Os05g0136900

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Revision as of 10:05, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0136900| Description = Transferase family protein| Version = NM_001061116.1 GI:115461962 GeneID:4337739| Length = 6284 bp| Definition = Or...")
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Gene Name

Os05g0136900

Description

Transferase family protein

Version

NM_001061116.1 GI:115461962 GeneID:4337739

Length

6284 bp

Definition

Oryza sativa Japonica Group Os05g0136900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:2121941..2128224

Sequence Coding Region

2122039..2122467,2127024..2127905

Expression

GEO Profiles:Os05g0136900

Genome Context

<gbrowseImage1> name=NC_008398:2121941..2128224 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:2121941..2128224 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggattcacggtgacgaggacgagcaggtcgctggtggcgccgtcgtcgccgacgccggcggagacgctgccgctgtcggtgatcgaccgcgtggcggggctgcgccacctggtgcggtcgctgcacgtcttcgaggccggcggccgcaacggcggcggcgagccggcgagggtggtgatcagggaggcgctggggaaggcgctggtggagtaccacccgttcgccgggaggttcgtggagggcgacggcggcggcgaggtggcggtggcgtgcaccggcgagggggcgtggttcgtggaggcgacggcggcgtgcagcctggaggaggtgaagctgctggaccacccgatggtgatccccaaggaggagctcctgccggagccggcgcccgacgtccagccgctcgacatccctctcatgatgcaggtgacggagttcacgtgtggcgggttcgtggtggggctcatctcggtgcacaccatcgccgacggcctcggcgccggccagttcatcaacgccgtcgcggactacgcgcgcggcctcgccaagccgcgggtgtcgccggtgtgggcgcgcgacgccatcccggacccgcccaggatgccggcgccgccaccgcggctggagctgctcgacctccgctacttcaccgtcgacctcagcccggaccacatcgccaaggtcaagtccgccttcttcgagtccaccggccaccgctgctccgccttcgacgtctgcgtcgccaagacatggcaggcccgcacccgcgccctcgtcgccgccgccgccgccgccggagacgacgaccaggagcgccgcaccgtgcgcgtctgcttcttcgccaacacgcgccacctgatgctcaagggggacggcgcggcggcggcggcgacggggttctacggcaactgcttctacccggtggcggcggtggcgagcggcggcgaggtggccggcgccgacatcgtcgacgtggtgcgcatcgtccgggacgcgaaggcgaggctcgccgccgacgtggcgcggtgggcggtgggcgggttcgaggaggacccctacgagctgaccttcacctacgactccctcttcgtctccgactggacgcggctcggcttcctagacgccgactatggctggggcacgccgtcgcacgtcgtgccgttctcctaccacccgttcatggccgtcgccgtcatcggcgcgccgccggcgcccaagctcggcgcgcgcgtcatgaccatgtgcgtcgaggaggcgcacttgccggagttcagggaccagatgaacgccttcgccgccgccaactag</cdnaseq>

Protein Sequence

<aaseq>MGFTVTRTSRSLVAPSSPTPAETLPLSVIDRVAGLRHLVRSLHV FEAGGRNGGGEPARVVIREALGKALVEYHPFAGRFVEGDGGGEVAVACTGEGAWFVEA TAACSLEEVKLLDHPMVIPKEELLPEPAPDVQPLDIPLMMQVTEFTCGGFVVGLISVH TIADGLGAGQFINAVADYARGLAKPRVSPVWARDAIPDPPRMPAPPPRLELLDLRYFT VDLSPDHIAKVKSAFFESTGHRCSAFDVCVAKTWQARTRALVAAAAAAGDDDQERRTV RVCFFANTRHLMLKGDGAAAAATGFYGNCFYPVAAVASGGEVAGADIVDVVRIVRDAK ARLAADVARWAVGGFEEDPYELTFTYDSLFVSDWTRLGFLDADYGWGTPSHVVPFSYH PFMAVAVIGAPPAPKLGARVMTMCVEEAHLPEFRDQMNAFAAAN</aaseq>

