Os05g0137400

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Revision as of 10:06, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0137400| Description = Similar to Aspartic protease precursor| Version = NM_001061121.1 GI:115461972 GeneID:4337744| Length = 4176 bp| Def...")
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Gene Name

Os05g0137400

Description

Similar to Aspartic protease precursor

Version

NM_001061121.1 GI:115461972 GeneID:4337744

Length

4176 bp

Definition

Oryza sativa Japonica Group Os05g0137400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:2152958..2157133

Sequence Coding Region

2153700..2154032,2154149..2154209,2154319..2154413,2154515..2154627,2154721..2154994
,2155366..2155479,2155612..2155676,2155768..2155909,2155990..2156109
,2156596..2156684,2156792..2156876

Expression

GEO Profiles:Os05g0137400

Genome Context

<gbrowseImage1> name=NC_008398:2152958..2157133 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:2152958..2157133 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccaagaggcacctcttgttggtgacaacttgtttgtgggctctgtcatgtgccttgctgcttcatgcttcctctgatgggttcctgagagtcaacctcaacaagaagagattggacaaggaagatctcactgccgccaagttggcgcagcagggcaaccgtcttctgaagaccggcagttcagacagtgatcctgtccctctggtggactacctcaacacccagtactatggggtgattggcctcggctcaccgccgcagaacttcacggtgatatttgacactggaagctccaacctgtgggttccttcagcaaaatgctatttttcgatagcatgctacctccacagcagatacaactcgaaaaagtcgagctcttacaaagcagatggagaaacttgcaaaattacatacggttctggggcaatttctggattcttcagtaaggataatgtgttggttggagaccttgtagtgaaaaaccagaagttcattgaggcaacacgcgaaacaagcgttacctttatcatcggaaagtttgatggaattcttggtcttggctaccctgaaatctctgttgggaaagctcctccgatttggcagagcatgcaggagcaggaactgcttgcagatgatgtcttctcgttttggctgaaccgagacccggatgcatcctctggtggtgagctcgtctttggtggcatggatccgaagcattataagggggatcacacctacgtccctgtttcccgcaaaggctactggcagtttaacatgggggatctccttattgatggccactcaactggcttctgtgcaaaaggctgtgctgctattgtcgactccggaacttccttgcttgctggtccaacagctatagttgctcaggtgaaccatgctattggggctgaaggaatcatcagcacggaatgcaaagaagtggttagcgagtatggagagatgatcctcaacttgctcatagcacagacagatccgcagaaagtatgcagccaggttggtctgtgtatgtttgacggtaaacgctcagtaagcaatgggattgaatctgttgtcgacaaagaaaacttgggttctgatgctatgtgttcagtttgtgagatggctgttgtgtggatagagaaccagctacgcgaaaataaaacgaaggagctgatattgaattatgctaatcagttatgtgagcgtctaccaagccccaatggagaatcaactgtcagctgccatcaaatctcgaagatgcctaatcttgcattcaccattgcaaacaagacatttattcttacaccagagcagtacatcgtgaaactggagcaaggagggcaaaccgtctgcatcagcgggttcatggcgttcgacatacctccaccacgcggtcctctttggattcttggagatgtcttcatgggtgcttatcatacggttttcgacttcggcaaagacaggatcgggttcgctaaatctgcatga</cdnaseq>

Protein Sequence

<aaseq>MAKRHLLLVTTCLWALSCALLLHASSDGFLRVNLNKKRLDKEDL TAAKLAQQGNRLLKTGSSDSDPVPLVDYLNTQYYGVIGLGSPPQNFTVIFDTGSSNLW VPSAKCYFSIACYLHSRYNSKKSSSYKADGETCKITYGSGAISGFFSKDNVLVGDLVV KNQKFIEATRETSVTFIIGKFDGILGLGYPEISVGKAPPIWQSMQEQELLADDVFSFW LNRDPDASSGGELVFGGMDPKHYKGDHTYVPVSRKGYWQFNMGDLLIDGHSTGFCAKG CAAIVDSGTSLLAGPTAIVAQVNHAIGAEGIISTECKEVVSEYGEMILNLLIAQTDPQ KVCSQVGLCMFDGKRSVSNGIESVVDKENLGSDAMCSVCEMAVVWIENQLRENKTKEL ILNYANQLCERLPSPNGESTVSCHQISKMPNLAFTIANKTFILTPEQYIVKLEQGGQT VCISGFMAFDIPPPRGPLWILGDVFMGAYHTVFDFGKDRIGFAKSA</aaseq>

