Os05g0146100

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Revision as of 10:06, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0146100| Description = Peptidase, trypsin-like serine and cysteine domain containing protein| Version = NM_001061171.1 GI:115462072 GeneID:4...")
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Gene Name

Os05g0146100

Description

Peptidase, trypsin-like serine and cysteine domain containing protein

Version

NM_001061171.1 GI:115462072 GeneID:4337797

Length

10042 bp

Definition

Oryza sativa Japonica Group Os05g0146100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:2617060..2627101

Sequence Coding Region

2617394..2617440,2617590..2617661,2618214..2618282,2619023..2619110,2619230..2619307
,2619429..2619521,2619652..2619769,2624297..2624424,2624521..2624796
,2625761..2625915,2626000..2626143,2626434..2627010

Expression

GEO Profiles:Os05g0146100

Genome Context

<gbrowseImage1> name=NC_008398:2617060..2627101 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:2617060..2627101 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgcctggcgcagcgggagcggaggaggcttcggggtccgtgaagacccggtcgagcgcaaggcgacgccgcagtgtcaaccgggacggcggcagcggggtggtggcctcgctcgcatcccaatcggcggcgcgcgcggagcgatccgagaggcgatcagctaaaaggtcagcaactctggccgatcagagcagcgagggtgaaagggcagcgaagaagatggatttgggggtgcatgaggaggaggagggggtgaaggtggcgccgccttcagcgtctgcgtcagtagcggaggagcaacaagggggaaagggcggcgaagacgatggatttgggggttcagcaggaggaggagaaggtggcgcactggcgctgccttcagcgtcaggagtggaggaggggattccagtggaggacgaggcctcttcttgctgcagttctcctctccgtaagccatacataccccgtgttgtaattggacacaatgccatgggtagagagatctataagcctatcggaggtgaagacttcagggcacttgatccgtgggaagccaaataccaggcaaaaagagattgtcaaatgaaactgcccactttactcccatgcgtacctgacacatgccttactgatcggaacctcctccacattcgtgaatcatcgactaagactgttcttcatgctgcaaagtttgttgtgggtctttcgtctactatagatggcaagtcattatctaagagttctggtttcatgatcgattgggatgagaagagcaaaacaggcactattttgacatcagcccttcttatttgcaaacagtccccttctttagatgattggaaaagtgcaaaccagtatgcttctaatgctaaggttgcagttcgctttgtggatggtaccactgtggagggtcattttctatattgtcaggagcattacaaccttgctttctacaagattgtagtggacagatccatccatttaccctcctttaatgaaggagtgaaatgggctgaagaggtctttatcctgggaagagatgaaaattcgtatctgagaacaagctatggtagggttcagtatttgaatccacatatgaatgaacgccgtcactatgtatacattgatggtttcagtgcacctcctgagtattacaacgggggaccagtcattgacttaaggggagatgttgtgggcatgtctatccgcagtacaagagggtcttttattccttctaacatcatcctcaagtgcttgcagatgtggaggaagttccaatgcattcctcgaccacatcttcaaatgaagttttggggcatgaaatttcttaaccctgctcatcttgaggtgatatcttgcaagtgcaacattgatgagggccttatcgttaaagaggtgtcagaaggttctattgctgagaaacttggggttagagttggtgatgtcattaaattcttcaacggaaaacatatctcttctactgttgagttggaactactgttgctgcaaatatcagaggatcatttttacaatggaaatggccttgattccaaaatagatattgtgattggagtattccacacacgcagtggtgtttggagaagtcggaagttgacagtacatgtatccgacaaaggagaagttgttataagaggtgaatttcctgtcactagagagacaatttatgcaagatgtccacttgaccaagcagattcagatccagacaattctcaaatctctctcacagatcgaacatcgtcatcgtcatcgtcatcgtcatcatcatcagattcaggttctctccatgcccctacttctactgaaggaaggacacccacctga</cdnaseq>