Gene Sequence

<dnaseqindica>99..527#5084..5965#cacacacacacattcaattcacatacaaaaactaagctagctaagctaagctaagcgagattatcacagtagctagctagctagctgaattaattagcatgggattcacggtgacgaggacgagcaggtcgctggtggcgccgtcgtcgccgacgccggcggagacgctgccgctgtcggtgatcgaccgcgtggcggggctgcgccacctggtgcggtcgctgcacgtcttcgaggccggcggccgcaacggcggcggcgagccggcgagggtggtgatcagggaggcgctggggaaggcgctggtggagtaccacccgttcgccgggaggttcgtggagggcgacggcggcggcgaggtggcggtggcgtgcaccggcgagggggcgtggttcgtggaggcgacggcggcgtgcagcctggaggaggtgaagctgctggaccacccgatggtgatccccaaggaggagctcctgccggagccggcgcccgacgtccagccgctcgacatccctctcatgatgcaggtatatatttatggattcaaattcagaatttttgaatttcctacaaagtttcgctagactttgtattcttataaaaaataataacgtaactaatctggatcgatgatcatattgctaactccatcctacaatatacgagattttatccatacagttatatggagtaaaaaacatatatattaattattgcatatgtagtgcccaacattataaagatttatatatgtaccgtctttactttaaataaacgggtggacatctacttatactacatcatcacataatatgtatgattttgtcaatataattagtataaagtcacttatattataggatggaggtagcatatatatattcgtatattgataactagctaagtggtatcatcatctacggaccattatatgatttggcgggagatcaattatagtagatttactgtctaatattaaaaagatttatgtatagccatctttactctaaattctagctatgctacttagggtctgtttgggagagcttctagctgctagaatttctcccagaattagaagctcctcagacagttcagcttttggtttagattctgagaagttgtacttgtatgatctagaaaataaactagaagccagaagttataggaaacctagctttttttagattctcaaaagctagctaccgactaactatttcttagaattttaagcaccccaaactaacccctaaactggttacaaagacatggcatgctttagcgcgttggatgcatgggccatgcatgcatatgcgttcttatatatatatatatatatatatatatatatatatatatatatatatatatctcctttggttgtgctacacgtggtgtgtccccatatgtagatgagatcgtggcatgcatcgatatcaacatgtacaactaaactattctcgatgatcactgatcactcactatcggggtaggtaagtcgatcaatcggatggctctctccatcttgcaatcttcgattccctttattttatttaatagtatacaataaagaaatatatatccacgtataccatataatcatttatcatacatgtgctgtttatgtgtctactcgtaaaagtgtgttctttttaattatatgctcaaaagatttataaatgatgaagaccatatatatatatatatatatatatatatatatatatatatatatatatatatatatgcaagtcatcaacacactgtacaaaattctcacaaaaattttcccatatatatgttcataaatcaatatcaggatttgataactctggttgatagagtcatgcaccagtaattttacccataaactatatataaaataaaatcgtggacaaatcccccactaataaactgtgttggtacactctagtaaataataaagaaatctggtggcctcccacagccacatattattgtgttgaagtcggtcgtcgatcacatataaaccaacaacaaaagggggccacacaaaaggccgcatattaatttatttccagttgattaacaaaatgaccctatatactatcttttcttgcttggtggaaaagaaaagctagaggtcagttaattataagtaaaatataattaatcacaccatgtgtcttgctgtgaacactgtactggaagaagttaggtacacacattatgtagtgctacgcactacgtgttgaaattaaatgtgctctgtttgcttgcacaacatccatttgtcaggcatgcagacaggcaacttatatgcgtgtatgcagctcaggcatcctctcgagaatccattatcatccatctctttcgcaacttcgcgagaagtgtacatgtacgtacccacactacaaaattagatggatcacctaccgcattatattagttacctctgtttggtaatgcatcttacactctcccatctgtttggtataaaacttttaatacatatctcaacgattcagaagtaaatacagtaaaataaactatgatgaaaactcacaaaatcaacttcaaaataaagtttaataatttaaattttgacttataaacatatataggcagtacatgttcaagattaataggtaattaatgttctttttagattgtggaatatttcgttaattactgaaacatctttcagtaaagtttgtgacgtgttgttatttgttgcatcaaaattatatgtgtatatttagtgttggaaaaaataatttcttatatatattaattgtagtacaaaaatggtattttaaagaccatatgatgtttagaacaatttctctctctctctctctcttttttgtcgtgttgagtaaattgtgaattaagcaatgagctagctagttaggttcaatgtttgtttgaagttaagacatttgtgtcactgggtcggccgaacactccaactaatcttatgcaaaactagctagtagcattttgcacgaattttgtcttagatactccactgtcttctcaaagtctttcgatcaattactttcaccagcttgtgtagcaaaagattgatttgtgccgaacatactttagcacacgaaccggccacacttggatcaaattaaagggccttttctctagctagtgttggattatatcatgaaccatgattattttgcttcaattttcaatcgagagagacttggcaagtactaaagatttaaaaaaattatatagctagtggataatccatgccagtggaaatgcaaaactagctacagttgattatgaccaggtatcgatcggtccaggatttttcaggtgggcgccgctggtatacctgaaactgtagaacaattaatactccctccttccctaaatgtttgtcaccgttgacttttttaacatgttttaccgttcgttttattgaaaaacttttgtgatatgtgtataactatatgtatacatcaaagtatatttaataataaatcaaatgatagaaaaagaattaacaattacttaaattttttgaataagacgaacggtcaaacatttttaaaaaagtcagcggcgtcaaatattttaggatggaggtagtatattctaactgagccttttttttattttaatttcactgcttgttctcaaataaaaaatggtatataattttcatgagattcatgaaaaggaaacaaagatcttctctcattgaatctagagttgccttgactaatagtagtacatgtggttcagtggatgtggaaagtttgttggtgaaaaggtaggctacacagtgggcaatagtaattttgacttagtgttcttttacgtccacagtcttcaacataggagtactaactttggtcatcattttgtagttacagtaaaatataagaataaaaatataatattatgaaaacatttttaacaacaaatttgtatagatcttttgttgagttaaagaaacatgggggtaaaggtagcgtggggtagcccttaatgtaggacgccgttgacttttcgaccaacgtttaaccattcgttttattcaaaatttttacgtaaatatgaaaatatttatgtcatgcttaaataatattgatgacgaatcaaatcacaataagataaatgataattgcataaattttttgaataagatgaatagtcaaacgttagataaaaaaatcaacggcgtcatacattaaaatatagaggtgtagtacattataggacccactagccactagagttaaaatcattccgtgcccgcaaatattactcgtgtactggtgcacttttaacgtaaggaatttagagaggatatatgggtggttctcgtctctttaaccttacatcaaacatgaccattcgcgtatgatatatgctttttttctctctctgtaatcgtggaaaaaagaaattcaaaaaacctgacggtcaagtggaaaagaattaatggagggcttcgttagtgcttaataagttgttgtgtcggtaaaagggacggtttaaccacccgcacgtaaggttgatgatcgatctacggactacgatccaacggttcacgatgcgtgatgcgatataccagtatgtgatgtgacaatgaacggtggttgctgcgtcgttactagatgatgctagaacactcacaatctcacttagctctcactaacaaagtgataagctctagtactatctacctaattagttagtgacaatcaccaacatttgattttaattacctaccaactcaattttcttcaaatccgttgaaaattgaatcgatatgtataaaattcagcaaaattacaatgaaatgaaattgagatgcccaggtagtgcagtgacagaagatatatggtttcaaaccctaaaattccgtgttcaatccaaaacatgcttaaattttctttttaaaaaatgtttggaggaagtctctcttttcaaatcctttttttacaaaaattacaatgacattgatcatgttaattatttttaaaaattgtttgtagggagtctctcccttcaaatcttgtttttttaaaaaataagaatgaaattgatcatgtgtgttttaaatttgcaggtgacggagttcacgtgtggcgggttcgtggtggggctcatctcggtgcacaccatcgccgacggcctcggcgccggccagttcatcaacgccgtcgcggactacgcgcgcggcctcgccaagccgcgggtgtcgccggtgtgggcgcgcgacgccatcccggacccgcccaggatgccggcgccgccaccgcggctggagctgctcgacctccgctacttcaccgtcgacctcagcccggaccacatcgccaaggtcaagtccgccttcttcgagtccaccggccaccgctgctccgccttcgacgtctgcgtcgccaagacatggcaggcccgcacccgcgccctcgtcgccgccgccgccgccgccggagacgacgaccaggagcgccgcaccgtgcgcgtctgcttcttcgccaacacgcgccacctgatgctcaagggggacggcgcggcggcggcggcgacggggttctacggcaactgcttctacccggtggcggcggtggcgagcggcggcgaggtggccggcgccgacatcgtcgacgtggtgcgcatcgtccgggacgcgaaggcgaggctcgccgccgacgtggcgcggtgggcggtgggcgggttcgaggaggacccctacgagctgaccttcacctacgactccctcttcgtctccgactggacgcggctcggcttcctagacgccgactatggctggggcacgccgtcgcacgtcgtgccgttctcctaccacccgttcatggccgtcgccgtcatcggcgcgccgccggcgcccaagctcggcgcgcgcgtcatgaccatgtgcgtcgaggaggcgcacttgccggagttcagggaccagatgaacgccttcgccgccgccaactagctacacatgcttatactatcatatcatgcacactagttaattatattaattacagtaattataatccttattagtattaattaatcatcaagagggacagtgcaattaattaagcattgtctcatgcaactctgatcgatcgatcgatcggtgtgtgtacgtaattcggctggttaataatggatttgcaacttccttcccccgcagtagacatatctagttaattgcgttgtgtaagagaaattatttttccttctaatatattgacttgtaattgtgttgcgcgttcacgaaaaataatggatttgcaagtagtatt</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0136900, RefSeq:Os05g0136900