Gene Sequence

<dnaseqindica>743..1075#1192..1252#1362..1456#1558..1670#1764..2037#2409..2522#2655..2719#2811..2952#3033..3152#3639..3727#3835..3919#gctgtatttatcgtctttgtcctcatctttctttcttgctttcctctaccttgactttggcttccccactctctcttcttcttgggaggctgggagctaccagcacaacacaccaaggaagctgaggtgagaacgattgattactttgctggctgctcttagctactactacaactgttttgtcttaatcggttgattacatctcatatttcatcggtttagctcgctctgttaagatttctcacctcctcttggatgtattattcatgtatatgttgtgtggtctggctaagtttttggtctgtcctgataaatgctgtttaaggattctttctttgttctttttttttatggacaaaatataatctttgtgccttactgtgaattgagtctgttggctatatcgttcccggtttattggactatagatgaacatgtaaccctatatgcggttgtgttttctccttacaaagatcagtagtacctaattcagctagttagaagtggtaccaaggctgtaaatttccatctttttctctgtgaggttcatttcccttttaatctctgtttcgtgagaaataccccactgtttgacttccagtaaatctgttctctatttctagttcagttaacctgctattattgattctacaatttaagcataataaagattaatgtctattagttttctcaattgatcatgtggcacgtattttagcaggtgcgttgatttcttgatatcatggccaagaggcacctcttgttggtgacaacttgtttgtgggctctgtcatgtgccttgctgcttcatgcttcctctgatgggttcctgagagtcaacctcaacaagaagagattggacaaggaagatctcactgccgccaagttggcgcagcagggcaaccgtcttctgaagaccggcagttcagacagtgatcctgtccctctggtggactacctcaacacccagtactatggggtgattggcctcggctcaccgccgcagaacttcacggtgatatttgacactggaagctccaacctgtgggttccttcagcaaaatgctatttttcggtgagttcctgtgttgcggattgatctatgtggttttgttttttaacatgaatgcactgtgtccacactactttctatgggactttgatgtctgatgtgaatgcactgcactgcagatagcatgctacctccacagcagatacaactcgaaaaagtcgagctcttacaaagcagatggtatgtatatctttttcttttcaagtagagtcttttaagtatgggtctcatttgtgcaccattcaagaggaattactgaaaatccccccattttctctcaactgttcaggagaaacttgcaaaattacatacggttctggggcaatttctggattcttcagtaaggataatgtgttggttggagaccttgtagtgaaaaaccaggtaattgaatgagagtaatagagtagtaattcttctttttagcatttatgtatcatattcctaatgctgcagttcttttccctcccatctggctatttcagaagttcattgaggcaacacgcgaaacaagcgttacctttatcatcggaaagtttgatggaattcttggtcttggctaccctgaaatctctgttgggaaagctcctccgatttggtacgttttcaagcaattttaagccaccatcatcgcctcagcggcatttcatagtcacctgtaatgtaccttctctcttctgtgcaacaataggcagagcatgcaggagcaggaactgcttgcagatgatgtcttctcgttttggctgaaccgagacccggatgcatcctctggtggtgagctcgtctttggtggcatggatccgaagcattataagggggatcacacctacgtccctgtttcccgcaaaggctactggcagtttaacatgggggatctccttattgatggccactcaactggcttctgtgcaaaaggctgtgctgctattgtcgactccggaacttccttgcttgctggtccaacagtatgtattattaatatcttcaaattaaggatccagatcgcctttatatttgtttgttcatggttactgagctcaaagtttccatgctaagataaagtagttgattggtcaaggtagatagttttcactgacatatacaaatatggagaataccgctaggtattgagtaaaataaaataaaaatgggaccaatctaggaaggattagattgattttgaattaaggagggggtgaggctcgaaccctgaccggctagctcgcagcttgcgttgctagccgggaagaccccggacctttatcattgagtatggctgtaatattgagcaatatggtgtgacttctaaaatctttgcaccttctgttatttccaggctatagttgctcaggtgaaccatgctattggggctgaaggaatcatcagcacggaatgcaaagaagtggttagcgagtatggagagatgatcctcaacttgctcatagcacaggtttgctaagctctttgctgtattttacagacttctgtgcgacctaagcatggaacagacgctgtgtcgtgattgtgttgtgtgagttactcttgaactctagtaatgtgctgatgttttgtgtctgagcagacagatccgcagaaagtatgcagccaggttggtctgtgtatgtttgacggtaaacgctcagtaaggttagttcattatctagtaattttccaatatacatggaactactcttttgaatatgtgatatgtattcttgtttggcaaaaatttctgcagcaatgggattgaatctgttgtcgacaaagaaaacttgggttctgatgctatgtgttcagtttgtgagatggctgttgtgtggatagagaaccagctacgcgaaaataaaacgaaggagctgatattgaattatgctaatcaggttactatcactgtgtccacactactttctatgattctcaaattatgtaattgctgacaaggttttgccttgcattccagttatgtgagcgtctaccaagccccaatggagaatcaactgtcagctgccatcaaatctcgaagatgcctaatcttgcattcaccattgcaaacaagacatttattcttacaccagagcaggttcgtgatagtctctcctagctcattttgccaatattagtcgggtctttttctttcagcatggtattgttttaggtaaatttttttgacgcatttgttttaggtaaatgatcgatcaaattattgtaccatttgaatcatgtgctttctacaaggtcaaacatctgctattgtttgtttaccatagatctcctgtaggatcctgatgcatttgaagttgtttactatttcaaacgtatgaagttaaatagtgaacttgatatttgcaatcatgaatatcatttgctgatttatagtgaatagtttgaatcaaaacctttttcaccatggtagtcaagtgaggtgattaatatatgaaatacgattggcctttttcgttcgctctcttcagttcttcctgcattgagatgcaaattttacctcaaattccttactgtccatagtcatcacatcattattaaattttctaacatttgcaatatgcagtacatcgtgaaactggagcaaggagggcaaaccgtctgcatcagcgggttcatggcgttcgacatacctccaccacgcggtcctctttggtacgcagcataacttatatgccaatacctggcctcattatcattctgtcttctgaatctccaaatttcgcatgaactcacaaaattttgcatgaactttgccacaggattcttggagatgtcttcatgggtgcttatcatacggttttcgacttcggcaaagacaggatcgggttcgctaaatctgcatgaagagtgtatgtagatcactcttcagatcacggagattagcctgtatatttcataagctgaaaccaaacatgtatggttttatgatatatagtagctagtacacggacaaacctctttggttgcttctttctgaagaaaaaagaagaacagacatggatgtatgatctacctgatgtgtataaattgaatgatgcagtctgagaaataatcctctgatcatattgtggattctgaaatatatccgagtttcttttttc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0137400, RefSeq:Os05g0137400