Os05g0134000

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Revision as of 10:05, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0134000| Description = Similar to Shaggy-related protein kinase eta (EC 2.7.1.-) (ASK-eta) (BRASSINOSTEROID-INSENSITIVE 2) (ULTRACURVATA1)| ...")
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Gene Name

Os05g0134000

Description

Similar to Shaggy-related protein kinase eta (EC 2.7.1.-) (ASK-eta) (BRASSINOSTEROID-INSENSITIVE 2) (ULTRACURVATA1)

Version

NM_001061099.1 GI:115461928 GeneID:4337722

Length

3804 bp

Definition

Oryza sativa Japonica Group Os05g0134000, complete gene.

Source

Oryza sativa Japonica Group 

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:1952072..1955875

Sequence Coding Region

1952503..1952585,1952686..1952788,1952959..1953042,1953130..1953225,1953302..1953352
,1953444..1953584,1953664..1953720,1953839..1953913,1953999..1954271
,1954378..1954437,1954552..1954644,1954724..1954843

Expression

GEO Profiles:Os05g0134000

Genome Context

<gbrowseImage1> name=NC_008398:1952072..1955875 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:1952072..1955875 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcctcggtaggtgtggtgcgttcttccttggggtttcagaacgaaacaagtacaagtggcgatgccgaccgacttccgaatgagatgagcaatatgagtataagggatgataataaggacattgacgacatagttgtcaatggcaatgggacagaacctggtcatgttattgtgacaagcattgatggaagaaatggacaggctaaacagaccattagctacatggccgagcgtgtcgtaggtcatggatcctttggaactgttttccaggccaagtgcctggaaaccggtgagactgtggctataaagaaggttcttcaagacaagagatataagaaccgtgagctgcaaacaatgcgagttcttgaccacccaaatgtggtgtcactaaagcattgttttttctcaaagactgagaaggaggagctttacctcaatttggtgcttgagtatgtgccagagactgctcaccgtgtaattaaacattacaacaagatgaaccaacgcatgccattgatatatgcaaaactatacatgtatcagatatgcagagctttggcgtacattcacaacaccattggcgtgtgtcacagggatatcaagccacaaaatcttctggtgaacccacatactcatcagctgaaattatgtgacttcggcagcgcgaaagtcttggtaaaaggagaaccaaatatttcttacatctgttcaaggtactacagagctccagagctcatatttggtgctactgaatacacaacagcgattgatgtttggtctgccggttgtgtgcttgctgaactcctcctggggcagcctctattccctggcgacagtggcgttgatcagcttgttgaaatcatcaaggttctgggtacccctacacgagaggagattaagtgcatgaacccaaattacaccgagtttaaatttccgcaaatcaaagctcacccatggcacaagatcttccataaaagaatgcctgctgaagcagtcgatctcgtctccaggcttttgcagtattcaccatacctccggtccactgcttcggaagcattgatccatcccttcttcgatgaactccgtgatccaaacacccgcttaccgaacggccgtttccttcctcctctcttcaacttcaagccccatgaactgaagggtatgccaatggaattcctggtgaagcttatccccgaacatgctcgaaagcaatgcgcgtttgtaggatggtga</cdnaseq>

Protein Sequence

<aaseq>MASVGVVRSSLGFQNETSTSGDADRLPNEMSNMSIRDDNKDIDD IVVNGNGTEPGHVIVTSIDGRNGQAKQTISYMAERVVGHGSFGTVFQAKCLETGETVA IKKVLQDKRYKNRELQTMRVLDHPNVVSLKHCFFSKTEKEELYLNLVLEYVPETAHRV IKHYNKMNQRMPLIYAKLYMYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLC DFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAIDVWSAGCVLAELLLGQPLF PGDSGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPAEAVD LVSRLLQYSPYLRSTASEALIHPFFDELRDPNTRLPNGRFLPPLFNFKPHELKGMPME FLVKLIPEHARKQCAFVGW</aaseq>

