Os05g0129700

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Revision as of 10:05, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0129700| Description = KNOX class homeodomain protein (Knotted1-type homeobox protein OSH71)| Version = NM_001061081.1 GI:115461892 GeneID:4...")
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Gene Name

Os05g0129700

Description

KNOX class homeodomain protein (Knotted1-type homeobox protein OSH71)

Version

NM_001061081.1 GI:115461892 GeneID:4337701

Length

6325 bp

Definition

Oryza sativa Japonica Group Os05g0129700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:1702558..1708882

Sequence Coding Region

1702907..1703098,1703186..1703436,1707582..1707720,1707841..1707963,1708153..1708383

Expression

GEO Profiles:Os05g0129700

Genome Context

<gbrowseImage1> name=NC_008398:1702558..1708882 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:1702558..1708882 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggatctgtacagcatccacccgggaatctcccgcggcggcggtgggggaggaggaggtgcggccagcgaggcgtccggggtcgccggaggggggagctcgccgccgcatcccccaccgccggcgacgacggcggcggcggcggatctgacggagctgatgaaggcgcagatcgccggccacccgagctacccttccctcctctccgcctacatcgaatgccgcaaggttggtgcgccgccggaggtgaccacgctgctggaggagatcggccgggaggggcgcggcggcggcggcggcgcgacagccggcggggaaattggcctcgatccggagctcgacgagttcatggagacgtactgccgggtgctggagcggtacaaggaagaactcacacggccgttcgacgaggcggcctccttcctcaccggcatccacacccagctcgcctccctctgtggcggcgcgccgccgcccaccgacaactccgatgaaatggtggggtcttcagaggatgagccgtgctcaggagacgccgatgcagcagattttgggcaagaacacagctcccgcttggctgaccatgagctcaaagagatgttgctcaagaagtacagtggctgcctcagccgcctccggtccgagttcttgaagaagaggaagaaagggaaactaccgaaagacgcgcgatcggcacttatggactggtggaacacacattaccgttggccttaccccacggaagaggataaggtgaggctggccgcgatgactggcctcgacccgaagcagatcaacaactggttcatcaaccagaggaagaggcactggaagccatcggaggacatgcggttcgcgctcatggagggggtcaccggaggatcctcctccgggacgacactgtacttcgacaccggcacaattggtccatga</cdnaseq>

Protein Sequence

<aaseq>MEDLYSIHPGISRGGGGGGGGAASEASGVAGGGSSPPHPPPPAT TAAAADLTELMKAQIAGHPSYPSLLSAYIECRKVGAPPEVTTLLEEIGREGRGGGGGA TAGGEIGLDPELDEFMETYCRVLERYKEELTRPFDEAASFLTGIHTQLASLCGGAPPP TDNSDEMVGSSEDEPCSGDADAADFGQEHSSRLADHELKEMLLKKYSGCLSRLRSEFL KKRKKGKLPKDARSALMDWWNTHYRWPYPTEEDKVRLAAMTGLDPKQINNWFINQRKR HWKPSEDMRFALMEGVTGGSSSGTTLYFDTGTIGP</aaseq>

