKGL LRLGAPKGLGEEYIGGAGRDAAMALSELSRQDNAYGYDSGVMRRGKPRRSQQGLHSEE LGDDRDLRMIRSHRPMPKPGKKELAASYDGNLYGNNYHENQNGSSYYYGRNANANQGV TVAAAYDRPYFDTAKNAKYSDRDWMYGGQGMSSKALKGDEMDWPAGSYAGSMNDWQRG QSAGDYRSRKTQAGHGLKVKSYKSIEKQISDANFGSDHRGKIPGKIKGKSTSQYDRIG QKYSRSNAVYTQSEETESDSSEKFEGGGDMDLKRQPEHHSGSHRPAYSAKKLNKLPKA SKVNYPTATEDFEPYQSKGTHRVNVTESDYLRDVHVTETEQISEMMRPPAARGERKRK VMASVDTHDHGNTELPDSNENADESLRSPENGERLASGSGCVDSNGDVEKKKMPLASC SSGSKKQKRRVEATSPAEHGEDAPSAPKLVENSSSSKKKGKKKPAAPEAVTDAVVVDE PAPVLPEVNVVVVEPEKPKKKYVPITPTIHTGFSFSIVHLLTAVRKAMATPTEDTLSA KQPDGEESRKCFNNEEHCKTPQDPSATEQAQQGHEAVDASGPEKAQQGHETADASAAE QTTPSNLPAFTVQEIVTRIRSNPSDPNILETQEPLQDLVRGVLKILSSRTAPLGAKGW KALVSYDKSNKSWLWVGPLPSGSSDGDPNEETSPDAWGIPHKMLVKLVDAFANWLKSG QETLKQIGSLPPPPAPDPANLDLKERFKDLRAQKSLNTISPSSEEARAYFQREEFLRY SIPDRAFCYTAADGEKSIVAPLRRGGGKPTAKARGHPMLLPDRPPHVTILCLVRDAAA RLPARTGTRADVCTLLKDSQYLNHEESNKEAAVNQVVSGALDRLHYERDPCVLYDNDK KLWTYLHRGREEEDFEDDGTSSTKKWKRPRKESDPADPGNDDLEDDGTPTASDAKKQK TDSTASGEDKDSEDPAIQDPSAGDLEGDPDPDH</aaseq>

Gene Sequence

<dnaseqindica>98..3463#cgaccttgccggattgggcgacgtgctctcgctcgacgcgtggaacaccctgctgtccgaggaggagcggcaacgcctcgccgctctgctgcctgacatggatcaggagacctttgcgcgcacgcttgccgagctacttaggggagacaacttccacttcgggagtccccttgctgccctcttcgacaggctcaaaggaggcctatgtgacccaaggattgctctttatcgccgcggtacccgctttgcagagcggcggaagcattactacaggctgcaaagctaccacaattccatggtccggggtctctgggacgtaaaggactgttggaagggttgccaggggtacaacattaacgagaagctaagggcactggatgccatgaaagcacagcaacagcagcagcagcagcagcagcagcagcaaaaagctcatcttggtttgggtggccgagctggatcagagactgactcggagagcagggagtatggggacccatccttgatgcggctgaagcctgataagacagtattgaagaaatcagggaagcctgagaaggagcggtctaagggtctgttgcgcttgggagcgccaaaaggtttgggcgaggagtacattggaggggctggccgtgatgctgctatggcactctccgagctttctcgccaagataacgcctatggctatgattcaggagtcatgcgcagagggaagcctcgcaggagtcagcaaggccttcattccgaggagttgggagatgacagggatttgcgaatgattcgttctcataggccaatgccgaagccaggaaagaaggaattggctgcaagctatgatggaaatttgtatggaaacaactaccacgagaaccaaaatggttcttcttactactatggcaggaatgccaatgctaatcagggagttaccgtagcagcagcatatgatcgtccatattttgatacagcaaagaatgcaaagtactctgacagagattggatgtatggtggacaaggtatgtcgagtaaagctctgaaaggggatgagatggattggccagctggtagctatgccggtagcatgaatgactggcagagagggcagtctgcaggcgattacaggagcagaaaaactcaagctggtcatggtctgaaggttaagtcttataaaagtattgagaaacaaattagtgatgcaaattttgggtctgatcatagaggcaagataccggggaagatcaaaggtaaatccactagtcagtatgacagaattggccagaagtactcgaggagcaatgctgtctacactcagagtgaggagacagaatccgattcatcggaaaagtttgaaggtggaggggacatggatcttaaaaggcagccagaacaccattctgggtctcatagaccagcatatagtgccaaaaaattgaacaagcttcctaaagcttccaaagtaaattatccaactgctactgaagattttgaaccctaccagagtaaagggactcacagagtaaatgttacagagtctgattatttacgtgatgtgcatgtcacagagacagaacagattagtgaaatgatgaggcctccagcagcaaggggtgaaagaaagcggaaagtaatggccagtgtcgatacacatgatcatggaaacactgagttgcctgacagcaatgagaatgctgatgaatcactcaggtcaccagagaatggtgagaggctagccagtggatcaggctgtgttgattctaatggtgatgttgaaaaaaagaagatgccattggcaagttgcagctctggatccaaaaagcagaaaagaagggttgaagctacaagcccggccgaacatggtgaggacgcgccatctgctccaaagttggtggagaacagcagtagctcaaagaagaaaggtaaaaagaagccagctgctccagaggctgtcacggatgcagttgttgtagatgaaccagctcctgtcttgccagaagtaaatgtggtagtggtagaacctgagaaaccaaagaaaaaatatgtaccaatcacaccaactatccacactgggttttcattctctattgtgcatcttctaactgctgtaaggaaggctatggccacccctactgaggatactctgtcggccaagcaacctgacggggaggagagcagaaaatgcttcaacaatgaagaacattgcaaaacgcctcaagatccaagtgcaacagagcaagcccaacagggtcatgaggctgtagatgccagtggtccagagaaagcccaacaaggtcacgagactgcagatgccagtgccgcagagcagaccacgccgagcaatttgccagcgttcaccgttcaagagattgttactcggattagatcaaatcccagtgaccctaatatacttgaaacacaagagccacttcaggatttagttcgaggagtattaaagatactctcatctagaacagctccactaggtgcaaagggatggaaagcactggtttcctatgacaagtcaaacaaaagctggctttgggttggcccactgccttctggttcttcagatggtgatcctaatgaagaaacttctcctgatgcatggggtataccacacaaaatgcttgtgaagttggttgacgcatttgctaactggctgaaaagtggtcaggaaacccttaagcagataggatcccttccaccacctccggcaccagatcctgcaaacttggatttgaaggaaaggttcaaggaccttagagcccagaaaagtctaaacacaattagtccaagctcggaggaagcaagagcgtatttccagcgtgaagaatttttgaggtactcaattcctgatagagccttttgctatactgctgctgatggggagaaatctatagttgctcccttgagaaggggaggtggcaagcctacagcaaaagctaggggacaccccatgctcttacctgatcgcccgcctcatgtcactattctctgtcttgtaagagatgctgctgccaggttgcctgcaagaactggaacaagagctgatgtgtgcacacttctcaaagattcacagtatctaaaccacgaagaatctaataaagaggctgctgttaaccaagttgtcagcggtgctcttgatcgtctgcattatgagcgcgatccttgtgtactgtatgacaatgacaaaaaattgtggacctacctgcacaggggtagagaggaggaagattttgaggatgatggcacatcgtctaccaaaaaatggaagagaccaaggaaagagtcggatcctgcagaccctggaaacgatgatttagaggatgatggtacccctactgcaagcgatgcgaaaaaacaaaagacagattctacagcatcaggagaagataaggatagtgaggatcctgcaattcaggacccttctgctggtgatttggaaggcgatcctgaccctgatcattagctaaggtttgttgagaacagattgatctggaaattcttatcacattctttatatgtcccagcgataggtcatttacatctctgcattcctgagaattctgtattataacattattaggacaggaatgcttagcatagaaaactagatagagtgtgagaagcatgttttattttttatagcgtgcatcctcattaatattcccagtgtgatctgaaagggtagattctttagagagaaaaatgttccacgattatactggtagattttcatagagcatgtgttatcatagccatgctcttccttcatcacttatccccttggtgatggttcttcttgttttgcagggtataaagcagcatccagcgaccagctttcatgttgctgtattaatctatgtgttgacaccaccttatcagtgtatcaggcctcaattccgacacaatgttttgtagttgaaataggtttttcaacccgtgtttgtacattcacctcatgaaacaagctttcatagtttttctttctctagtggcatgcagatgtgctatgattttaattcaaatgcttgatcatatctgtgtccactccattcttgaataccatagtggcagacccatgcatcatgcatgtgcttcattttcaactgaagttcacttatgtacataattggtccacttcaattgacacgaaagaagattg</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0117864, RefSeq:Os05g0117864