Protein Sequence

<aaseq>MAPGAAGAEEASGSVKTRSSARRRRSVNRDGGSGVVASLASQSA ARAERSERRSAKRSATLADQSSEGERAAKKMDLGVHEEEEGVKVAPPSASASVAEEQQ GGKGGEDDGFGGSAGGGEGGALALPSASGVEEGIPVEDEASSCCSSPLRKPYIPRVVI GHNAMGREIYKPIGGEDFRALDPWEAKYQAKRDCQMKLPTLLPCVPDTCLTDRNLLHI RESSTKTVLHAAKFVVGLSSTIDGKSLSKSSGFMIDWDEKSKTGTILTSALLICKQSP SLDDWKSANQYASNAKVAVRFVDGTTVEGHFLYCQEHYNLAFYKIVVDRSIHLPSFNE GVKWAEEVFILGRDENSYLRTSYGRVQYLNPHMNERRHYVYIDGFSAPPEYYNGGPVI DLRGDVVGMSIRSTRGSFIPSNIILKCLQMWRKFQCIPRPHLQMKFWGMKFLNPAHLE VISCKCNIDEGLIVKEVSEGSIAEKLGVRVGDVIKFFNGKHISSTVELELLLLQISED HFYNGNGLDSKIDIVIGVFHTRSGVWRSRKLTVHVSDKGEVVIRGEFPVTRETIYARC PLDQADSDPDNSQISLTDRTSSSSSSSSSSSDSGSLHAPTSTEGRTPT</aaseq>