Gene Sequence

<dnaseqindica>5785..5976#5447..5697#1163..1301#920..1042#500..730#aatctttgtttccatgtctgtctgaattctgatctcttcttctctctgcctgcagacacaagcaggtgactcctccatcctcccaaagcaaagcacccatgtatcccgctgctgccgctgctacctacaagtgcaccctgcagaagctgcttctccttctccttctgatctgaggagctgcagctgctgctccagcagcagaggctgcagtgcaatccgctgccaaattcctcttcttctccttcctactagcttttctcttcttcttcttcttcttcttggaaagctggaacttggagctgcttaagcttacacctgctgattcatctccagctgctgctgctgctgattcagtattattatgtgtggagatgtacagtagatgaggaggaaggaagtagctactggatagctagctgagctgagctaagctgagctaagcttcttggctaggtaggtagctagaggtgaggtgaggtgggggaagaggggattggacatggaggatctgtacagcatccacccgggaatctcccgcggcggcggtgggggaggaggaggtgcggccagcgaggcgtccggggtcgccggaggggggagctcgccgccgcatcccccaccgccggcgacgacggcggcggcggcggatctgacggagctgatgaaggcgcagatcgccggccacccgagctacccttccctcctctccgcctacatcgaatgccgcaaggtgtgttcgtccttgtccatgtccaattccgctcgcttcttcttcttcctctcctcctcctccttcggagctgcatgtggtagctagagctcaatcgccatgcatccaagaaagcataatttgatgatactttttatccgtgcttgttgcatgtgtgtgattcttggttcttgattaaatttttggcaggttggtgcgccgccggaggtgaccacgctgctggaggagatcggccgggaggggcgcggcggcggcggcggcgcgacagccggcggggaaattggcctcgatccggagctcgacgagttcatggtacgttagctcgtcggacgaacggctgatcagtcgattaatttcatcattgaataattggttggagcttgttattacatgtgattaatgatatatatctggaataaatggcgggagcaggagacgtactgccgggtgctggagcggtacaaggaagaactcacacggccgttcgacgaggcggcctccttcctcaccggcatccacacccagctcgcctccctctgtggcggcgcgccgccgcccaccgacaactccggtaaataaccaacaaattatatattgcttgcttcgccattgtgttttgcatcttcgatcgactgttgctagctaggaagaagatcgctcgagctaagtgcattattggattgcagatacattgcatggttgggtttggtgatgaatgcgtgcgtgcgtgagttcttgagaggtcaaatcgtgtccatgcaaatggggcacaggggtgtcagacgagtagtaaagcttcgtgtagggttttgtccaagcttctgtggagttggagtagcagcacactgccatagccatgcttctgtctcttctctctctctctctctctctctctctctatttctctcactgcaagtctatggaggagtagtcgctgcatgcctgctattatagactttgtgatggatggatggaacttgagagaggggagtgatgtgagttgagcttgcatggtggggaagtagctagtggcagtggcactgcttggattggatggctggctttgtgaaaagagaatcttgctcttgcatgctggttattactactagtgctgtagtagtggtgattttttttcctagctctggtgggtcaggtaaaaagattttgcatgctcctccttggttgcagcttcaatcacacaaggatttccttcaatttgcttgcagttaattacaatcgatatgtaatttgttttggtttgtttccatgcattatcttgtggtaatggaacctggagttgtgttaccccgtgcgaagaaacaaaaagatttgttttggattgggcatgcatttctgttttgtgctttttcaattctcagtttgatatattgcgcctaattatattctgtcaatttgacaatcacacaagattgtggcaggttgcacattttgatggtgtttgaaagttaccgaataaacccattgtcaatgtaatttaacccatatgctttaattttaggctcatttcgagtaaaaagtatcagagagtaacaaggtcctttctctttgagagatgaggctaatataacaagctcttagtttgaatgatgattatcaattaagccattataactaattaattaagctattatacatccacaactcacttgaaactgtgacatctacaaaatttcaggtgatcaagttttgtactgatgaacacaaccaaacacactgaagctagcttttggacatttcacatgtttagtataaagtcaaaaggacattttattattgagtgccataacactgttaccgtggaaatgtaaatactactccctctgttccataaaaaccaacttcttactacgactttgggcgtagcttactctcaggttcatagctagaagttagtttgttttataggacggagggagtaccttgcacaaacagtagcaactgtggtcaaaatagttcctgtcttcttttccttgttttcagtatgttttggaacaacaccgagtagaaatatgcatcttaattactagtacaaatcagaggagcgtgaaatatgatatttatgcaataaatgttaattgggcctggccccactaatctgtaaggaaaaacataaataatgatgttattttaactgcaaatgggaaaatacgattgcatgcatggtgtgcttgcttctcgggagcttaattatttcaggctttcagccacctggtattgctgagcagagaattaaagaaaacaaattaatataaaaaacttgcaagttgaagtaaaataattggttggaggtagctttcggtggtagcatatcataagtagctaaagccatgcaacaccctattttgttccatgtttagattttaacatattgatccactttgtaaatgatttgtttgttgcctctaggttcatactcaaagctcctttcgattggagaaattttataagaattctggaggatgttgttccttgggaaaattttcttatcagatccttcggaacaaaggaataggattgcaaaaatcctatgaatcgttttctttaggcccctagcccccattacataggaaaataaacgtgagctcatagatcttattttttacttttctttgaaaattctaatacgctccttttctctctcctctccctgcacatgtgattcctagttcacaaaatgcaaatgtatctgcttaaatttgatgtgatcacctacatattaccaactaattaaatggatgatcacatgcataactattggcactcggaaccattttgttgaacacaattatggattctaaaaaaactgaaacacatatatgatatatcccctaagaatatatgcataatacatactttgctcaggtttagcaaggtactaacattcttattctagtatagacaagctctgtttattaaatattctacagaagttgagaacaaatgacttcaagatagatgtaatgattagagctttcatgatttttgttcaaggatagtaaaaacggatgattgtatatcacttatggtggattggtggtgaactagtacttaatgtgttccaaaattaaaagtttagggagttattttagattaaaagtttagggacactactggtcaagcccagtagttatactagataggtgtaatgtatatgcatggcaaccttaattgtgtacctcaattcagatttattccaactatatgtcaaatattgtttttaattaattgggtggtctacttaattatggtgtcccttccagcaatagttattagggcatcatgtttgcaagcaggtgacatacaattcactgctaaagcataaatcacaatatatagttgaaatgtaagtactctccaaccttttcttacaatgcatatttcgatcagatatgtgtgatataagaagattatatggttgagtgaattgtagaaggaaataatcatgatatccttgttaatgccctgtggtattagagaccaaagttagtgacgcagtgtgagtgcttacttgtgaatgttgtagagaaagggaagataactgaggggaaagtaaagtaattaactttgcatgcctggcttatattttgaaacagaaccacaaaaattgtacttctgatttgaagctggaggggagcagttcttatgttacatttgatatcacttgaccaaaatggttctagccttaaaaatattgcatgagttactacactgaattgaatgaaatgagaccatgtagcttgtagatctcaagtaaagatatcatgaatccatggcataacttcagtagcttcatacaggaatcatggactaccattgcaagcagaactaaatgtcctgatgcacattttatggtcgaaaagaataattcttgataattgttaaagggtgcgctaagctaatactatgacctgaaagatggtttggcatggaacactgcatatttaatggaaatgagcaaaaaagattgacattgataaaatggtaacttaaaatgggtgatggaggattacgatggacaggggcacagtgcattatctgtgtcgttttcattcaaatgtttgtatttataagacttaatgatcatgttgcgggaattgcattcttatattctaaagtattcccacactgcgcagttctggtgatggattgtacttcatttttttagtgtttgttcaattgtattaaactggttttgatcctattttagacaagctgctgcatattccattgactcaccgtgtcaagtcataaaagaaaatattatccaacatttacgcaccgcaaatcgtagagaatatgtggatattcagcaatgtaacatctgactacatttgtttctgataatatcttgtccaatatagtgtaaggcaaaaaaaaaaaaaatcagcacttaagtaactctgtttgcctattcatgagataacttaagaagcattctgtctgtagcctccctaaacagcctgttattagtaattagtaagtctgatagttcattggttatggcactgcaaacagccgattctctggaatctcttcattatcttgcttactgatgattgggctcttgttcggtttgtgaagagactgctgcttttcatggttaatgttgtaatcctgccacataatctgagcttaattttatacatgacattttatttcaaactgcccctgatttgtaacatgtctatatgcaagatgaaatggtggggtcttcagaggatgagccgtgctcaggagacgccgatgcagcagattttgggcaagaacacagctcccgcttggctgaccatgagctcaaagagatgttgctcaagaagtacagtggctgcctcagccgcctccggtccgagttcttgaagaagaggaagaaagggaaactaccgaaagacgcgcgatcggcacttatggactggtggaacacacattaccgttggccttaccccacggtaatgtcgcgaaaacgccttttcgacacacaaaagcctctaacccacactgacctgggactctgtcttccaattgatctttcacaggaagaggataaggtgaggctggccgcgatgactggcctcgacccgaagcagatcaacaactggttcatcaaccagaggaagaggcactggaagccatcggaggacatgcggttcgcgctcatggagggggtcaccggaggatcctcctccgggacgacactgtacttcgacaccggcacaattggtccatgatcagattgcactccaaattaaatgtagcaccttgcaacagacattggcaggtattacctgctgctacaccctctgtgaggagcaagggatgatcatatattaaaaggaaaaaaagatgaaatcaatcaataacctcatcattttgtcgaaattattgtgtatatggtgttgtaagagggagttgggatgacctgtaaaaacttgcctgcattcagctaccataacattaattaattgtttgtatccctgacaactgcatccccagttaaaaccattttagacaggaaagagtgaactatgagtaatagtaacatgtagcaataataaagatacttattttttcccttgc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0129700, RefSeq:Os05g0129700