Os05g0140800

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Revision as of 10:06, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0140800| Description = Similar to Dormancy related protein (Fragment)| Version = NM_001061135.1 GI:115462000 GeneID:4337759| Length = 1446 ...")
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Gene Name

Os05g0140800

Description

Similar to Dormancy related protein (Fragment)

Version

NM_001061135.1 GI:115462000 GeneID:4337759

Length

1446 bp

Definition

Oryza sativa Japonica Group Os05g0140800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:2323436..2324881

Sequence Coding Region

2323681..2324466,2324537..2324848

Expression

GEO Profiles:Os05g0140800

Genome Context

<gbrowseImage1> name=NC_008398:2323436..2324881 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:2323436..2324881 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcgcgcgctttccctcgccagagcaagtagcccgccgcctcttcttcttcacctccgacgagcccttgcacccgcgtcgtcgtcttctccggcgccggtgctgttgctgcgtcctgcggtttcttgttcttctttgtttgttagcgacagggcggcggcggctcgccggagcagcggcagcagcaggagaagcatggcgtcgcagcagttcccgccgcagaatcaggagacgcagccggggaaggagcacgccatggatccccgccccgaggccatcatccagagctacaagccagccaacaagctgaaggacaaggtggcgatcgtgaccggcggcgactccggcatcgggcgggcggtgtgcctgtgcttcgcgctggagggcgcgacggtggcgttcacgtacgtgaaggggcaggaggagaaggacgcggaggagacgctccgcgcgctgcgcgacatcagggcgcgcaccggcgccaaggaccccatggcgatccccgccgacctcgggtacgacgacaactgccgcaaggtggtcgacgaggtcgccggcgcgtacggcggcgccatcgacatcctcgtcaacaacgccgccgagcagtacgagcgcccctccatcaccgacatcaccgaggacgacctggaacgcgtgttccgcaccaacatcttctcctacttcttcatgtcgaagcacgccgtgaagcggatgcgcgatcgccgcggcggcgccggcgccggcgggtgcagcatcatcaacacgtcgtcgatcaacgcgtacaaggggaacaagacgctgctggactacacggcgaccaagggcgccatcgtggcgttcacgagggcgctggcgctgcagctggcggaggaggggatccgggtgaacggcgtcgcgccggggccgatctggacgccgctgatcccggcgtcgttcgcggaggagaaggtgaggcagttcggctcccaggtgcccatgggccgcgccggccagccgtcggaggtggcgcccagcttcgtcttcctcgccagcgacgacgcctcctacatgtccggccagatgctgcacgtcaacggcggcgtcatcgtcaacggctag</cdnaseq>

Protein Sequence

<aaseq>MRALSLARASSPPPLLLHLRRALAPASSSSPAPVLLLRPAVSCS SLFVSDRAAAARRSSGSSRRSMASQQFPPQNQETQPGKEHAMDPRPEAIIQSYKPANK LKDKVAIVTGGDSGIGRAVCLCFALEGATVAFTYVKGQEEKDAEETLRALRDIRARTG AKDPMAIPADLGYDDNCRKVVDEVAGAYGGAIDILVNNAAEQYERPSITDITEDDLER VFRTNIFSYFFMSKHAVKRMRDRRGGAGAGGCSIINTSSINAYKGNKTLLDYTATKGA IVAFTRALALQLAEEGIRVNGVAPGPIWTPLIPASFAEEKVRQFGSQVPMGRAGQPSE VAPSFVFLASDDASYMSGQMLHVNGGVIVNG</aaseq>

Gene Sequence

<dnaseqindica>416..1201#34..345#acccccctcgccgcgccacgtacgccgcatcgcatgcgcgcgctttccctcgccagagcaagtagcccgccgcctcttcttcttcacctccgacgagcccttgcacccgcgtcgtcgtcttctccggcgccggtgctgttgctgcgtcctgcggtttcttgttcttctttgtttgttagcgacagggcggcggcggctcgccggagcagcggcagcagcaggagaagcatggcgtcgcagcagttcccgccgcagaatcaggagacgcagccggggaaggagcacgccatggatccccgccccgaggccatcatccagagctacaagccagccaacaagctgaaggtcagtttactacttgatttgctgttcttctccgttcatgtcacgttcatgtcgtcgttcgtcggtgcaggacaaggtggcgatcgtgaccggcggcgactccggcatcgggcgggcggtgtgcctgtgcttcgcgctggagggcgcgacggtggcgttcacgtacgtgaaggggcaggaggagaaggacgcggaggagacgctccgcgcgctgcgcgacatcagggcgcgcaccggcgccaaggaccccatggcgatccccgccgacctcgggtacgacgacaactgccgcaaggtggtcgacgaggtcgccggcgcgtacggcggcgccatcgacatcctcgtcaacaacgccgccgagcagtacgagcgcccctccatcaccgacatcaccgaggacgacctggaacgcgtgttccgcaccaacatcttctcctacttcttcatgtcgaagcacgccgtgaagcggatgcgcgatcgccgcggcggcgccggcgccggcgggtgcagcatcatcaacacgtcgtcgatcaacgcgtacaaggggaacaagacgctgctggactacacggcgaccaagggcgccatcgtggcgttcacgagggcgctggcgctgcagctggcggaggaggggatccgggtgaacggcgtcgcgccggggccgatctggacgccgctgatcccggcgtcgttcgcggaggagaaggtgaggcagttcggctcccaggtgcccatgggccgcgccggccagccgtcggaggtggcgcccagcttcgtcttcctcgccagcgacgacgcctcctacatgtccggccagatgctgcacgtcaacggcggcgtcatcgtcaacggctagtttttcacttgtcccatctcgccgccggcgggcgagctcgccgtcgccggccgccgtgtctgtcttggcttttgctgtgggcatgtgcccacgtgtttgcagtgcgagtccaccacgtgtcagtcagtagtagcttgtgatcctgtgatactgtgatgagtagagttgcagttgttgtctgtgtactaagcttgcaactcaatctgcaaggaagaagatgaataaaaacgtcccatctcatcgct</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0140800, RefSeq:Os05g0140800