Gene Sequence

<dnaseqindica>9662..9708#9441..9512#8820..8888#7992..8079#7795..7872#7581..7673#7333..7450#2678..2805#2306..2581#1187..1341#959..1102#92..668#gaaatccccaactccaaaaattcctcgagtagaagtgcgagtttctccggcgatcgcaagcaagaaaccctaggcttccctccggcatgccatggcgcctggcgcagcgggagcggaggaggcttcggggtccgtgaagacccggtcgagcgcaaggcgacgccgcagtgtcaaccgggacggcggcagcggggtggtggcctcgctcgcatcccaatcggcggcgcgcgcggagcgatccgagaggcgatcagctaaaaggtcagcaactctggccgatcagagcagcgagggtgaaagggcagcgaagaagatggatttgggggtgcatgaggaggaggagggggtgaaggtggcgccgccttcagcgtctgcgtcagtagcggaggagcaacaagggggaaagggcggcgaagacgatggatttgggggttcagcaggaggaggagaaggtggcgcactggcgctgccttcagcgtcaggagtggaggaggggattccagtggaggacgaggcctcttcttgctgcagttctcctctccgtaagccatacataccccgtgttgtaattggacacaatgccatgggtagagagatctataagcctatcggaggtgaagacttcagggcacttgatccgtgggaagccaaataccaggcaaaaagaggtttatactcctttaatttcattctctttaatttcattctggtaaaaataaatgaaaacaatttacccggccaaataccaggcaaaaagaggtttatactcctttaatttcattctggtaaaaagaaatgaaaacaaattacctgcaagattttggggaaagaaaagaagggctatttatccgtactagattttgcaataaaaagaaaagaaaggaagaaaaaaggagttggcaatcatgcatttcttattagaactaacaggtgaaaattcttgctcttccctttctagattgtcaaatgaaactgcccactttactcccatgcgtacctgacacatgccttactgatcggaacctcctccacattcgtgaatcatcgactaagactgttcttcatgctgcaaagtttgttgtgggtctttcgtctactataggtaaacatcatcctattttattcatgtgcatttaagatttacaagtctcgctatttgattagtaatttgtaaatttatttttagatggcaagtcattatctaagagttctggtttcatgatcgattgggatgagaagagcaaaacaggcactattttgacatcagcccttcttatttgcaaacagtccccttctttagatgattggaaaagtgcaaaccagtatgcttctaatgctaaggtgagtttacataggaaattggcacatttgattcttctactttcacttatatgaggccataatgattttgtaaaaatatgttttcaagttaaatctagcatgtgttacttttagccatatacaaggccctatatcagtactaaattgtgggctaacttttttgcagtatttagagcatctgttaggtacttttgacataatttcgttttagttagtcttaattcaaagcagtttgaataactctcattagtcgtgtaagacgtggatattgccaaaagtgaagaaggaacatgctattgaagatgatgcaacatgtatctctcacaaggggggtggggacaaaataaactagatagatccttgtctgcacatccacacgcatcaatggttcccaacattaactagtactctgtctatggatgactcctataagggatgaaagaatataaatggaatacatgggcttggttataatgccattatttaactaaagcttggaactgggaggtactatatcatatcaaggttcctagttgcatattggataggatatgccagacttctctagaaaatacaggcagtaatgtaagcttttctcttaaatataataactagcatatttcctgtgccttgcaacatgattttaattaaagaaatttatcgttaacatgttattaccatctcttaattgttgttcatatttgttacttgcatatggacctttttagctccacactgttttttccttcccacaaaaaagtagttcgttggtggaattgtttggcatgtgggccctctaacctcacatgtcatttctctttcttaaaaaaaagttgggatttgttagcgggggtggtggaaccaccaccaccactcccttatataaggagtatagatttcaatctggtccgttttagtttctatgctctcacaaatataatgcaataattaactactatttcaggttgcagttcgctttgtggatggtaccactgtggagggtcattttctatattgtcaggagcattacaaccttgctttctacaagattgtagtggacagatccatccatttaccctcctttaatgaaggagtgaaatgggctgaagaggtctttatcctgggaagagatgaaaattcgtatctgagaacaagctatggtagggttcagtatttgaatccacatatgaatgaacgccgtcactatgtatacattgatggtttcagtgcacctcctgaggtaaaaatagattatgatactcattttttcctattatagtttcattttttttgtttgtggttaataatttaaatattgtcaatgtaaatattgtagtattacaacgggggaccagtcattgacttaaggggagatgttgtgggcatgtctatccgcagtacaagagggtcttttattccttctaacatcatcctcaagtgcttgcagatgtggaggaagttccagtatgtttttttttttatcctcaactgtcatgattttgctaagttaatttattaatagctgaatgggcgctgcaatagaaaagaattttattgaatgtgttattaagtgtgccagcttaatcgccatacactggacgttttcagagattgcttctttggtaaatttatgcaaatgttcatgtgtgtttcctgcataccaaatgtggcattatattatggctgaacacgatatatcattctaatttaaagaaatgcttagtgctttggtaactgatacatgaatgcatgatgactaatgagaagtggaaaaatgtacataattgatcaatgtatatatgcatggataactttgttttaatcttatgaaagtatggggaaaactatctaattgaaaagacatatagaccaaggatttgggtgtaacaagcatactacgcatgctgcctcctttccctagtcaatgtcaagaaacctgacatcttcacctaaaatctaaaacccgtcatatgtgctggagagcatgctagggactttacaatgttggattatcacttatctttaaatgctagtgctacagggagtaaatattcttattttggtagcattctgaattctttaactatggcatcatctcctttttgattagttggagaagatacaacctaaaaaatactgacgtagctgcaggtaaatgttaagtgtgttatgcaatctaatctaaagtagttaaaacagaatattttcatgcgctctcattaggccacgtaatcaactaaatagtaccattggataaaacaaaagaactaataccaaccgttggatacatagacatagatagacagttctagactcatagccaatgaaccaagttctatgagagccttcacaaaagttccaactgaagcctcgatctccaaacagcttgctagatcaaaatcaatgccccttttagtaattggaagtaagagagttcagagggatcgggaagagcagctagaagagagaattatttgtcttgcttgattttgaaatattacatttcataaaggaataagttcatctgaggtcccttaacttgtcaacgaatctgattttcgtccctcaaacggaaaacctgacacaatgggtccctcaactatcaaaaccggtgcatatgaggtcccttggcggttttgaaggcggttttggccgaggtggtgcctacatggctaatttgactcggtcttcatctgacgtggcgcttatgtggcaattcggttaggaaaaataataaaacccatgggacccacatgttagttccacacacaaaataataaaaaaaatgttgggacccacgtgggccccacatgtcatcctcgctccctctctctatcctctctctcccctcttctctctatcccttctctctctctgtccgatggagcagggcgagcggtagccggcagaagcgggcgacggcggggaggagcggctggccggcagagctgacatcgtttcaaacgtagctgagctgacatagttttacttggacatgccgccgttggagtggttgtcccagccccaggcgtcaaccacctcgccgccgacatcgaggccatcatccgcggggagatgtcccaccttcacgccgacatcgaggccatcaagggcagcatcgggtgggggaggaaggaggctagcgtggggggcggggaggccggactcccccgtgaccatcgcctccatctctgggtttcgcccaccgtcgcggccatcgcccggatacgccttcgacggcgtcgccgccgcaatgaagcaggccgagcccgtggtcactcaccaggttcgtcgccacctccctccctgcaccgctccatctgcgctctatggccctacgcgccgcggacctgacctagcccgccgtcggccgctgcccgccccgctccgccccgcccgtcgcccgcttctgccaaccgccgctcgccccgctccatcggccggagatatagagaagaggggagagagaggagggaggagtgaggagtgaggatgacatgtggggcccatgtgggtctcaccatttttttttattgttttgtgtgtggaactgacatggggtcccacgggttttattattttccggatcgaattgccatgtaagcgccacgtcagatgaagaccgagtcaaattagccacataggcgcgacgtcagccaaaaccgccctcaaaccgccgagggacctcatctgcactagttttgatatttgagggacccgttgtgtctggttttctggttgagggacgaaaatcggattcattgacaggttaagggacctcggatgaacttattcctttcataaatctgcctgacttataccttggacttgggctctaacaaacttaactcctattctattcttttctcctaaccagtgtttttaacaaaattctacaagaccacatacaaggaacatgtgcccaaccttgtacagctgactatgccatgtatgcgctacaaggtggggtgagggtgacagcgcgaaaccacgtaacgcttttttaaaacattgctcctaactgtgaagtgctgctgtatcatcccttctctgcatattctctgacagtccctgtgactctttgagtgctgctatatttttttctcgaaaacgcaggagagctgcatttcatttcattaaggggaagaaaaagcaatacaaaaaacacaacacaaagaaaaaacaaagtaggagtgcccgagccctcctaccaagacccacacacactagacaacccggggagcttagttgcctaggttaaccgtcccactaaggagcctttgaaggcgagaagctccagcaacaccccaaagatggccctcattttctatcacttgcaagaccgtcgctactctaggattggcgttattgaaaacgcagtcgttgcggtgcttccaaatctcccaagctactaatgttaccaaggaattaatccctttccgcacctccttcggctggttcttcgttgcttggctccaccacctcagaaagcggtcggtagagggctgaggcgcagcctcggctaaccctagtctcaaaaagattgccgtccaaacttggcgggaaaaaacacaagagatcaaaatgtgttggatggattcttcactttgatcacaaaggggacagatcactgtgtgctgcagcccacgtttagctagacgatcggctgtccaacacctattattgatggccagccaaatgaagaatttgcactggaggggagcccaacacttccaaatacgtttccagggagcaaaacgaatcgaacccaagaaataggcttcattagttgatttgcaagtgtaaatgccttctgcagtaaacttccaaacatgttgatcctggacatcttgtagcagtaccacctcttctactagttcccaaatggccaggtactcagcaagaacctggaccgaaagccccccttggatgtcagcaacccaacttctatttgtcaaagcttgtgccacagaacgttgctttcttgctcttttagggattaaggcgaaaagattgggggctagctcagcaatcgtctttccttgcaaccatctgtcactccaaaacttggtatgttctccatttcctaggatagttttgacagccacagctaaaagagagtggacattttttggcacattgatggataaaccagcccaaggcctagacgagtctgttttttgcagccaaagccatctcatgcgcaaagcccaccccatcttttcgagattaagaataccaagtccccctaaagacaagggtcgacacactcgatcccaagagaccaagcagtttcctccatttgcattgtcactccctttccataaaaaaccacggcgcctcttgtcaatggctttaagcacccatttaggaagatccagtgccatcattgcgtaaatagggatggctgaaagaaccgccctaacagctgtgagccggccagctttattcatcaaagatgctttccaacccgggagattgtctgctactttgtccactagaggcagcaggtcagccttggttggtttccgaattgtaagaggaagcccaagataattgcaaggaaagctggacatttgacaagacaactcattagaaattaacaccaaggggattagcatgaattgggcagtcagaacataagtgacatcattccttgaagcaatcccatattggtgttcctttcttgcgctttagcttgatgtagcagtggtatagcttgcagtgtaggctattgtcgtagcagtaatgtgtattgctgttgctgctgcatgagtcgaacccttctgacaactgtaataagtgtacagaagtacaaaataatatcacaccatcttgttctcgaattattcaagcctattcaaacaatatgctatgatctagttttgacagcttgtcaaaatctaggcatttaaaattgtcaaccttaatctctcgtttgaattttatgttctttttgacatctttaatgagacatgattatttgtacagatgcattcctcgaccacatcttcaaatgaagttttggggcatgaaatttcttaaccctgctcatcttgaggtgatatcttgcaagtgcaacattgatgagggccttatcgttaaagaggtatatattgtttactactacttactttaggactattgtttactgccacttttgttggggctttcatttgcttttcttgaaatggcttttcttattatattgtgaagtaaatatgttcaatttatcataggtgtcagaaggttctattgctgagaaacttggggttagagttggtgatgtcattaaattcttcaacggaaaacatatctcttctactgttgaggtaatatagtaaatatttgtaagtctcctataagaaaaacaaaagaagtaatattatgcgatattattttgttttacattcttgacattcatgtaatttcttattgttggttttgtttcagttggaactactgttgctgcaaatatcagaggatcatttttacaatggaaatggccttgattccaaaatagatattgtggtaagttcactttatgtttctaacacaaaaatgctttagttgtgtcatttatgccttaatatgacactgcaattagcaaaatattgactacgaggaatatattttattgaactttatagattggagtattccacacacgcagtggtgtttggagaagtcggaagttgacagtacatgtatccgacaaaggagaagttgttataagaggtacatgatgtcttttgagtctgtccttatttgataactatgctgagtgtttctaaacctgaggggtactttttttcagtggttttagatttaattgtagcccaattcaaatttgtaagctttacatgcatactgtgcactgcaccaatgcattacttccacgaaggtttctagaagattctaagatttgtatggtaggaatccatcagtatggaattttagtagattaggcatcattttagtgaataatcatgtgcaaaaaaaagggagctacaacttcatgtaatatgatcgggaagcatatgattcaaatatttcttggattagatgccctagagaatttggggttgatgccttgttgtgttctgttttaaaacataagtgaggccatatctctgagcacgtcgccaatgttttagttgaaattctagcatgaacttatcaaattttatttgtttgaccagataaatccaattattgtttgcgatattctttaaatgatttcaattatttgagcaacgcctgtgttatttaaacttaatatctactttccggagggaaatagagcaagtgaactgtcctaccttatgattctgagcacttatttataaatagttgtacattggacatacatgttgaatcttaagatgatatgcaataaacagcaaagagttacatgtgcatgttttctcccttacgtaaacacaaaagatttttcttaacagttttttatatcctaggtgaatttcctgtcactagagagacaatttatgcaagatgtccacttgaccaagcagattcagatccaggtagcaagttttgctttgtttgtaatattgtgatgtgaattacatgtagtggctgatgtcctgcaatttgcatgtgccttttgtaccatcaccggttagccaattcttgtacttgtgtcttctacagtttatggttatcaagaaactatgcaaatggtttcttgaatagttgaattgatttaaattgctttaaagatattgacgaaatgagctttcatgctgtcaattttttttttcagatgtagttagtttttgtaatactatttttttagcttaaaggaaatattgtttctcgacttcaggactcgaattaagagtacatataggagaaatataagacaaagcgttattgtaggactaaccttgatgttagacaaaatatttttgtaggactgaccttgatttagtattccacacaaaagcaataggatattgggtgatatgcaaatggtacattcttaggaatataaattggagtccagttggtgtttacttttcatcagttatatgggttataaataattctgatccaaaatgatgtttattgtccagacaattctcaaatctctctcacagatcgaacatcgtcatcgtcatcgtcatcgtcatcatcatcagattcaggtagggtatctttgactgaattgcctgagaagtgataagttctgctgctattcattgctgttgctatgtgaatgttaatactttatcttctatggaattgatgataagttgaatattcagtttgctgaaatgcagtattcatttcccaggttctctccatgcccctacttctactgaaggaaggacacccacctgatccaccataatctgatccaagattttaataacgtgtacatagatagtctcatcaaacactactggccatctcccacttatggtattaatcaacgtgtacatggatagactcattgtacgctgctggtcatctttccatctcccacttatggtattagtcaacgtgtaaatggatagactcattgtacgctgctggccatctttgttctgtcttccattttcttggagtgcgtcttttcttttatcctttttgggattccttaaccatatagatataactatctgtgaacatggagatgatgtccatgagcatgttctagcttttcattatgtcc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0146100, RefSeq:Os05g0146100