Gene Sequence

<dnaseqindica>3291..3373#3088..3190#2834..2917#2651..2746#2524..2574#2292..2432#2156..2212#1963..2037#1605..1877#1439..1498#1232..1324#1033..1152#ctccgaatcctcccccgcattccgcgccggagctgaggagggacagcgagccagcgagggaggtggggcaatccagcgagcgccagatcgtgccgccagccccgctccgtcctctctccggcgaccctccgccccgcctgatcccgtggtaaatccctctcgcctctgtttcttggatcccgtggttcttctctctgcttgttcttgcccgattcgacggttgacgcggccgtggttgctcttggatcgtggcttggttggatttttctttttcaaggggtggaagggaaagctggttctttttttttccttctttttcttttttttttttggtgtgtgtgttcgtttgttcttgtgattttcttgggggtggggaagatggtggcggtttccgaggtcggatcggatacttgttcgtcctgctgattttgcattttgatcggtgattctggtggctttcttctatttggatgatgcgtgtgattggagggagatgagttgatgggggaaagatggtttagtttggttgatgcaaaatttggtggtctctggatcggtgaaatgttcccttctcttggctgttatggatagcaagcatgggtggatgaactggttgattcttgaaagctaccgcctcgggataatctcccaatgatcgtggttgaaaatatcatgataaacggggggtaattggtacagattagcattctaatatcttcagattctgtgtttcgattgagctagaaaagtaacactccagttttgataacaactcggcatccatcatggattcccaaagtttcatttcttctttttttttcttttcctgtaccttcaagcctacctgccaattgccaacacaaactgtctgtgaatgtgcttctggcacctaatctcatcacatctttcttaagtaaaaacactgttgtgactttgacttaccattattatgctgttgtttgcaggtggatcaactacaactcatctttaggaaagcctcttgaacattagccttgtgtgcctttcaacagtatggcctcggtaggtgtggtgcgttcttccttggggtttcagaacgaaacaagtacaagtggcgatgccgaccgacttccgaatgagatgagcaatatgagtataagggatgataataaggtattatgcctaagagtggtggatcatagttgccttttgctgtattgtcagttgctgatttgattcacaaacgtcgcaggacattgacgacatagttgtcaatggcaatgggacagaacctggtcatgttattgtgacaagcattgatggaagaaatggacaggctaaacaggtactgttcacaaaacaagcacaagtgatattatgctgatccttttgtgtccatttagtgttgcctgggaacacaataagtttttgttcactgaattatctatctacattgcagaccattagctacatggccgagcgtgtcgtaggtcatggatcctttggaactgttttccaggtttgtctttagacagatcgatttatgttgcacttgttcagtgtgttaatttgtgtgttctggtggcgattgatgaacccttcatttcttgaatgatcttgtataggccaagtgcctggaaaccggtgagactgtggctataaagaaggttcttcaagacaagagatataagaaccgtgagctgcaaacaatgcgagttcttgaccacccaaatgtggtgtcactaaagcattgttttttctcaaagactgagaaggaggagctttacctcaatttggtgcttgagtatgtgccagagactgctcaccgtgtaattaaacattacaacaagatgaaccaacgcatgccattgatatatgcaaaactatacatgtatcaggtaacgttacacacctagatcttctaatctatcctagcacaattatgcattgagtataacatggaaaacctattataattgacagatatgcagagctttggcgtacattcacaacaccattggcgtgtgtcacagggatatcaagccacaaaatcttctggtatgttacatacttgcatttagttataatctgttttccacttattgaagctttgtggagttagtcaagtactaagttttgtttagtcagatggttgctaaaagattattacttccaggtgaacccacatactcatcagctgaaattatgtgacttcggcagcgcgaaagtcttggtatgatcactcattaccagatactcacacgaacattgccattgtctgttgtacctaatcttttgttctattattataggtaaaaggagaaccaaatatttcttacatctgttcaaggtactacagagctccagagctcatatttggtgctactgaatacacaacagcgattgatgtttggtctgccggttgtgtgcttgctgaactcctcctggggcaggtaagagatcacattatttacatgaggcttttggaccatccagctcattgcaactgtctgcctaagctttatcctttttttgttttaaaagcctctattccctggcgacagtggcgttgatcagcttgttgaaatcatcaaggtaaattatatcttgcttccatcgaaatcactccctttttgttgtttacctcctacttaactgactattctctcaggttctgggtacccctacacgagaggagattaagtgcatgaacccaaattacaccgagtttaaatttccgcaaatcaaagctcacccatggcacaaggtagaagaaaataatcttatgttggactgtttattttttattttagggttgaaacctaatgtagctttcctttttttttaccaccagatcttccataaaagaatgcctgctgaagcagtcgatctcgtctccaggcttttgcagtattcaccatacctccggtccactgctgtgagtgttgtcgttgcactatttgagccaacaccattttttagagaaagttttagttcttggcatcactattgtgttacatttttctaattacttcatcatacaaacatgcactgccttgccaagtactagtagttacagattgtgcatttctttatttgccattacagtcggaagcattgatccatcccttcttcgatgaactccgtgatccaaacacccgcttaccgaacggccgtttccttcctcctctcttcaacttcaagccccatggtaagcttgcaacaccggctgacatatgacatgcgtagacgaaaatttctgaaccaccgatcaacttataattatctactaatctggccgatttgaacagaactgaagggtatgccaatggaattcctggtgaagcttatccccgaacatgctcgaaagcaatgcgcgtttgtaggatggtgatttctgaggtcagcatgaaaactagttcagaatttcttcaccgtcctccattagaaagcagagatgaaccctgtgtgcagccatttgggaaagctggtgcatatggaagtggaactacatttttttgtccgagattctgacgccgcgtattcttttcccccctcccactttgctgctgccggtgtaaccaaaaaatcatccacggttctgtaaagttgatgaagaagagtgtaaaatcaggttgaaaactgaattcgatcggtttgtcaagattgtagcaacatgcaaggaaggatgttgcacactttgtatggcaatgttcgttcggtccaaatatttggacatggatcgagaggctattcatttaattgtacttgctgctacatgttcttacatatcagtaatcttctgagaagcttgtgaaagaaagc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0134000, RefSeq:Os05g0134000

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os05g0134000&oldid=13085"